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phylogenetic: support standardized multiple input #324

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@joverlee521

We have converged on a generic pattern for defining multiple inputs in nextstrain/pathogen-repo-guide#91.

This will be added in addition to the custom config params currently used for the inrb builds

# INRB builds inject private data, which is itself created by calling `curate_private_data.py`
private_sequences: "data/sequences-private.fasta"
private_metadata: "data/metadata-private.tsv"

Noting that the current workflow merges the private data after the filter rule to bypass the filter query. The new pattern would merge before the filter rule.

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