Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
bactopia
/
bactopia-py
Public
Notifications
You must be signed in to change notification settings
Fork
3
Star
12
Code
Issues
0
Pull requests
1
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Actions: bactopia/bactopia-py
Actions
All workflows
Workflows
Dependency Graph
Dependency Graph
Release
Release
Tests
Tests
Show more workflows...
Management
Caches
Deployments
Release
Release
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Show workflow options
Create status badge
Create status badge
Loading
Uh oh!
There was an error while loading.
Please reload this page
.
release.yml
will be ignored since log searching is not yet available
20 workflow runs
20 workflow runs
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
transition to provider agnostic context docs
Release
#38:
Commit
c3f2e9c
pushed by
rpetit3
1m 35s
v2.4.2
v2.4.2
1m 35s
View workflow file
bump minor version
Release
#37:
Commit
cf66299
pushed by
rpetit3
2m 5s
v2.4.1
v2.4.1
2m 5s
View workflow file
more testing changes
Release
#36:
Commit
cd3bb34
pushed by
rpetit3
2m 40s
v2.4.0
v2.4.0
2m 40s
View workflow file
update changelog
Release
#35:
Commit
2f03a41
pushed by
rpetit3
1m 56s
v2.3.0
v2.3.0
1m 56s
View workflow file
template updates, search fallsback on SRA now, bump version
Release
#34:
Commit
63e6099
pushed by
rpetit3
1m 46s
v2.2.0
v2.2.0
1m 46s
View workflow file
just fmt
Release
#33:
Commit
f850b77
pushed by
rpetit3
1m 40s
v2.1.6
v2.1.6
1m 40s
View workflow file
bump version, fix bactopia-prepare using old header format
Release
#32:
Commit
bad08bb
pushed by
rpetit3
1m 57s
v2.1.5
v2.1.5
1m 57s
View workflow file
bump version for 26.04 changes
Release
#31:
Commit
9c2216f
pushed by
rpetit3
2m 9s
v2.1.4
v2.1.4
2m 9s
View workflow file
bump version
Release
#30:
Commit
5b37033
pushed by
rpetit3
1m 43s
v2.1.3
v2.1.3
1m 43s
View workflow file
bump version to 2.1.2
Release
#29:
Commit
f8bda6e
pushed by
rpetit3
1m 39s
v2.1.2
v2.1.2
1m 39s
View workflow file
bump version
Release
#28:
Commit
4d9e812
pushed by
rpetit3
1m 52s
v2.1.1
v2.1.1
1m 52s
View workflow file
add sysinfo command to help set max_memory, bump version
Release
#27:
Commit
5aa358e
pushed by
rpetit3
1m 52s
v2.1.0
v2.1.0
1m 52s
View workflow file
fix bactopia download and catalog, bump version
Release
#26:
Commit
a1590cb
pushed by
rpetit3
1m 28s
v2.0.2
v2.0.2
1m 28s
View workflow file
bump version, fixdepends bugs
Release
#25:
Commit
beee1b8
pushed by
rpetit3
1m 50s
v2.0.1
v2.0.1
1m 50s
View workflow file
update changelog
Release
#24:
Commit
394ace1
pushed by
rpetit3
1m 47s
v2.0.0
v2.0.0
1m 47s
View workflow file
add bactopia-workflows, add bactopia-merge-schemas, adjust download f…
Release
#23:
Commit
ccfbea5
pushed by
rpetit3
1m 49s
v1.7.0
v1.7.0
1m 49s
View workflow file
bump version
Release
#22:
Commit
14d49ab
pushed by
rpetit3
1m 33s
v1.6.1
v1.6.1
1m 33s
View workflow file
fix missing import in bactopia-prepare
Release
#21:
Commit
b5b843a
pushed by
rpetit3
1m 27s
v1.6.1
v1.6.1
1m 27s
View workflow file
make ncbi query optional in bactopia-search, fix issue related to mis…
Release
#20:
Commit
7ebb18a
pushed by
rpetit3
1m 32s
v1.6.0
v1.6.0
1m 32s
View workflow file
fix ena metadata parsing
Release
#19:
Commit
d74cc19
pushed by
rpetit3
1m 29s
v1.5.1
v1.5.1
1m 29s
View workflow file
You can’t perform that action at this time.