From ca62e470b3cd4523d18896a99ecfe903eea9f1bf Mon Sep 17 00:00:00 2001
From: Katharine Chen <43553196+kychen37@users.noreply.github.com>
Date: Thu, 31 Aug 2023 10:55:39 -0700
Subject: [PATCH] add htseq and scipy to Dockerfile

---
 Dockerfile | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 070e76d..a37c7e8 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -11,7 +11,9 @@ RUN mamba install -y -c conda-forge -c bioconda \
     plotnine \
     seaborn \
     regex \
-    snakemake-minimal
+    snakemake-minimal \
+    htseq
 
-RUN mamba install -y -c conda-forge altair
+RUN mamba install -y -c conda-forge altair \
+    scipy
 RUN pip install skimpy