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brandcm/README.md

Colin M. Brand, PhD

Computational biologist working in human genetics, genomics, and bioinformatics at UCSF.

My research uses statistical and computational approaches to study genetic variation and its biological consequences, with interests spanning human genetics, population genomics, functional genomics, and genomic software.

Selected projects

  • annotate-dafs — Python command-line tool for annotating VCF files with derived allele frequencies using ancestral allele information.
  • AncientProxy — Computational framework for connecting modern genetic variants with ancient genomic variation.
  • Pan 3D Genome — Sequence-based machine learning and comparative genomics analyses of 3D genome evolution.

Pinned Loading

  1. annotate-dafs annotate-dafs Public

    Annotate VCF files with derived allele frequencies using ancestral allele information.

    Python 6

  2. AncientProxy AncientProxy Public

    Python

  3. Pan_3d_Genome Pan_3d_Genome Public

    HTML 1