This project objective is to create a method to calculate Mutual information as fastly as possible. To do that we did the following:

1. Discretize first
2. Calculate entropies
3. Obtain MI with entropies

Please follow these steps:

1. Create conda environment with environment.yaml
2. Make pipeline.sh executable
3. Add matrix counts to data
4. Modify pipeline.sh to be able to read the matrix

Considerations> Right now the input accepts genes as rows.

You can execute an example with the pipeline as it is.