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LeBlanc_Palakurthi #3

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23449b2
Moved file for ease of use
PatrickLeBlanc Nov 14, 2017
77667d1
Almost completed - formatting slightly wrong on fasta files
PatrickLeBlanc Nov 14, 2017
2035b7c
Challenge Part 2 Completed
PatrickLeBlanc Nov 14, 2017
544ba48
Challenge Part 1 Completed
bpalakur Nov 16, 2017
aee992a
Challenge 1 modified version
bpalakur Nov 16, 2017
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58 changes: 58 additions & 0 deletions ChallengePart2.R
View file
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Original file line number Diff line number Diff line change
@@ -0,0 +1,58 @@
rm(list=ls())

#load string package
library(stringr)
library(seqinr)

#Scan in files
fasta=scan(file="motifsort.fasta",what=character(),sep="\n")

#Set mofits
motifOne='AKKPRVZE'
motifTwo='AAQWWRNYGG'

motif1Names=vector(mode='list',length=11)
motif2Names=vector(mode='list',length=13)
NoMotifNames=vector(mode='list',length=66)

motif1=vector(mode='list',length=11)
motif2=vector(mode='list',length=13)
NoMotif=vector(mode='list',length=66)

a=1
b=1
c=1

for (i in 1:length(fasta)){
if (str_detect(fasta[i],motifOne)==TRUE){
motif1Names[a]=fasta[i-1]
motif1[a]=fasta[i]
a=a+1
}
else if (str_detect(fasta[i],motifTwo)==TRUE){
motif2Names[b]=fasta[i-1]
motif2[b]=fasta[i]
b=b+1
}
else if (str_detect(fasta[i],'sequence')==FALSE){
NoMotifNames[c]=fasta[i-1]
NoMotif[c]=fasta[i]
c=c+1
}
}

for (i in 1:length(motif1Names)){
motif1Names[i]=str_replace_all(motif1Names[i],">","")
}

for (i in 1:length(motif2Names)){
motif2Names[i]=str_replace_all(motif2Names[i],">","")
}

for (i in 1:length(NoMotifNames)){
NoMotifNames[i]=str_replace_all(NoMotifNames[i],">","")
}

write.fasta(sequences=motif1, names=motif1Names,file.out="motif1.fasta")
write.fasta(sequences=motif2, names=motif2Names,file.out="motif2.fasta")
write.fasta(sequences=NoMotif, names=NoMotifNames,file.out="NoMotif.fasta")

@araiho araiho Dec 6, 2017

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Interesting approach. Very creative! Could also have:

library(stringr)

inFile=scan("motifsort.fasta",sep="\n",what=character())

motif1=file("motif1.fasta",open="w")
motif2=file("motif2.fasta",open="w")
other=file("nomotif.fasta",open="w")

for(i in 1:length(inFile)){
if(str_detect(inFile[i],">")){
seqID=inFile[i]
}else{
if(str_detect(inFile[i],"AKKPRVZE")){
writeLines(seqID,motif1)
writeLines(inFile[i],motif1)
}else if(str_detect(inFile[i],"AAQWWRNYGG")){
writeLines(seqID,motif2)
writeLines(inFile[i],motif2)
}else{
writeLines(seqID,other)
writeLines(inFile[i],other)
}
}
}

close(motif1)
close(motif2)
close(other)

132 changes: 132 additions & 0 deletions NoMotif.fasta
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,132 @@
>sequence3
GAFNAMFDYHGCWHKDAAATGSLCFDGRFIELYAVEAPRAHLALLDRVKRDVPPFWDPAALAEFIDKYGTHVIAGVKMGGKDVVCIKQLKGSNLTQSDVQSRLKKLSDDKLAQDSPESLTARDDKFLLGLNGSLLLGPGSAAWRSFRPSVVSHKDDILSIHIRRGGVDNGQGHSNWLSTISGSPDVISMAFVPITSLLTGVRGCGFLNHAVNLY
>sequence4
GLFNSCFDFGSDSWASDAGDTRCLAFDGYFISLLDLRLDCRPLALAGHVVADVPAAWDPSAIASFIEKYGTHIIVGLSMGGQDVVYVKQDKSSPLSPSVIKEHLDKLGDQLFTGTCTLPPSHCKSRDHKFKVPEAFNVFDAQMTRQRIEGMTAPMSCKEGVTVIYSKRGGDTAASNHSEWLPTVPLMPDAINFKLVPITSLLKGVAGVGFLSHAINLY
>sequence5
KAITNDIYIPAEFAACEFSLKSGKSSLYSSHINPGQLIFGQGSDTLHHTSNTHQLPLPPNALGEANIGKLYVSIVEYLRGCQDGAGQPNEPLVVFTSTELVPVVRGCFRYLESDSDELQENIEVYDIQYLFYVLKKEVMDIADLPNEHINKSITDNLFVNDFFEYHSGISCQFHEDNDRGKYCTQSKVARWCYMFSDYMCGDLAIKPLPGKHMPPKQEP
>sequence6
KLAEYSMEKTKNDKFSFASQSTSCVFYRSYRLSSSPTLSQEFRKAVRGLPKTYSPENKLKFYRLIDTFGTHYITKVKLGGEVQSVTSIRQCQASLQGLSTEEVQMCLEAEASATIKATVKTELKHCKKDTEKMESKSSFSSLFNDRFTEIKGGQTTEPDLLFSSDKDPSAYKEWLNTLPLIPDIISYSLNSLHELLPTSCPVRKDLRSAIRHY
>sequence7
NPFSASIPYKGYFTDLEIKKRKYIVAENTCLHSYATYSLRESIKNINSDFLLDTENLPILSKSITEKTCSKLIYMYNSKNDQCIKFIKPWIDFFRKYGTHVIVSAHFGGKTINTLEVPIHKFEELKIYNYKYPIENNRYLNVFKDRLLLQKILKIEKGEYAYRGGSQDNYMEDEQAEKNNDNLEKKANDVLNKYENSTSNKINLDIKGGTKLNEDWKQLTYEKWRNSIYTNIAPIYLDLFSLSSFMHIEKKESYNNALLYY
>sequence8
YSFSASAGYKNALKKLKIQNSIIFMMKIYCLRYYTGISTTTNTWEFTNNFRNALNKLPNTFDGLKEDNECTYEYYITKSHSPQCEKNVNKWMTFFKLHGTHVAHEMYLGGKIIIKVNIEKEEYNKMKETNLDMKTVFDFYFHKMGLSARKNRRIQKFINKMHGSKTVSILGGHPGLNIDDPSFFEKWINSIDKNSMPIRTKLLPFSFFMDDPNMIKAYNDALMFY
>sequence9
QFSEKIFPIEIGISSYSLKENKEIASYHKLLYPGKFKNVFARTQMIHGIDARDPRLEQNYSLVCIELIKYIEQFPGLAFFVSKEESLAGDKKCIDEIFLRGNVPIPKQIRFITHIQLFDYWCSIQHIELHEKSSFILNHIFKQLECAERCEYHKKINQKYHCALSDARHTSLMELICMKSYGATIIGSDTLPSVKFV
>sequence10
AKYSKSVKKLRRVSGKSYSFVRAKAQLELAQYMLKSNDLMLHPEFLHRLRALPLSYVYGEYRQIFQDYGTHYITEAALGGEFEYTIILNKERLEQSDYTLEDYKKCAQAGLKVGANIYGVYVSAGVHGGSCNGLLNEMGENTARGSMVEDFVSVVRGGTSESITALLSKKLPTPELMRLWGEGVQFNPDFIRRTTQPLYELVTSRDFSQASTLKRNLKRALSEY
>sequence13
VLGGSRSDLAKFARSQHSVDKATFAIHEISCTYYSYRLADHPQLSAEFTKYLRRLPQRVQTKQDRGPYRRLIDTYGTHYIHQVQLGGKVRRITAFRTCLATLKGFAETDVKTCLNAELRMSLGFLPANVTLSNKCDNLLKGNMSMGFYQGFMTHKIEVIGGERYFPDILYQQDPSEAYDSWMNSLHDNPDVISYAIFPLHQLVPDSQIAANLRDAITEY
>sequence14
YSKNKSVQRLRQYSETKDKTYMRVSGTVQLASFQMRTRGAMLSPTFIEDIKSLPRDYDKAEYFSILEMYGTHYTVSGTVGGKYDLVYVLDSIVMKSLDITTEDVTDCLKLNAGANIGGTENGAKVDVNPNVKTDICNKGGGETETEPRRTQKPVIESIISFVDGGSVEYVTALEEKLNKKEPVADVDDYIQWASSLKDSPTVINSKSNPIISLIPTDIKDAYIKTRNLERAIEEY
>sequence15
GSQESEFFHNVTHYKSTDLGFVRLWSKVETAHFKMRSDKLMLHEDFYISLMDLPEQYDFGMYSRFFNTYGTHYVTQGTMGGTLEYALVLNKTKMAESKLQGEQAGRCFSASIGLSYPIGQGASVDLKLGVNPCSKDGTFNQGSDASSVMVEDIITLVKGGILDSTSGVMVVRNPETYRTWGASLKYNPTLIEHEIMPIYELVRFSTAADHVGARLANLRRAWDEY
>sequence16
TDICTVPVEICIKPTLLNGTINIECFQTIINQPIPIQHFLNSKHYTDFEHGISQENNPVPQTDFDFLWKKINTFIKSNMSKYSDSSMLPIIICTPFISSVQCVEFLASQAKVSDVRRSIFNTMFSVDDFVECVNRFKEIIPNTNAIYNFYKPLVCWTCNNDFKCDFHKSNGTRTFCCSKTNSEYLASTLCDLYKTIKSKIFVASMPSQV
>sequence17
DRRKFHKTVTESRAHRLIILKNKVELAQFQNTAPEYLTLAEGFWRALSSLPTTYDYAAYRQLFQTYGTHYFSEGSLGGEYQALLELTQHALATTSTTSREYERCWRKVKRRFLRKKVKTVCEKLTSSTAASYVTPWSPGTSMRNVPIKVDVVGGNPGLKRFLSILDLENPEENGRKYDDWASSVKDFPQIIEQKVRPLYELVKEVECAGLKKLHMKQALEEY
>sequence18
VNYEHKLENKSLNKLLTKNNLSIKKINCSIHTSGMIISYQWKLKKSISILLNDIQNKLVKDSGHTSNSNPQKNQKNIEKDWYNIFNTYGTHVLTKITLGGKIIEINAVEGGQNITENTSIFGSKLDINFFKMSLNSNSKDKLHDLDKNKSEKIIILGGNAMTTDRKTTNNNGEINYDKKLDKQKWVETIKYNPVPIKFELTPLSYFIYQNFSDENLVNSFHYF
>sequence19
HGDMPSLCEQRYVPCEIACVRYSLREGILGSFHDFIDPGELPRGFRYHCQSGSASTHQIPISGFELANSDYHNMFRKLCSFVCPTPCPVVPVYTKANDIYRVDWCLQWLANKAGMENHFRVQEVETLIIKFYQDKLQEEPSRPTVSRLLDVVQWDYSSNTRCKWHEDNDMWCCALASCKKIAYCISKALASVYGVTLTPAHLPNPERS
>sequence20
VSLSGEYVPAELAIIKYSLNDGVMDSLNVLINPTDLPLGMALDAKTHSSSTHQLPVPPDALGEANYEKILRQILKFFKNTSGSKVVPPIFTWNKDIPMVDSILRGILEATDLDYVKFSILPLIDFFYNLKLATEDYGLDIKTFPSIHLAKALLEKDVYAYTAGIACDVHEQLNNQVACALSRVVRWAYVISDSCCLDVGIEMEKGRHLPHNMTT
>sequence21
FSFSASTGYKNFVKSTATNKVRTYITKTYCLRYVGGIVDYHSLDTTDEFKKAVEALPDKFDSHSCTIETFKSNEDDSICAETVLPWMQFIKMFGTHFTTIVHLGGKITHQVQIDKSDVLHMQQNGINVDAAVKASISPVMVDSLQGGFASTSEKASLSQSNNLKYDKQVLVIGGDGLVDSKNANSLNNWAKELYKRPMPIKIKLESIKSLLGKKRELFDEALKFY
>sequence23
SHSRSSQFASSHSRKDKFSFTTHNLKCSYYTFRIHSRPPLSKEFEESLKNLPSTYDHKNTSAFTQFLSVYGTHFIRRVRLGGHVNSITAIRTCQASMSQMSVQTVSNCLSVEAQANIKGVTVSAATQFCKTKSSKLKTGATFRQAFSDRSIEVLGGDGDVGDVLFNSNGVAGFKKWLASIKRVPGLVWYQISPLHLLVPDNPVLQETLSKAISHY
>sequence25
KAIGNDIYMPAEFAACKFSLRSGRGPVYSSHINPGQLIFGQASDAQHHTSTTHQLPLPPKAMGESNMGSLYVNIVKYLRDCQGAGNPLVVFTTAELMPVVSGCFRYLQSDSDEVGEQIHVYDILYLFYVLKKEVMDIADLPHANINKCITDNFFFNDFFEYYSNIACQFHEDNDRGKYCTHSMVSRWCYTFCDYMCGDLAIKPLAGKHMPPVQEQ
>sequence26
ASFSASADFKQMKDTLSQKDTQCIQSHATCTAFDLSFYNDINSLPLLSLQLVDKIQQLYSYSNYTNEKEYYYDFFDSWGTHVATSVRLGSLFGYQFKMSSSSVQQQSSLGFDASVGASLYGVKGKVSTSYAQQQLNSFQQSLKSWSSYSLGATPNANLDAAQWATQTLDTPMPIKTELTPIYTFISQYQNNADIPLNSTTMAYVVNAMQNY
>sequence27
FSASATNEFSDSSLRKSENEFSRCQQSFDLWSISIPADIARLQNYVSDDFIKLINAINPESKDSIATVFNVYGSHVLMSGVMGGKAHVSASANKLTLTQKFEMSTIVQAKYEQLTSQLSVEDKLKYSEAFDSFSESGSYTYDILGGSPSLGALVFKNNSQGSSDDNLKNWIQSISSMPVLTKFIDQTSLMPVWLLCEDKTKADALKKY
>sequence29
GSFSASTGYKKFINEVSKRTSKTYFIKSNCIKYTIGLPPYVPWEQTTAYMNAVGILPKEFTGLNEDSCAPDVYEQKKMTKQCKNVHQWIQFFKTYGTHIIVEAQLGGKITKIINVSNTAVNQMKKDGVSVKAQIQAQFGFASVGGSTSVSSDNSSKNDNSSYDMSEKLVVIGGNPIKDVTKEENLYEWSKTVSSNPMPIHIKLLPIYKSFDSEELKESYEQAVLYY
>sequence30
KYNINRLLCYPAEIAITTFNMKEGIIYSDSKFVEFDERWAFGQDERDHRTMSERVNENEDLDELMHQLSSTIGIDHLSTDHNPESPFGVFEWLRSRIDIYPYAKILVDMNQFRFVYNGLKNIAKYHGFTGQTYFNENIKFNMVSIQDFTDVLLDYCSLLVARRWSDQDINNQYLRPNLVPNRDKNTICEYHETVPCPTRYNCMKAHNSRLVHHFFTIMKAHRLQNFRYSPPVHEPCIEDM
>sequence31
NGKFSTENQRMKIHQVKDSSVTTRVQIRNFIYKVKVFPDFSLDVRFAQQAKEIADAIENNQSRYADYLSERMVMDFGTHVITSVDAGASLVEEDYLNSKYVSDNVSQSSSISAQAGLNFFDKLKFDISSHNSQQSSTLQGYQSNIRYSLIQSHGGGIPFYPGMTLQKWQESTRNNLVAIDRSGLPLQYFISPNMLPDLPQPTVRKVSHLVRSAIERY
>sequence32
ISLGINHELDQFHQEITQNNKAVSVSQSYWAQYSLTTAPAFLMPLNPMFKQSLDALNRMAKEPTTDTQQTIYNQVINSFGTHYVTSAIMGGAAKIYTTLDQNYLKTVDIEQTKTQIGINFSYNVFQFKFGFNSTDLAQKLDENFKKNSNDIIIFSPEVDHISDPKAWSTWESTVPEKPQPVNTTVSYISDLAYEFPEVQAHLRKTIEFY
>sequence33
KAVNTDIYIPAEFSACEFSLKTGVNSLYSTMIDPSQLIFGQTCDAMLYAAATHQLPLPPAALGESKMTKLYHSIQDYLRSRLERTDKNLKSLVVFTKTDDIDMVKSCFRFIKSGYHDEQSKRYDDDNDEENDQFKFFEAAASKFLPIVVYDIQYLFLALKLAAMDIGGLTLPKPNLYITDAFFSRDFYEFQDGIACWFHEDMDRSKYCTQSKVKRWAYTFCDYMCADLAIKMQPGKHMPPSYKA
>sequence34
KALTGDIYVPAEFSACRYSLKGGISSNYSTMINPGHIIYGQSRDAQDHSKTTHKLPLPPQAFGETNMGKLYIDIFNWLSVRNEEKLDQDPVIVYTTPELMPVVKSCFRYLASEAEIDEDERKIMVFDIHHLFYTLKKSVLDVAGVTNDRINFHVTNNFFVKDFFEYTEGISCDYHEKIDRSKYCTNSMVKRWGFTFSDYMCADLAIPLQPGKHIPLKVKP
>sequence36
NSFTGSLEYKNALMNFKSKRQKIYNKTEQCVRYQVGIPLNLKWGYTEYFNRTLSRLPILSSKVIKNCNIDNKLNLSDEECKSIKPWIKFFEVFGTHFNNQLTLGGKINQTMVFDSSTLEELKKKGIDIEAEVRTELGSGNVKLNLDMGGKKSRLDEIGQKKMSVLGGKMPNFPMDDNEFAHWAETVAENPMPIGVVSTSLKTLMHPAMHQSYDQALHQY
>sequence37
VNGKFSTEFQRMKTLQVKDQAVTTRVQVRNRIYTVKTTPTSELSLGFTKALMDICDQLEKNQTKMATYLAELLILNYGTHVITSVDAGAALVQEDHVRSSFLLDNQNSQNTVTASAGIAFLNIVNFKVETDYISQTSLTKDYLSNRTNSRVQSFGGVPFYPGITLETWQKGITNHLVAIDRAGLPLHFFIKPDKLPGLPGPLVKKLSKTVETAVRHY
>sequence39
SSHNSAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFREY
>sequence41
YSGYNNDEYTHDDMLHNLNKHNKLLIKSYKCIVYKANLTSLNFLKNKNNDEIGLNFNGMLILNVLKKLNKNCNSEFDNQKCPISMFRNDPFDANCIRCIMPWMEFFKDYGTFMTKEITMGGVINKFYNIKKYEGSMRKEYKKKTIKQSSTFFHLSKSRSESLNEKKSGETNKEELEELYTLTIGPEPPGNVSNSKVISDWLEKVVHNPTPIDLELVPIKQIIPEKYLKIYENALKYY
>sequence43
SGSRESAFLNKLSKYNEKKYSFIRIFTKVQTASFKMRRDNIMLDEVMLQSLMELPEQYNYGMYAKFIDDYGTHYITSGSMGGVYEYILVLNKENMTKSGVTSDDVTSCFGGSFGIDYDYTDNLQITGSLSGKHCKKLGGGHREDEESNMAVEDIISRVRGGSSGWGGGLTQNGSIITYRAWGRSLKYNPAVIDFEMKPIYEILRHTNLGPLEAKCQNLRRALDQY
>sequence44
KALTTDVYVPAEFSASEYSFNEGIMSVYSTLIDPGQIIFGQGSDAQHHSSTTHNLPLPPNALGEKNMGKLYRNILEYLSKIQEGKDATKPFVVFTKTDMVPVVKSCFRYLACENQDGSYENGDQIQVLDIQYLLFILKKEVLDIAGVSDEKINLYVTDAYFLKDFFEFTPEISCQYHEENDRSKYCTQSLVMRWAYTFSDYMCSDLAISVQPGKHIPPKTKP
>sequence45
SVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHY
>sequence47
KALTTDVYVPAEFAACEYSLKEGIRSIYSTMIDPGQIIFGQGSDALLHSSTTHDLPLPPNALGEKNMTKLYRNIVDYLSKCQGKGKTLVVFTPAENITMVKSCFRYLECDDDFRDGGEKIQVFDIQYLLFILKKEVMNVADLNDEKINKFATDAFFKKDFFEFTAGIACQYHEDNDRTKYCTQSMVTRWAYTFTDFMCGDLAITVQPGKHIPAQTK
>sequence48
AKFSLSTNYSEISDLLKNNDNKLYVDKSYCFLLEAALPIHNSLKMTRSFATAMSKLTRDFKKHTKDCNAIKYSINKNNKDCKEIKNWMELFDQFGTHFSYNIKLGGRITFITQEEGSKDERGNEKSVDVGVGGKFEKDNKGVGIEGNVKFVFGNKRGESKNLSFKYTNILGGLPVSDISKESEYVKWIKSVYKYPMPIRTQFAPISKIFKSKALKDSYDEAFRFY
>sequence49
GSFSASVGYASASNTISKKKFRMFILKSYCFKYVASLSQYSQWKLSDQFLRAINLLPSYFNSLEHDGKYCNAEELRDNKTGMDSCGKSVESWLYFFKNFGTHVSTVIHLGGKITQQVKISKNEYKSLSESGLSTSVSASVGFGLFKANASSSTDSKESSNEESSNSSIEKETVIIGGTTIYDPNDPSNFEKWADSIKNNPMPIKGQYEPLSRILPERLTKIYDEALSFY
>sequence50
NIDGECMLAEMAMNEFSLFSGIVEKFHAIVGPWMPESESHRRRASRHALETHRIPLQNNFATITKKRLVEEILGRVEPSIACHQGVKVGLYSDACNEKTKIDLNIKNNFKDPGMLCDKNDRRFILVLQSELDLMVDSMKHLANNVGFHYDGFPVTPNCFVIVEAFVEAISDIMNEKIDVETMRWFSLLGQKVDAEDSVSPWETGTDFHCARHSEPKSNFCASVTVGRTCCIVYHVIGSFFRRYHLKKIPTAHQPSSSNS
>sequence51
KALNGDVYQPAELSACRFSLKGGISSNYSTMINPGHIIFGQTSDAQDHSRTTHKLPLPPNAMGEKNLGNLYSDTLKWLSASNDEEDEQYDHPVIVYTTPELMPVVKSCFRYLACEGDTDKHAKKIIVYDICYLFLTLKKTVLDLVGVPSDHMNIHVTNSFFRRDFFEFSSGIACDYHEEVDRTKYCTKSMVLRWGYMISHYICGDLAIPLQPRKHVPIEVKH
>sequence52
RTNTGVHLPAELAVVRYSLEGGVKDKLHMFINPGRLPIGMAYDAQRHAEEDHQLPLPPNAMGVSDYGDVAMRLFSFLLQNDDMPLLFTDETDVPRVESMLEHILSDHLSEIELRICPLAELFFRLKQNVELYMMDQTTFPSVYIAQQIITKDVYDYTKGISCDYHEEKDNVLYCPLSRCIRWAYIISDNCCQDMGIEPIPGKHVPLNANT
>sequence53
FSGSLTCEFVKKSTQHAKNTVTCSTAAHSLYTLKEDDSSNPSEKRLDSCFRNWIENKLSANSPDSWSAFIQKFGTHYIASATFGGIGFQVLKLSFEQVEDLHSKKISLETAAANSLLKGSVSSSTESGYSSYSSTSSSHTVFLGGTVLPSVHDERLDFKDWSESVHLEPVPIQVSLQPITNLLVPLHFPNIGAAELSNKRESLQQAIRVY
>sequence54
WAFTASSEFNHMQQKIEQTSATFVISMATCQIAQITQVPELAEFHQSFIDQLSALPVEYSAPQYLEFLSNFGTHYATDIILGSKVGYVYTLPPAIVDDFDQKKFKEIDLKQAATITSALLKGVIGQQILPKEQEAKAYSDVSKLSTQSFTIEIGPQSTENTPKDWLRETELEPTPIRYTLKSISELVSEGKGQLSSVKEYQKIGQNLKKALTDY
>sequence56
VTSGGTYIPAEMGLVRYSLKDGVMDKLHMFIDPGKLPLGMAYDAKQHSESDHQLPIPPDAKGEKDNDEIILKLFSFLSQQEKMPPLFTETNDIRMVENILKGILNQGSMDENTLLVCPLSELFYQLKRATESFGLDIKTFPSVHIAQAIIQKDVYEYTKDISCEFHEDQGNGKYCPLSRCVRWAYIISDSCCLDLSIEMKPGRHLPMNADT
>sequence57
KSMTNDIYIPAEFSACQFSLKSGICSMYSSHIDPGQLIFGQGSETMHHTKHTHQLPLPPNAMGESDIGRLYANIVEYLRACNPDAKPNDPLVVFATPEFMPIVKGCFRYLESDSEEPLATIHIYDIQYLLYVLKLEVLDSVDIRNVTVNRTATDSLFINDYFCYHLGISCQYHEDIDRCQYCTQSIISRWCYVFSDFMCGDLAITPLPGKHMPPKQEP
>sequence58
SSSRSYTSHTNEIHKGKSYQLLVVENTVEVAQFINNNPEFLQLAEPFWKELSHLPSLYDYSAYRRLIDQYGTHYLQSGSLGGEYRVLFYVDSEKLKQNDFNSVEEKKCKSSGWHFVVKFSSHGCKELENALKAASGTQNNVLRGEPFIRGGGAGFISGLSYLELDNPAGNKRRYSAWAESVTNLPQVIKQKLTPLYELVKEVPCASVKKLYLKWALEEY
>sequence60
KDACTPAELAVVQFTLKHGMRNIYHTLINPDGSQYATQEHVRATHQYPNALGNDDLEGILADLLEFVRLECGPEAELSPMFTLESQISVVNNALEFLNGGVASQLKVHPIEYLFYVLKKATCAAGILPPPASFHITNAQFNLDPHEFLSDIGCEFHKQRDLTAHCAKSYVTRWAFAFADYMCSDLAIKMLPNRHMPNRLDT
>sequence63
IDLANEPLYREAVKASQQKDSVFYRVHQVIATSTFKVKSSDLYLSDPFLQFLNSLPLEYNYALYRHIFQLFGTHYFSSGTLGGKYDLLFQFDREELKTFGLKESDSEYCLSDDDTLVTFFYNRHKQRNTCGNISMKTKYEGSMVKASERCITSVQGGRTEFAAALAWEKKGVSPQSTVYTDWIKSTIENPVVINYELLPLVNLVRGISCAVTKRRHFHRALEEY
>sequence65
HPFNDSNYYKMLVKRINRGDSIIIEKKLCSKYFSFINDINKNDLDTFFLTTLNELGDNYQNIKDDTYKCSLQYYKMNNMNKYSENCLKTITPWISFFNMYGTHVISGVYYGGKIIHNLYFENNNLKKKEYKIRMYKSRLNPFSTINSNLYFGSSLSKEKIIYIRERNLIMDGGVHINPYNINEVNMENKKKNIYVNNVEKNLYDQKKKYRNYYNFYELKDDVRKRNYYNSWKDTIEWEQAKPVKLNLVPLSEFINSEEGKSAYYMALEFY
>sequence67
CEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHKIPISNFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWIRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCKKIAYCISNSLATLFGIQLTEAHVPLQ
>sequence68
GKFSEENTRMKIHQVRGNSVTTRVQVRNHLYTVNAYPDFTLDSRFSQQISELADAIENNQTRQAMYLSEKVILEYGTHVITSIDAGATLVQEDYIKRSYVSDTNSERSSVSASAGINFFNMVNFNFGSKETEQTSETLTYQQNITYSLVQSHGGALFYQGITMQKWQESTQNHLVAIDRSGLPIHYFLNPAVFPDLPVPTLHKLAFSVQKAAERY
>sequence70
GMFNNMFAFSKCWPKDASSVKTLAYDGWFISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGKDVIHVKQMRKSNHEPEEIQKMLKHWGDERFCVDPVESKSPASVYSGKPKEENLLQWGLQPFGTSVSSAVVMHTKNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVISMCFVPITSLLSGLPGTGFLSHAVNLY
>sequence71
GNFNATFGFQSGSWATDAANVKSLGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVGGQDVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHSHSQPKFPEAFNVFDDKQTVAFNNFSINSQNGITVICAKRGGDGRAKSHSEWLITVPDKPDAINFNFIPITSLLKDVPGSGLLSHAMSLY
>sequence72
KPFSASMPYKSYFADLEIKKKKYALAQNMCVLNYATYDLKESGNNINKDFVLDIEKLPILTKNQMKLCTKVLYMNNNLHCSEGIKSWMKFFEKYGTHVVLSAHFGGMSFNTMEITKRKIEEIKIYKYKYSLWNNPYLNIFKSGSLFQDLSINVDGHKENKKNNSNNNINIDEKKKNDAYIKNDVLIEQYRDNINLEIRGGNNFDEKWRNLTYLVWKNSIYSNIVPIHLDLYSLNTFMPIEKKESYDMALLFY
>sequence73
EFSAEFMFLNNISKYTNKEMGFVQLMSKIQTSQFKMRSKDLVLDEDMLWALSDLPDHYHFGAYSQFFNEYGTHYVTEGTMGGLMDYVAVVNINEMEENQMTGQMIGSCIGGSFGLVFMEKIKATVKGKSCGKFTSNEKTSDESHSAIKDVFGFVKGGNTASSAGSLGIKDAKSYKDWGKSLKYNPALIEFEILPIYELLRLSTAAEQLSSKLPHVKMAWEEY
>sequence74
ELPDDMGYMPCEIGVVEYSLQEGITREFHRFIQPGKPPLGYRYLCQSTSDNTHQIPIEGFELAEGDYHRLWTDLCKFTSPNGRDFPPLYVQVTHTSMCEWCLDWLSEMAGEYNRFHVYELDSLVKDLYEHGEGHAPSLSMIASILNTSVFDYEDGSSCEYHASKEVKYCALGAVKRFCFSISDSMAQVYDLQLTARHLPERPEN
>sequence75
FKFSASAKFKKLQDVSKSGKSKMFINKSYCFKYVAGISTSLKWDFTLGFQSSLGRLSDFKGLEKDSICKPFIYREDPKNENCQELGISDWMELFNTFGTHVATKIYLGGKIFTTLEIKKSQEKKLSDQGLDVRAILSAKIKDTDIDSNVEVSTIKSKNAGDFLLDTKKSTFVLGGDIYGHGKTIEFAEWARSVADHAMPIKAEFTPISHFIDKNLRDAYNKAYLYY
>sequence76
HPFNSSNYYRMLVERIEKGYSIIIDKKICSRYFVALKNVDSSKLDPFFINMLNDLEKNYKNININKYKCSVHSYKKNKYDQNCLRTITPWITFFNLYGTHLVSEVYYGGKIINILYSEYYNNIYNSEQVQIYKKRLNPFTSGSKLGSFYFGSIISKKQNSTNQKDNDNMLTYIKEKNTIYDGGEDIKEYKDGEGKVLMINGMEDEWEKTINGKYAKPIKLILKPFSDFIKTNDGKVAYYKALEYY
>sequence77
GRFRASVDYQNMQNDMASGTYQYIVSNSRCSVFQLDLIDSPTYHPQFSNDILLNLQQLALNQNNANNTEANAYYDFFDNWGTHVVTSVDLGSLFGYKFKMLKTDVQSMQNQGIDVSASATLFNVRGRTNTQLEQNSLNSFSQSIQSWTSYSIGATPDLNNDPANWATQTLTKPMPIKSSITPYHEALKIFTQGGNNILSSTQILQLYSKLRMY
>sequence79
FLGEIENRFDMSDDKSSKRTNEYISYDINNTLYRITLKGNVPLSEQFQEDLNSLDATTLFEKYGTHYLKSTWIGGRISFSTTIDTYGMTDDMRKKFAFVTKRKVGNWTGTSDVELTREEKDISEKMKSNSIVRVWGGDPKLGRDIERAIQGHTVSDIYQQWGQTVEERPYISDFDHGQGLVPIYELATGTRKEQLKEQWEAY
>sequence82
GKFSASSDYQEVQDGLNSANIQYIESQARCSIFQLDVYNSPSQNAQLTPQLQQALFTLAFNQTSQNDYYDFIDTWGTHVVTSVNLGSRFGYKYQMDKYQSNQLTQQGVNLSVSASYFSSSGSASGAYNQTQIQNFTQAMTSWSSYSIGATPDANQDPLSWAQQTLDTPMPINISILSFDDFLNKFSFSVNGLTSSQLNTVISNLSQY
>sequence83
SQSRMTHEVIESAQKIDSKYFKVVNTVELAQFKMRRNGLNPSDIFLRRMKDLPVYYNYLDYSFLIEDFGTHYFSSGSLGGQYEYVYRYSRADLSHSGLTEEEQKSCLSAEAKASFFSFSGSSSGSRCKENALSQRNSGSFTLSASESFSHVKGGSSESAGQLAFANGPNPQKYEAWIQDVKRNPAIISYEITPISELLVGIPYADIKRRNMEKALVEY
>sequence85
YYPTEDKYFICEIAIAAVSLKNGVEDVFHRIVKPGKLPLGYYGGALTHSKETHQMLELVQDEPYENNTREVFNEMTSFLKLWRGKGSDSIVYADEKTHEMITKVIDNFCQEFNYPDEIKVYNFQYLFFALRNSVAARTVWPTETYSSTELEKDLYSYTPDISCEFHEMSDISVYCSKSIVTRYCYTLCDHCCTDLNIQLVAGFHVPKNSRI
>sequence86
ISAEVKSKFSKESLDVKVGKEVYLTSSVSVPRLEFCINPLKVKLSDEFYSKLNNVETHGELIKVFKEYGEFYPKRYILGGMITNHETQKFTTIENLESKLLSLSAGVNAAIGPVKVGGSVGGESATDEKKSKQNEENSSKKDVIGGDPSKTGSEWVSSLSDINNWGIIGIDVYPIMDLIKKNDNTLYKKLEKIKNS
>sequence87
KTSTEAFVPAEIALIKYNLELGVLDKLHELINPVRLPLGLAHEALTYSEQTHELPTPPNAMGETDFYTVLQKILSFTDYNSKPHKKLAIMTDAKEVPVIESLLSQLNDDVKLEYQFLVIPLGEFFFHLKRATEKYGLDICTFPTKTVADILLKKDAYEYTSGIACDFHEKLGNQRFCALSKVVRWSYIISDNCCLDLSIDLIAGRHLPSNADT
>sequence89
GFFNAMFEFTGCWQKDASITKSLAFDGWCITLYTVALSKAHIILKDHVKQAVPSTWEPAALARFIKKFGTHIVVGVKMGGKDVIYLKQQHSSSLQAVDVQKRLKEMSDQRFLDANGHSDISLADSYAKDNKVEAREQRLRFVESNPLNSYSSNEELVMMPKRRGGRDKDIISHSEWLNTVQAEPDVISMSFIPITSLLNGVPGCGFLNHAINLY
>sequence90
SFSASTGYRDFAKEVSKKDTRTYMLKNYCMRYEAGVAQSNHLKWNVTLAFAAGVSQLPDVFDAHNPECACSAEQWRQDQNAEACTKTNVPIWISFIEQFGTHFLVRLFAGGKMTYQVTAKRSEVEKMRNMGIDVKTQLKMQLGGVSGGAGQGTSSKKNQSSSEYQMNVQKETLVIGGRPPGNVSDPAALAAWADTVEELPMPVKFEVQPLYHLLPVEKQEAFKQAVTFY
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