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ljwolf
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Feb 7, 2025
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| title: 'AGATE.jl: A probabilistic programming framework for tuneable aquatic ecosystems' | |||
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We're not really delivering on "probabilistic programming" here at the moment, but "composable" and "interoperable" might be more useful?
radka-j
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Feb 7, 2025
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| # Models | ||
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| We developed `AGATE.jl` (Aquatic GCM-Agnostic Tunable Ecosystems) to as a framework of probabilistic programming primitives to support the development and extension of aquatic ecosystem models. In this framework, model parameters representing traits, such as size and photosynthesis, are mechanistically defined and co-vary based on trait trade-offs based on well-established ecological theories . Such trade-offs represent the costs and benefits of investment in different traits. For example, predator defence is a trait that comes at the cost of additional resource requirements. In this vein, `AGATE.jl` implements many of the basic processes required to model aquatic ecosystems as follows. |
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Related to the title comment, I'd also remove "probabilistic programming primitives" here.
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I've seeded this with proposal text, some new stuff, and outlined the remainder of the submission in a way I think makes sense.