This repository is part of the Introduction to Systems Biology (SB) course material.
I hope you find the slides useful:
Class 01 - Introduction to SB. Overlaps a lot with an introduction to Bioinformatics.
Class 02 - The basics of networks plus the WGCNA method, step by step.
Class 03 - Overview of network Medicine.
As highlighted in the slides, I created the content based on a series of papers and books 📚!
Hands-on tutorials:
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WGCNA for bulk RNASeq data: MyND monocytes. Navarro et al. Nat aging, 2021.
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WGCNA for bulk RNASeq data: Thoracic spinal cord. Humphrey et al. Nat Neuroscience, 2022.
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WGCNA paper: Peter Langfelder & Steve Horvath, 2008.
by Katia Lopes.