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Klaus 280 discard pose data when convex hull is larger than expected mouse size#92

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SkepticRaven merged 26 commits into
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KLAUS-280-discard-pose-data-when-convex-hull-is-larger-than-expected-mouse-size
Oct 20, 2025
Merged

Klaus 280 discard pose data when convex hull is larger than expected mouse size#92
SkepticRaven merged 26 commits into
mainfrom
KLAUS-280-discard-pose-data-when-convex-hull-is-larger-than-expected-mouse-size

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@SkepticRaven SkepticRaven commented Oct 2, 2025

Changes:

  • Adds new CLI util for unmarking mice that appear too big.
    • Calculates bounding boxes for keypoints and unmarks assigned identity and confidence values for keypoints when greater than a threshold.
    • Calculates bounding boxes for segmentation and unmarks assigned identity when greater than a threshold.
  • Adds bounding box qc inspection metric
    • Note: IF the above filtering occurs, these will appear as "missing" and not "big poses"
  • De-duplicates some leftover migrated functions from Alex's refactor (Repository reorganization #72)
    • Removes utils.pose completely. These functions have been migrated elsewhere.
    • Moves location of downgrade_pose_file to resolve a circular import.

@SkepticRaven SkepticRaven self-assigned this Oct 3, 2025
@SkepticRaven SkepticRaven changed the base branch from KLAUS-69-add-rendering-tools to main October 16, 2025 20:16
@SkepticRaven SkepticRaven merged commit 131f5c9 into main Oct 20, 2025
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@SkepticRaven SkepticRaven deleted the KLAUS-280-discard-pose-data-when-convex-hull-is-larger-than-expected-mouse-size branch October 20, 2025 13:04
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2 participants