The Stern Lab | Stowers Institute
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gene-annotation-refiner
gene-annotation-refiner PublicIntegrates multiple evidence sources (Helixer, StringTie, TransDecoder, RNA-seq) to produce refined GFF annotations with posterior probabilities. Designed for insect genomes.
Python 2
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Shiozaki_2024
Shiozaki_2024 PublicCode related to Shiozaki et al., 2024: Activity of nested neural circuits drives different courtship songs in Drosophila
MATLAB
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bicycle-gene-classifier
bicycle-gene-classifier PublicWe developed a linear logistic regression classifier using only structural features of bicycle genes that identified many putative bicycle homologs in other species.
R
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Repositories
- bicycle-gene-classifier Public
We developed a linear logistic regression classifier using only structural features of bicycle genes that identified many putative bicycle homologs in other species.
DavidSternLab/bicycle-gene-classifier’s past year of commit activity - ElectricalPenetrationGraph Public
DavidSternLab/ElectricalPenetrationGraph’s past year of commit activity - gene-annotation-refiner Public
Integrates multiple evidence sources (Helixer, StringTie, TransDecoder, RNA-seq) to produce refined GFF annotations with posterior probabilities. Designed for insect genomes.
DavidSternLab/gene-annotation-refiner’s past year of commit activity - DavidSternLab.github.io Public
DavidSternLab/DavidSternLab.github.io’s past year of commit activity - Shiozaki_2024 Public
Code related to Shiozaki et al., 2024: Activity of nested neural circuits drives different courtship songs in Drosophila
DavidSternLab/Shiozaki_2024’s past year of commit activity
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