All workflows

Workflow runs

• R CMD check and package fixes

  completed successfully:
  R CMD check#46:Commitfa9b940pushedbychutter
  master

  Oct 3, 20264m 21s
  More actions for workflow run 46

• Fixed paralog removal error removing too many matches

  failed:
  R CMD check#45:Commit740b1cfpushedbychutter
  master

  Oct 1, 202611m 11s
  More actions for workflow run 45

• new alignment failure behavior

  failed:
  R CMD check#44:Commitb9ae169pushedbychutter
  master

  Sep 24, 20263m 46s
  More actions for workflow run 44

• macse bug with empty sequences

  failed:
  R CMD check#43:Commit1184ee5pushedbychutter
  master

  Sep 24, 20264m 1s
  More actions for workflow run 43

• more macse fixes

  failed:
  R CMD check#42:Commit253f00cpushedbychutter
  master

  Sep 24, 20264m 17s
  More actions for workflow run 42

• Fix Macse crash

  failed:
  R CMD check#41:Commitfd37f8fpushedbychutter
  master

  Sep 24, 20263m 47s
  More actions for workflow run 41

• rearrange file locations

  failed:
  R CMD check#40:Commita553701pushedbychutter
  master

  Sep 22, 20263m 24s
  More actions for workflow run 40

• workflow 1 failed if workflow 0 ran first

  failed:
  R CMD check#39:Commit9204903pushedbychutter
  master

  Sep 21, 20263m 44s
  More actions for workflow run 39

• Update variants.VCFtoContigs.R

  failed:
  R CMD check#38:Commit0feb230pushedbychutter
  master

  Sep 21, 20263m 42s
  More actions for workflow run 38

• depth bug

  failed:
  R CMD check#37:Commit4b3ba4epushedbychutter
  master

  Sep 20, 20263m 41s
  More actions for workflow run 37

• bug fix on reference names not matching

  failed:
  R CMD check#36:Commit66233a4pushedbychutter
  master

  Sep 20, 20263m 26s
  More actions for workflow run 36

• write both contig output folders when both = T

  failed:
  R CMD check#35:Commitbba832fpushedbychutter
  master

  Sep 20, 20263m 32s
  More actions for workflow run 35

• Bug fixes, combine remove contamination functions together

  failed:
  R CMD check#34:Commita33e871pushedbychutter
  master

  Sep 20, 20263m 33s
  More actions for workflow run 34

• retry bug fix

  failed:
  R CMD check#33:Commite35aa8epushedbychutter
  master

  Sep 18, 20263m 33s
  More actions for workflow run 33

• update workflow 0X bugs

  failed:
  R CMD check#32:Commit504a9f0pushedbychutter
  master

  Sep 18, 20263m 10s
  More actions for workflow run 32

• new workflow, read assessment

  failed:
  R CMD check#31:Commit9983b5apushedbychutter
  master

  Sep 18, 20263m 7s
  More actions for workflow run 31

• Update a handful of parameter defaults

  completed successfully:
  R CMD check#30:Commit09ed5d1pushedbychutter
  master

  Sep 17, 20262m 56s
  More actions for workflow run 30

• Fix R CMD errors

  completed successfully:
  R CMD check#29:Commite23c0bapushedbychutter
  master

  Sep 13, 202611m 30s
  More actions for workflow run 29

• workflow X5 reduce clutter

  failed:
  R CMD check#28:Commita093cbcpushedbychutter
  master

  Sep 13, 202610m 43s
  More actions for workflow run 28

• Workflow X3 bug hunting

  failed:
  R CMD check#27:Commita33d53apushedbychutter
  master

  Sep 13, 202610m 54s
  More actions for workflow run 27

• Cleanup workflow X2 code

  failed:
  R CMD check#26:Commitb6fc848pushedbychutter
  master

  Sep 13, 202611m 21s
  More actions for workflow run 26

• update legacy dealings

  failed:
  R CMD check#25:Commit39d8495pushedbychutter
  master

  Sep 13, 202610m 52s
  More actions for workflow run 25

• fixed bug where sample names got messed up

  failed:
  R CMD check#24:Commit437f70cpushedbychutter
  master

  Sep 12, 202610m 30s
  More actions for workflow run 24

• added an optional paralog analysis

  failed:
  R CMD check#23:Commitc0f9e15pushedbychutter
  master

  Sep 11, 202611m 2s
  More actions for workflow run 23

• remove deprecated functions

  failed:
  R CMD check#22:Commitba5291epushedbychutter
  master

  Sep 9, 20263m 4s
  More actions for workflow run 22