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Merge pull request #17 from PurcellLab/docs/example-reports
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docs: Example reports accordion (human, class I, mouse)
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docs: add Example reports accordion (human all, human class I, mouse)
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Merge pull request #16 from PurcellLab/docs/llm-txt-copy
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docs: raw /llm.txt + copy-page-as-text button
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docs: serve raw /llm.txt and add a copy-page-as-text button on all pages
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Merge pull request #15 from PurcellLab/docs/llm-guide
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docs: add /llm complete operating guide
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docs: add /llm complete operating guide for LLM-assisted end users
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Merge pull request #14 from PurcellLab/docs/readme-refresh
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Merge pull request #13 from PurcellLab/feature/report-ux-topn
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test: keep test_e2e comment within black line length
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Merge pull request #12 from PurcellLab/feature/report-ux-topn
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Report redesign + --always-top-n/--class search options + MkDocs docs site
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docs: add ruff to docs deps so mkdocstrings formats signatures
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docs: MkDocs Material site with API reference and example report
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feat: report redesign + --always-top-n and --class search options
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packaging: enrich PyPI metadata (project URLs, classifiers, keywords)
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rename: hla-pepclust -> mhc-tp (package, command, env vars, brand)
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Merge pull request #11 from PurcellLab/rewrite/modern-pip-pixi
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