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docs(completist): audit completist data and generate report - #4080

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docs(completist): audit completist data and generate report#4080
dieterolson wants to merge 6 commits into
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jules-12248824925126103807-8eacfe8f

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  • Collected Completist markers and artifacts.
  • Parsed codebase into .jules/completist_data.
  • Generated Completist issues in docs/assessments/issues.
  • Generated final Completist report in docs/assessments/completist/.

PR created automatically by Jules for task 12248824925126103807 started by @dieterolson

Co-authored-by: dieterolson <198168927+dieterolson@users.noreply.github.com>
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💡 Codex Review

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Reviewed commit: b67cd1f6e3

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## Critical Incomplete (Top 50)
| File | Line | Type | Impact | Coverage | Complexity |
|---|---|---|---|---|---|
| `src/shared/python/ai/integrations/github_mcp/integration.py` | 36 | Stub | 5 | 3 | 4 |

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P2 Badge Exclude protocol declarations from incomplete stubs

Remove these Protocol method declarations from the critical-gap set: the referenced ... bodies intentionally define structural typing contracts, and concrete implementations are supplied by conforming classes or test fakes. Treating them as missing logic inflates the reported 130 critical gaps and generated ten false critical issue files, directing the Completist toward code that must remain declaration-only.

AGENTS.md reference: AGENTS.md:L410-L418

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@@ -1,28 +0,0 @@
---

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P2 Badge Preserve referenced assessment artifacts

Do not delete this artifact without updating its consumers: docs/assessments/A-N_Assessment_2026-04-17.md:214 and docs/assessments/assessment_summary.json:258 still cite this exact path as security evidence. The commit similarly removes several other referenced issue documents, leaving assessment navigation and machine-readable evidence entries dangling.

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Comment on lines +92 to +95
| `./generate_real_assessments.py` | todos = run_cmd("grep -rnw 'TODO' src/ \| wc -l").strip() | TRACKED_TASK |
| `./scripts/generate_comprehensive_assessment.py` | stats["todos"] += content.count("TODO") | TRACKED_TASK |
| `./scripts/generate_comprehensive_assessment.py` | grades["O"] = (max(0, score_o), f"Technical Debt (TODO+FIXME): {debt}") | TRACKED_TASK |
| `./tests/tools/test_matlab_quality_utils.py` | Path("script.m"), "% TODO: fix this", 5, issues | TRACKED_TASK |

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P2 Badge Filter scanner and fixture literals from feature gaps

Exclude these lexical matches before counting feature gaps: the rows are the assessment generator searching for TODO, code that counts the token, and a test fixture verifying marker detection—not outstanding implementations. Including them as TRACKED_TASK findings makes the executive count and implementation order inaccurate; the Completist scope calls for actual tracked incomplete work rather than occurrences inside its own tooling and tests.

AGENTS.md reference: AGENTS.md:L410-L418

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@dieterolson
dieterolson enabled auto-merge (squash) August 2, 2026 15:00
@dieterolson dieterolson mentioned this pull request Aug 2, 2026
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Performance Benchmark Results

No benchmark results available.

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⚠️ SPEC.md Update Required

Source files were modified in this PR but SPEC.md was not updated.

Per the Specification-Driven Development Policy:

  • Any PR that adds, removes, or changes functionality must update SPEC.md
  • Update the relevant sections (features, architecture, tests, dependencies, etc.)
  • Bump the Spec Version if making substantive changes

To resolve:

  1. Update SPEC.md to reflect your changes, OR
  2. Add the spec-exempt label if this PR genuinely doesn't affect the spec (e.g., pure refactor with no behavior change)

This check is enforced by the spec-check CI workflow.

google-labs-jules Bot and others added 2 commits August 4, 2026 16:52
Co-authored-by: dieterolson <198168927+dieterolson@users.noreply.github.com>
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Superseded by #4450 (CONS-A4), which merges this PR together with #4411 into one merge boundary.

Containment verified by ancestry, not by title: verify_coverage.sh reports covered=2 NOT-covered=0 against consolidated/docs-pendulum-2026-08-13, so this branch is a true ancestor of #4450 and closing this drops nothing. The branch is not deleted.

Carried forward: the 5 .jules/completist_data/*.txt scan outputs, Completist_Report_2026-08-02.md, the 12 new Issue_0NN_*.md, the 4 renames, the COMPLETIST_LATEST.md refresh, and — the most immediately valuable part — the two fleet-load fixes hoisting cheap if: pre-filters onto the pick-runner jobs of Jules-Issue-Mention-Handler.yml and PR-Comment-Responder.yml, so a non-matching comment now costs zero d-sorg-fleet capacity instead of occupying two runners to be skipped one job later.

Two things in this branch were reverted, both documented in #4450:

  1. 90 deleted documentation files were restored. This branch removed 19 dated historical Completist_Report_*.md (2026-03-08 through 2026-07-23), 7 hand-written docs/assessments/issues/ISSUE_*.md, 57 generated Issue_NNNN_*.md, and docs/development/professional-scada-epic.md. That is an agent regression rather than tool behaviour or a retention policy: the PR body describes only collecting markers and generating a report, and scripts/analyze_completist_data.py contains no unlink, rmtree, or remove — it only globs ISSUES_DIR to deduplicate and count. 19 months of dated reports were being kept on main, and the new report's own trend visualisation depends on that history. The regenerated set also restarts numbering at Issue_005 instead of continuing from Issue_2027, so it is not a superset of what it removed. Deliberate pruning, if wanted, belongs in its own reviewable PR.

  2. ~290 files of repo-wide pre-commit churn were reverted to main. Commits ba3730ac1, 35bec2d99 and c70755ba1 were produced by a ruff build that disagrees with the CI-pinned 0.14.10: 281 of 299 changed .py files failed ruff format --check under the pinned version — the same red-gate mode that blocked 🎨 Palette & Bolt Suite: Form Submission, Accessibility, SVG & CSV Optimizations #4429/Codex Flight Suite: Consolidated Agent Flight and Metric Models #4437/Codex Rate of Closure Suite: Consolidated Agent Camera, Attribution and Execution Workflows #4439. The churn also displaced # noqa comments, producing 9 live F841 errors in tests/unit/sidekick/test_sidekick_ux_hardening.py, a UP017 rewrite in test_action_audit.py, and two lost SLF001 suppressions in test_sidekick_f4_collaborators.py. 280 of the 295 modified .py files were proven content-neutral first (each blob and main's blob normalise to identical bytes under one identical ruff 0.14.10 pass); the other 15 were reverted on provenance, none being owned by a docs-only task.

Also reverted: this branch's .jules/bolt.md change, which removed the two Bolt learnings main gained from #4071 and #4176 after the branch forked — a stale-base artifact.

Auto-merge was disarmed here before #4450 was opened so this cannot merge itself and duplicate the content.

auto-merge was automatically disabled August 14, 2026 04:53

Pull request was closed

dieterolson added a commit that referenced this pull request Aug 15, 2026
…diagnostics (#4450)

CONS-A4. Consolidates the last two remaining open Tools PRs into one squash commit.

Supersedes and closes:
  * #4080  jules-12248824925126103807-8eacfe8f  - completist data audit + report
  * #4411  research/shoulder-velocity-drift-transfer - pendulum drift-transfer

Containment verified by ancestry before either was closed: verify_coverage.sh
reported covered=2 NOT-covered=0 against consolidated/docs-pendulum-2026-08-13,
so both head refs are true ancestors of this commit.

Two unrelated subsystems kept in one PR because they provably do not interfere -
#4411 merged into #4080 with zero conflicts and their final file sets are
disjoint - and because every extra PR costs ~28 workflow runs and ~4 self-hosted
fleet slots, which is the problem this consolidation drive exists to fix.

From #4411 (closes #4406, supports D-sorganization/UpstreamDrift#8551): a
model-neutral transfer-signal contract with exact drift/control grip-force
closure checks, phase-window work/braking/impulse metrics, mixed-objective
Pareto ranking, a qualified double-pendulum adapter, and a PyQt Drift Transfer
tab that fails closed for unqualified model tiers. Carried across byte-for-byte
from its own head, which forked from current main and so is free of the
formatting churn #4080 swept through src/pendulum_simulator/.

From #4080: regenerated completist scan data (5 .jules/completist_data/*.txt),
Completist_Report_2026-08-02.md, 6 new Issue_0NN_*.md, 4 renames, the
COMPLETIST_LATEST.md refresh, and - the most immediately valuable part - two
fleet-load fixes hoisting cheap `if:` pre-filters onto the pick-runner jobs of
Jules-Issue-Mention-Handler.yml and PR-Comment-Responder.yml, so a non-matching
comment costs zero d-sorg-fleet capacity instead of occupying two runners to be
skipped one job later.

Reverted from #4080:
  * 90 deleted documentation files restored - 19 dated historical
    Completist_Report_*.md (2026-03-08..2026-07-23), 7 hand-written
    docs/assessments/issues/ISSUE_*.md, 57 generated Issue_NNNN_*.md, and
    docs/development/professional-scada-epic.md. An agent regression, not tool
    behaviour: the PR body describes no deletion, and
    scripts/analyze_completist_data.py has no unlink/rmtree/remove - it only
    globs ISSUES_DIR to deduplicate and count. The regenerated set also restarts
    numbering at Issue_005 instead of continuing from Issue_2027, so it is not a
    superset of what it removed.
  * A stale-base removal of the two Bolt learnings main gained from #4071/#4176.
  * ~290 files of pre-commit formatting churn (commits ba3730a, 35bec2d,
    c70755b). It was produced by a ruff build disagreeing with the CI-pinned
    0.14.10 - 281 of 299 changed .py files failed ruff format --check under the
    pin - it displaced `# noqa` comments into uselessness (9 live F841 errors,
    a UP017 rewrite, 2 lost SLF001 suppressions), and it reformatted
    ruff-excluded trees. 280 of 295 were proven content-neutral by
    format-normalisation before reverting; the other 15 by provenance.
  * 6 committed .codex-worktrees/ gitlinks removed (unreachable on any remote).

Net: 323 files -> 29; 299 changed .py files -> 5.

Closes #4406

Verification: ruff check + ruff format --check clean under the CI-pinned 0.14.10;
0 files fall inside CI's gated set since the only changed .py are the 5 under the
excluded src/pendulum_simulator/ tree, checked anyway and clean;
double_pendulum_golf.transfer_strategy imports cleanly; no conflict markers; no
bare `from datetime import UTC`; zero gitlinks. #4411's pytest run could not be
completed locally - pytest-qt aborts with ImportError on QtCore, the known
PyQt6 6.10 / Qt6Core.dll fault on that machine, not a defect.
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