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19 changes: 19 additions & 0 deletions course/00_Homeworks/ATL_HW_week8
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problem 1
# Using flowGate, go ahead and create your own series of gates for either our data or your own for any
#cell populations that might interest you. Once done, save the GatingSet, and then successfully reload it.
# Add another gate, but intentionally misdraw it. Then proceed to visualize, identify and correct it, before saving again.
#If you do plan to switch over to R for gating long-term, these skillsets will be essential, as you will need to be confident
# in your ability to adjust your gates as needed.

#problem 2
#Go ahead and create your own openCyto gate template, extending to whatever cell target population of interest.
#Visualize the differences, and ensure that the gates are correctly applied for everyone. Set gate_constaint arguments
#as needed until everything is just right.
#If you do plan to switch over to R for gating long-term, these skillsets will be essential,
#as you will need to be confident in your ability to adjust your gates as needed.

#problem 3
#Re-run your openCyto template, but then add a few additional flowGate on to to extend it further.
#Save the gating set, close out of positron, and successfully reload.
problem1
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