From 796a4ee078db5f1063dd4aa923801e5981823979 Mon Sep 17 00:00:00 2001 From: Seb Rauschert Date: Tue, 3 Jun 2025 15:51:18 +0800 Subject: [PATCH] Added 'rnorvegicus' to the check_organism() function. 'rat' is not accepted as an argument for get_collectri() --- R/utils-omnipath.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/utils-omnipath.R b/R/utils-omnipath.R index 5387976..e5f9a01 100644 --- a/R/utils-omnipath.R +++ b/R/utils-omnipath.R @@ -443,7 +443,7 @@ check_organism <- function(organism) { ) if (!ncbi_tax_id %in% c(9606L, 10090L, 10116L)){ stop(sprintf( - "Organism can only be human or mouse or rat, `%s` provided.", + "Organism can only be human or mouse or rat (rnorvegicus), `%s` provided.", ncbi_tax_id )) }