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virusbreakend-build: The download link of taxid10239.nbr is a webpage, not a direct file link

Status: Open.

#705 In PapenfussLab/gridss;

· 54sym opened on Apr 29, 2026

gridss_somatic_filter failed

Status: Open.

#704 In PapenfussLab/gridss;

· lmanchon opened on Apr 23, 2026

bwa-mem2

Status: Open.

#702 In PapenfussLab/gridss;

· lmanchon opened on Nov 8, 2025

Virusbreakend in singularity cannot find Kraken2

Status: Open.

#701 In PapenfussLab/gridss;

· vella12-osu opened on Oct 21, 2025

PositionalAssembler Error: Invalid file pointer

Status: Open.

#694 In PapenfussLab/gridss;

· fmarchiano opened on Apr 1, 2025

PoN created with more samples ended up smaller PoN

Status: Open.

#692 In PapenfussLab/gridss;

· sainadfensi opened on Feb 12, 2025

gridssID

Status: Open.

#690 In PapenfussLab/gridss;

· avrajit opened on Jan 16, 2025

gridss somatic SV error

Status: Open.

#689 In PapenfussLab/gridss;

· dbhayal9 opened on Jan 8, 2025

BasicFastqWriterTest.test_flush_not_spammed fails due to additional flush() calls

Status: Open.

#688 In PapenfussLab/gridss;

· jfcr-genome opened on Jan 1, 2025

Stochastic behaviour of GRIDSS

Status: Open.

#687 In PapenfussLab/gridss;

· gseryogin opened on Dec 13, 2024

virusbreakend-build error on Docker image

Status: Open.

#686 In PapenfussLab/gridss;

· dlopez-bioinfo opened on Dec 11, 2024

ALT coordinate

Status: Open.

#685 In PapenfussLab/gridss;

· uretaj opened on Nov 19, 2024