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feat(deeptools): complete deeptools pipeline with plotHeatmap/plotProfile outputs and documentation - #154

Merged

kopardev merged 7 commits into

mainfrom

Sep 29, 2026

Merged

feat(deeptools): complete deeptools pipeline with plotHeatmap/plotProfile outputs and documentation#154
kopardev merged 7 commits into
mainfrom
issue_7

Commits on Sep 28, 2026
- docs: add deeptools output explanations
  kopardev
  committed
  bcfe49f
- fix(deeptools): make matrix windows configurable
  kopardev
  committed
  ff079b1
- fix(logging): record failed rule in pipeline status
  kopardev
  committed
  743addf
- feat(dryrun): suppress NEXT prompt when nothing to be done
  kopardev
  committed
  754e42a
- feat(deeptools): add plotHeatmap/plotProfile rule and wire outputs into rule all
  kopardev
  committed
  9cccf04
Commits on Sep 29, 2026
- [pre-commit.ci] auto fixes from pre-commit.com hooks
  pre-commit-ci[bot]
  committed
  32bfdfd
- docs(outputs): clarify deepTools summaries and widen tables
  kopardev
  committed
  5adbde9