Issues · SATAY-LL/LaanLab-SATAY-DataAnalysis · GitHub

This repository was archived by the owner on Nov 8, 2021. It is now read-only.

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Troubleshooting of the pipeline

#45

· leilaicruz opened

on Apr 20, 2021

Clean up master branch

#44

· Gregory94 opened

on Mar 23, 2021

Documentation

#43

· Gregory94 opened

on Mar 22, 2021

Gene name aliases

#37

· Gregory94 opened

on Mar 11, 2021

Fitness models out of SATAY data

#36

· leilaicruz opened

on Mar 9, 2021

Volcano plot for showing significant changes in reads per gene

data exploration

#35

· Gregory94 opened

on Feb 23, 2021

SATAY Data sequencing of WT and dnrp1 strains thanks to Agnes Michel (from Benoit lab, Oxford)

data exploration

data processing

#34

· leilaicruz opened

on Feb 17, 2021

Issues regarding processing_workflow.sh

#33

· Gregory94 opened

on Feb 1, 2021

Implement Unit testing as part of the pipeline workflow

software_feature

#32

· leilaicruz opened

on Dec 7, 2020

Trying/exploring the features from Transit: a Python software to analyse transposon sequencing dataset in bacteria

data exploration

software_feature

#31

· leilaicruz opened

on Dec 7, 2020

Interpretation of sequencing data obtained from NovoGene

sequencing data processing

#30

· EKingma opened

on Nov 23, 2020

Preprocessing workflow issues and comments

data processing

#29

· Gregory94 opened

on Oct 22, 2020