If we are to leverage the use of adding type-hints (as you've done in the functions that have been doc-stringed), we should add this to the pre-commit config:
- repo: https://github.com/pre-commit/mirrors-mypy
rev: "v1.13.0"
hooks:
- id: mypy
files: "(src|tests)"
This will likely uncover places where the types are incorrect. I notice, for example:
def stack_slices_center(
center_slice: AnnData,
slices: list[AnnData],
pis: list[np.ndarray],
...
While I'm pretty sure pis is a torch.Tensor (if not, the calling function is probably mis-typed as well).
If we are to leverage the use of adding type-hints (as you've done in the functions that have been doc-stringed), we should add this to the pre-commit config:
This will likely uncover places where the types are incorrect. I notice, for example:
While I'm pretty sure
pisis atorch.Tensor(if not, the calling function is probably mis-typed as well).