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fix typed bug (#45) #46

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Merged
ch99l merged 1 commit into from
Sep 23, 2026
Merged

fix typed bug (#45) #46

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5 changes: 5 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -4,6 +4,11 @@ This file contains all notable changes to Bambu-Pipe.

---

## [v0.10.2] - 2026-09-23

### Fixed
- `--output_dir` is now typed as `String` instead of `Path`; typed `Path` params must already exist, so a new output directory failed validation when the trace, timeline, report and DAG reports (which create it first) were disabled

## [v0.10.1] - 2026-08-26

### Added
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2 changes: 1 addition & 1 deletion main.nf
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Expand Up @@ -31,7 +31,7 @@ params {
input: Path
genome: Path
annotation: Path
output_dir: Path
output_dir: String
chemistry: String?
technology: String?
bam_only: Boolean
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -2,7 +2,7 @@ manifest {
name = 'Bambu-Pipe'
description = 'Context-aware transcript quantification from long-read single-cell and spatial transcriptomics data'
author = 'Andre Sim, Chin Hao Lee, Min Hao Ling'
version = 'v0.10.1'
version = 'v0.10.2'
mainScript = 'main.nf'
nextflowVersion = '!>=26.04.0'
}
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