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MalariaGEN pipelines

This repository is for developing portable open source pipelines for processing malaria parasite and mosquito genome sequence data.

This repository is jointly maintained by teams at the Wellcome Sanger Institute, Oxford University and the Broad Institute.

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Pipelines for processing malaria parasite and mosquito genome sequence data.

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  • WDL 51.7%
  • Python 38.6%
  • Dockerfile 8.5%
  • Shell 1.2%