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Sentieon
sentieon-cli
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dnascope-pangenome: NUMA alignment lanes, faster indel2cnv, vg haplotypes alongside bwa
- #41
#41
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DonFreed
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Sentieon/sentieon-cli:dev
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haodongchen:claude/pangenome-large-hosts-dev
haodongchen/sentieon-cli:claude/pangenome-large-hosts-dev
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Oct 28, 2026
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dnascope-pangenome: NUMA alignment lanes, faster indel2cnv, vg haplotypes alongside bwa
#41
DonFreed
merged 4 commits into
Sentieon:dev
Sentieon/sentieon-cli:dev
from
haodongchen:claude/pangenome-large-hosts-dev
haodongchen/sentieon-cli:claude/pangenome-large-hosts-dev
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Commits on Oct 27, 2026
Split pangenome alignment into one lane per NUMA node
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Hand indel2cnv's variants to workers one at a time
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Run vg haplotypes alongside bwa when both fit in memory
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Commits on Oct 28, 2026
Name each alignment lane's job, and use one -K for every pangenome run
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