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Merged
davewhipp merged 2 commits into from
Sep 22, 2025
Merged

Develop #67

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51a02ff
Fix MCMC example parameters
davewhipp Sep 17, 2025
4643ee7
Update Binder link
davewhipp Sep 22, 2025
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -5,7 +5,7 @@
[![Tests](https://github.com/HUGG/TC1D/actions/workflows/run-tests.yml/badge.svg)](https://github.com/HUGG/TC1D/actions/workflows/run-tests.yml)
[![Documentation Status](https://readthedocs.org/projects/tc1d/badge/?version=latest)](https://tc1d.readthedocs.io/en/latest/?badge=latest)
[![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0)
[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/HUGG/TC1D/HEAD?labpath=notebooks%2Fexplore_tc1d.ipynb)
[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/HUGG/TC1D/HEAD?urlpath=%2Flab%2Ftree%2Fnotebooks%2Fexplore_tc1d.ipynb)

T<sub>c</sub>1D is a one-dimensional thermal and thermochronometer age prediction model that can simulate the effects of various geodynamic and geomorphic processes on thermochronometer ages.
It currently supports prediction of apatite and zircon (U-Th)/He and fission-track ages.
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5 changes: 2 additions & 3 deletions src/tc1d/tc1d.py
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Expand Up @@ -2600,8 +2600,8 @@ def batch_run_mcmc(params, batch_params):

# BG: MCMC setup - number of walkers and initial positions sampled from uniform priors
nwalkers = 16
nsteps = 20
discard = 3
nsteps = 200
discard = 30
thin = 3

p0 = [
Expand Down Expand Up @@ -5064,5 +5064,4 @@ def run_model(params):

# Returns misfit for inverse_mode
if "misfit" in locals():
# print(f"- Returning misfit: {misfit}")
return misfit