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  1. enzyme_engine enzyme_engine Public

    Enzyme Engine is a bioinformatics tool designed to find and map genomic neighborhood networks of prokaryotic protein homologs. It combines BLAST discovery with local synteny analysis and domain ide…

    Python

  2. Rice-PCA-SNPs Rice-PCA-SNPs Public

    An analysis of SNP data from many rice genome samples. Includes PCA, MDS plots, processing with fastStructure, visualizing results

    HTML

  3. Rice-GWAS Rice-GWAS Public

    GWAS on rice RNA seq data, features use of statgenGWAS, and experimentation with different methods of pop. structure control

    HTML 1