Add slurm/pbs job submission capability to lake-landice remapping#179

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mathomp4 wants to merge 5 commits intofeature/sdrabenh/gcm_v12from

feature/v12-slurm-lakelandice

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mathomp4 commented Feb 23, 2026 •

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This brings lake-landice remapping in line with upper_air and catch remapping, allowing it to run in batch queues on both NAS and NCCS.

The weird thing is, @sshakoor1 did this at some point but it got lost? Not sure. But this is Claude trying to bring it back

Add job configuration with NPE=1 (serial execution with MPI for MAPL)
Set walltime based on tile resolution: 30min for <=C360, 1hr for higher res
Create job script template with SLURM/PBS directives matching remap_upper.py
Add interactive vs batch mode detection (PBS_JOBID/SLURM_JOB_ID)
Refactor command execution to use esma_mpirun wrapper
Submit jobs via qsub (NAS) or sbatch (NCCS) when not in interactive session
Remove obsolete run_and_log method
Maintain backward compatibility: interactive mode behaves as before

This needs to be fully tested and looked over. Probably by me and @weiyuan-jiang and @biljanaorescanin

I'm keeping draft until tested.

ETA: Both @biljanaorescanin and @weiyuan-jiang have tested and we've updated the baselines.

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