From 493b7225134f8768072aec7a1ae46d4d6708f45a Mon Sep 17 00:00:00 2001 From: Jover Lee Date: Mon, 13 Jul 2026 13:08:09 -0700 Subject: [PATCH] docs: fix AUGUR_SEARCH_PATH precedence order Follow up to changes made for --- docs/usage/envvars.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/usage/envvars.rst b/docs/usage/envvars.rst index 50f42d0a1..a8386d2df 100644 --- a/docs/usage/envvars.rst +++ b/docs/usage/envvars.rst @@ -11,7 +11,7 @@ These can be especially useful in the context of an entire pipeline or workflow If set, ``augur subsample`` will search these directories for relative filepaths specified in the config file. Multiple directories can be set by separating them with colons (e.g., ``/path/one:/path/two``). - This takes precedence over the ``--search-paths`` command line argument. + The ``--search-paths`` command line argument takes precedence over this environment variable. .. envvar:: AUGUR_DEBUG