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Fix deprecation warnings #122

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Merged
ChrisRackauckas merged 1 commit into from
Feb 9, 2026
Merged

Fix deprecation warnings #122

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4 changes: 3 additions & 1 deletion Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -26,6 +26,7 @@ SparseDiffTools = "47a9eef4-7e08-11e9-0b38-333d64bd3804"
MultiScaleArraysSparseDiffToolsExt = "SparseDiffTools"

[compat]
ADTypes = "1"
DiffEqBase = "6.5"
DifferentiationInterface = "0.7.7"
FiniteDiff = "2.3"
Expand All @@ -43,10 +44,11 @@ StochasticDiffEq = "6.13"
julia = "1.10"

[extras]
ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[targets]
test = ["JET", "OrdinaryDiffEq", "SafeTestsets", "Test"]
test = ["ADTypes", "JET", "OrdinaryDiffEq", "SafeTestsets", "Test"]
17 changes: 12 additions & 5 deletions test/dynamic_diffeq.jl
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Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
using MultiScaleArrays
using OrdinaryDiffEq, DiffEqBase, Test, StochasticDiffEq, Statistics
using ADTypes

struct Cell{B} <: AbstractMultiScaleArrayLeaf{B}
values::Vector{B}
Expand Down Expand Up @@ -64,9 +65,12 @@ prob = ODEProblem(f, embryo, (0.0, 1.0))
test_embryo = deepcopy(embryo)

sol = solve(prob, Tsit5(), callback = growing_cb, tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = false), tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = false), callback = growing_cb, tstops = tstop)
sol = solve(prob, Rosenbrock23(chunk_size = 1), callback = growing_cb, tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = AutoFiniteDiff()), tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = AutoFiniteDiff()), callback = growing_cb, tstops = tstop)
sol = solve(
prob, Rosenbrock23(autodiff = AutoForwardDiff(chunksize = 1)), callback = growing_cb,
tstops = tstop
)

affect_del! = function (integrator)
return remove_node!(integrator, 1, 1, 1)
Expand All @@ -76,9 +80,12 @@ shrinking_cb = DiscreteCallback(condition, affect_del!)

sol = solve(prob, Tsit5(), callback = shrinking_cb, tstops = tstop)

sol = solve(prob, Rosenbrock23(autodiff = false), callback = shrinking_cb, tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = AutoFiniteDiff()), callback = shrinking_cb, tstops = tstop)

sol = solve(prob, Rosenbrock23(chunk_size = 1), callback = shrinking_cb, tstops = tstop)
sol = solve(
prob, Rosenbrock23(autodiff = AutoForwardDiff(chunksize = 1)), callback = shrinking_cb,
tstops = tstop
)

@test length(sol[end]) == 17

Expand Down
5 changes: 3 additions & 2 deletions test/single_layer_diffeq.jl
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Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
using MultiScaleArrays
using OrdinaryDiffEq, DiffEqBase, Test, StochasticDiffEq, Statistics
using ADTypes

struct Cell2{B} <: AbstractMultiScaleArrayLeaf{B}
values::Vector{B}
Expand Down Expand Up @@ -50,7 +51,7 @@ add_node!(pop, pop.nodes[1])

sol = solve(prob, Tsit5(), callback = growing_cb, tstops = tstop)

sol = solve(prob, Rosenbrock23(chunk_size = 1), callback = growing_cb, tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = AutoForwardDiff(chunksize = 1)), callback = growing_cb, tstops = tstop)

@test length(sol[end]) == 13

Expand All @@ -64,7 +65,7 @@ prob = ODEProblem(f4, deepcopy(pop), (0.0, 1.0))
sol = solve(prob, Tsit5(), callback = shrinking_cb, tstops = tstop)

prob = ODEProblem(f4, deepcopy(pop), (0.0, 1.0))
sol = solve(prob, Rosenbrock23(chunk_size = 1), callback = shrinking_cb, tstops = tstop)
sol = solve(prob, Rosenbrock23(autodiff = AutoForwardDiff(chunksize = 1)), callback = shrinking_cb, tstops = tstop)
@test length(sol[end]) == 10

println("Do the SDE Part")
Expand Down
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