CI: pushing existing workflows down to 'develop' branch

[cenamiller]

The development process on the NCAR/MPAS-Model-CI branch looked different than on the main MPAS-Dev/MPAS-Model repository, because of the need for the CI files to exist on the default 'master' branch. This means that instead of changes being pushed from develop -> master, in this case I need to push the changes on 'master' -> 'develop'. If the files exist on 'develop', I can test the new changes on the MPAS-Dev/MPAS-Model 'develop' branch when I sync my fork.

[Copilot]

Pull request overview

This PR updates MPAS framework/core code to improve memory/resource cleanup, extend the core package setup interface to pass dminfo, and adds init_atmosphere logic/configuration for selectively activating hydrometeor packages (qc/qr) based on a namelist option or automatic detection from intermediate files.

Changes:

• Extend setup_packages core-interface signatures to accept dminfo and update the driver/callers accordingly.
• Fix multiple memory/resource management issues (Fortran deallocations, pool member removal cleanup, C string ownership/freeing).
• Add init_atmosphere hydrometeor package activation (config_active_hydrometeors) plus Registry updates (packages/vars/options).

Reviewed changes

Copilot reviewed 21 out of 21 changed files in this pull request and generated 4 comments.

Show a summary per file

File	Description
src/tools/registry/gen_inc.c	Adjust generated Fortran dimension assignment to re-point dimension pointers to pool memory (and tweak logging indentation).
src/framework/xml_stream_parser.c	Fix strsep()/free() ownership by preserving the original strdup() pointer.
src/framework/regex_matching.c	Add fast-path for non-regex patterns; improve matching documentation/comments.
src/framework/mpas_stream_manager.F	Ensure per-alarm streamList items are destroyed before destroying the alarms lists.
src/framework/mpas_pool_routines.F	Improve pool cleanup: handle package data in pool destroy; deallocate ptr % data when removing pool members.
src/framework/mpas_io.F	Fix deallocation leaks in close paths; adjust SMIOL init usage; clean up temporary allocations.
src/framework/mpas_framework.F	Remove dminfo allocation in init phase1; reorder finalize to deallocate domain after other finalization steps.
src/framework/mpas_domain_routines.F	Remove redundant allocations (configs/packages/struct pools created via pool routines); add dminfo deallocation; use dmpar exchange-list destroy helpers.
src/framework/mpas_core_types.inc	Extend mpas_setup_packages_function abstract interface to include dminfo.
src/framework/mpas_block_creator.F	Deallocate sendingHaloLayers after use to avoid leaks.
src/external/ezxml/ezxml.c	Mark parse-string memory as malloc-owned using a sentinel in root->len so ezxml_free() frees correctly.
src/driver/mpas_subdriver.F	Update core%setup_packages invocation to pass domain_ptr % dminfo.
src/core_test/mpas_test_core_interface.F	Update test core setup_packages signature to include dminfo.
src/core_sw/mpas_sw_core_interface.F	Update SW core setup_packages signature to include dminfo.
src/core_seaice/model_forward/mpas_seaice_core_interface.F	Update seaice core setup_packages signature to include dminfo.
src/core_ocean/driver/mpas_ocn_core_interface.F	Update ocean core setup_packages signature to include dminfo.
src/core_landice/mode_forward/mpas_li_core_interface.F	Update landice core setup_packages signature to include dminfo.
src/core_init_atmosphere/Registry.xml	Add config_active_hydrometeors; rename aerosol package; add qc/qr packages; gate qc/qr vars by package.
src/core_init_atmosphere/mpas_init_atm_read_met.F	Provide default initial values/null pointer initialization for met_data fields.
src/core_init_atmosphere/mpas_init_atm_core_interface.F	Implement hydrometeor package setup (automatic detection or list); add a new string-splitting helper.
src/core_atmosphere/mpas_atm_core_interface.F	Update atmosphere core setup_packages signature to include dminfo.

Comments suppressed due to low confidence (1)

src/framework/regex_matching.c:72

• Use MAX_LEN instead of the literal 1024 in snprintf so the buffer length stays consistent if MAX_LEN ever changes.

	*imatch = 0;
	len = snprintf(bracketed_pattern, 1024, "^%s$", pattern);
	if ( len >= MAX_LEN ) {
		*imatch = -1;