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48 changes: 48 additions & 0 deletions database/github/BehRoooz/proseqgo/metadata.json
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51 changes: 51 additions & 0 deletions database/github/BirolLab/tigmint/metadata.json
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38 changes: 38 additions & 0 deletions database/github/CWorthy-ocean/roms-tools/metadata.json
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39 changes: 39 additions & 0 deletions database/github/Cristianetaniguti/Qploidy/metadata.json
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33 changes: 33 additions & 0 deletions database/github/Cristianetaniguti/onemap/metadata.json
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55 changes: 55 additions & 0 deletions database/github/DeepLabCut/DeepLabCut/metadata.json
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44 changes: 44 additions & 0 deletions database/github/Digdgeo/Ndvi2Gif/metadata.json
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