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Implement FASTA/FASTQ parser for #60 #97

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Implement FASTA/FASTQ parser for #60 #97

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7ff8326
test: add acceptance tests for #60
crashfrog May 28, 2026
64dffbf
feat: implement FASTA/FASTQ parser for issue #60
crashfrog May 29, 2026
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2 changes: 1 addition & 1 deletion phraya-core/Cargo.toml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[package]
name = "phraya-core"
version = "0.1.0"
edition = "2026"
edition = "2021"

[dependencies]
serde = { workspace = true }
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6 changes: 6 additions & 0 deletions phraya-core/src/lib.rs
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Original file line number Diff line number Diff line change
@@ -1,6 +1,12 @@
// Module declarations
pub mod types;

// Re-export main types for convenience
pub use types::{
AlignmentError, CoverageTrack, EvidenceLayer, FilterError, IoError, ParseError, Sequence,
VariantObservation,
};

/// Represents a detected tandem repeat region in a sequence.
///
/// A tandem repeat is a pattern of nucleotides that repeats multiple times in succession.
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7 changes: 6 additions & 1 deletion phraya-io/Cargo.toml
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@@ -1,6 +1,11 @@
[package]
name = "phraya-io"
version = "0.1.0"
edition = "2024"
edition = "2021"

[dependencies]
phraya-core = { path = "../phraya-core" }
flate2 = "1.0"

[dev-dependencies]
tempfile = "3.8"
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