diff --git a/.github/workflows/README.md b/.github/workflows/README.md index 7590d39c6..6935dc73a 100644 --- a/.github/workflows/README.md +++ b/.github/workflows/README.md @@ -11,20 +11,26 @@ Currently retrieves: - Software module list from [modules-list](https://github.com/nesi/modules-list). - Glossary, spellcheck dictionary and snippets from [nesi-wordlist](https://github.com/nesi/nesi-wordlist) -It then runs [link_apps_pages.py](#link_apps_pagespy). +It then runs [compile_tags.py](#compile_tagspy). All modified files are added to a new branch called `new-assets` and merged into main. In theory, all this could be done at deployment, but I wanted to make sure that changes to these remote files didn't break anything. -## [link_apps_pages.py](link_apps_pages.py) +## [compile_tags.py](compile_tags.py) -A Python script used to add a link to the appropriate documentation to [modules-list.json](../../docs/assets/module-list.json). +Replaces the old `link_apps_pages.py`. -The script checks all titles of input files, and sets the `support` key to be equal to the pages url. -It also adds whatever tags are on that page to the `domains` key. +Validates page tags against the canonical vocabulary in [`docs/assets/tags.yml`](../../docs/assets/tags.yml), writes two compiled indexes, and links app pages to the module list: -_One day I would like to simplify this whole thing._ +- **`docs/assets/tag-index.json`** — maps each canonical tag to the list of pages that carry it. Used by the `pages_with_tag()` macro at render time. +- **`docs/assets/module-list.json`** — updated with support-page URLs and canonical domain tags for each application. + +Any tag not present in `tags.yml` (as a key or alias) produces a CI warning. Unknown tags are silently dropped from the index. + +### Tag vocabulary + +Tags are defined in [`docs/assets/tags.yml`](../../docs/assets/tags.yml). Each entry has a canonical key (snake\_case), a display label, and optional aliases. Pages should always use canonical keys; aliases are accepted for backwards compatibility but are normalised at compile time. ## [checks.yml](checks.yml) diff --git a/.github/workflows/checks.yml b/.github/workflows/checks.yml index 37df036f1..deaeb219d 100644 --- a/.github/workflows/checks.yml +++ b/.github/workflows/checks.yml @@ -162,15 +162,24 @@ jobs: run: | shopt -s globstar extglob python3 checks/run_slurm_lint.py ${{needs.get.outputs.filelist}} + tagcheck: + name: Check tags + runs-on: ubuntu-24.04 + steps: + - uses: actions/checkout@v6 + - run: pip3 install pyyaml + - run: python3 .github/workflows/compile_tags.py + testBuild: name: Test build if: ${{github.event_name != 'workflow_dispatch' || inputs.testBuild}} runs-on: ubuntu-24.04 - needs: get + needs: [get, tagcheck] steps: - uses: actions/checkout@v6 with: fetch-depth: 0 - run: pip3 install -r requirements.txt + - run: python3 .github/workflows/compile_tags.py - run: ./checks/run_test_build.py - run: export NO_MKDOCS_2_WARNING="1"; python3 checks/run_aria_check.py diff --git a/.github/workflows/compile_tags.py b/.github/workflows/compile_tags.py new file mode 100644 index 000000000..5cfa2d2c1 --- /dev/null +++ b/.github/workflows/compile_tags.py @@ -0,0 +1,109 @@ +#!/usr/bin/env python3 + +""" +Validates page tags, links app pages to the module list, and writes compiled indexes. + +Run during CI lint checks to surface tag warnings. +Run on deploy to ensure tag-index.json and module-list.json are up to date before building. + +Replaces: link_apps_pages.py +""" + +import os +import re +import json +import yaml +import sys +from pathlib import Path + + +TAGS_VOCAB_PATH = os.getenv("TAGS_VOCAB_PATH", "docs/assets/tags.yml") +TAG_INDEX_PATH = os.getenv("TAG_INDEX_PATH", "docs/assets/tag-index.json") +MODULE_LIST_PATH = os.getenv("MODULE_LIST_PATH", "docs/assets/module-list.json") +DOC_ROOT = os.getenv("DOC_ROOT", "docs") +APPS_PAGES_PATH = os.getenv("APPS_PAGES_PATH", "Software/Available_Applications") +BASE_URL = os.getenv("BASE_URL", "https://www.docs.nesi.org.nz") + + +def load_vocabulary(path): + vocab = yaml.safe_load(open(path)) + alias_map = {} + for canonical, entry in vocab.items(): + alias_map[canonical.lower()] = canonical + for alias in (entry.get("aliases") or []): + alias_map[alias.lower()] = canonical + return vocab, alias_map + + +def parse_frontmatter(path): + content = path.read_text() + match = re.match(r"---\n([\s\S]*?)---", content) + if not match: + return None + return yaml.safe_load(match.group(1)) or {} + + +def title_from_path(md_file): + name = md_file.stem.replace("_", " ") + return name[0].upper() + name[1:] + + +vocab, alias_map = load_vocabulary(TAGS_VOCAB_PATH) +module_list = json.load(open(MODULE_LIST_PATH)) + +tag_index = {canonical: [] for canonical in vocab} +warnings = 0 + +for md_file in sorted(Path(DOC_ROOT).rglob("*.md")): + rel = str(md_file.relative_to(DOC_ROOT)) + meta = parse_frontmatter(md_file) + + if meta is None: + print(f"::warning file={md_file},title=meta.parse::Meta block missing or malformed.") + warnings += 1 + continue + + raw_tags = meta.get("tags") or [] + title = meta.get("title") or title_from_path(md_file) + canonical_tags = [] + + for tag in raw_tags: + canonical = alias_map.get(str(tag).lower()) + if canonical is None: + print(f"::warning file={md_file},title=tag.unknown::Unknown tag '{tag}' on '{title}'. Add to {TAGS_VOCAB_PATH} or use an existing alias.") + warnings += 1 + else: + entry = {"title": title, "path": rel} + if entry not in tag_index[canonical]: + tag_index[canonical].append(entry) + canonical_tags.append(canonical) + + # For app pages: update support URL and merge canonical tags into module domains. + is_app_page = str(md_file.relative_to(DOC_ROOT)).startswith(APPS_PAGES_PATH) + if is_app_page and md_file.name != "index.md": + app = meta.get("title") or title_from_path(md_file) + if app in module_list: + page_link = f"{BASE_URL}/{APPS_PAGES_PATH}/{app}" + existing = module_list[app].get("support", "") + if existing and existing != page_link: + print(f"::warning file={md_file},title=docpath.change::Support URL for '{app}' changed from '{existing}' to '{page_link}'.") + module_list[app]["support"] = page_link + for canonical in canonical_tags: + if canonical not in module_list[app]["domains"]: + module_list[app]["domains"].append(canonical) + else: + print(f"::warning file={md_file},title=missing.module::'{md_file.name}' has no corresponding module in {MODULE_LIST_PATH}.") + warnings += 1 + +tag_index = {k: v for k, v in tag_index.items() if v} + +with open(TAG_INDEX_PATH, "w") as f: + f.write(json.dumps(tag_index, indent=4)) + +with open(MODULE_LIST_PATH, "w") as f: + f.write(json.dumps(module_list, indent=4)) + +print(f"tag-index.json: {len(tag_index)} tags, {sum(len(v) for v in tag_index.values())} entries.") +print(f"module-list.json: updated support URLs and domains for app pages.") +if warnings: + print(f"::warning::{warnings} warning(s) issued. Review and address before merging.") diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml index 5c48f7adb..ca7bfc531 100644 --- a/.github/workflows/deploy.yml +++ b/.github/workflows/deploy.yml @@ -51,6 +51,8 @@ jobs: run: pip install -r requirements.txt - name: Fetch Remote Files run: bash .github/fetch_includes.sh + - name: Compile tag index and link app pages + run: python3 .github/workflows/compile_tags.py - name: Build documentation run: | mkdocs build --clean --quiet diff --git a/docs/Announcements/Accessing_NeSI_Support_during_the_Easter_break.md b/docs/Announcements/Accessing_NeSI_Support_during_the_Easter_break.md index b17245a34..d111db688 100644 --- a/docs/Announcements/Accessing_NeSI_Support_during_the_Easter_break.md +++ b/docs/Announcements/Accessing_NeSI_Support_during_the_Easter_break.md @@ -2,8 +2,7 @@ description: A page sharing the details of reduced support hours over Easter and ANZAC break created_at: '2024-03-20T01:58:22Z' tags: - - easter - - holidays + - announcement title: Accessing REANNZ HPC Support during the Easter and ANZAC holidays search: boost: 0.1 diff --git a/docs/Announcements/Identity_Changes_for_Crown_Research_Institutes.md b/docs/Announcements/Identity_Changes_for_Crown_Research_Institutes.md index 58798ef03..7f4cdab00 100644 --- a/docs/Announcements/Identity_Changes_for_Crown_Research_Institutes.md +++ b/docs/Announcements/Identity_Changes_for_Crown_Research_Institutes.md @@ -4,8 +4,8 @@ status: new search: boost: 10 tags: - - identity - - email + - access + - slurm --- ## What is happening diff --git a/docs/Announcements/Known_Issues_HPC3.md b/docs/Announcements/Known_Issues_HPC3.md index 734f557dd..1c6d60514 100644 --- a/docs/Announcements/Known_Issues_HPC3.md +++ b/docs/Announcements/Known_Issues_HPC3.md @@ -1,10 +1,9 @@ --- created_at: 2025-04-28 description: List of features currently missing from Mahuika (HPC3). -tags: - - hpc3 - - refresh - - mahuika +tags: + - release_notes + - announcement --- Below is a list issues that we're actively working on. We hope to have these resolved soon. This is intended to be a temporary page. diff --git a/docs/Announcements/Release_Notes/index.md b/docs/Announcements/Release_Notes/index.md index 3b6911323..e30e62dab 100644 --- a/docs/Announcements/Release_Notes/index.md +++ b/docs/Announcements/Release_Notes/index.md @@ -1,6 +1,7 @@ --- created_at: '2021-02-23T19:52:34Z' -tags: [] +tags: +- release_notes title: Release Notes --- diff --git a/docs/Announcements/Slurm_Job_email.md b/docs/Announcements/Slurm_Job_email.md index aebb22a51..af49f6a0b 100644 --- a/docs/Announcements/Slurm_Job_email.md +++ b/docs/Announcements/Slurm_Job_email.md @@ -1,10 +1,9 @@ --- created_at: 2026-02-11 description: Email from Slurm Jobs now available -tags: - - hpc3 - - email - - mahuika +tags: + - release_notes + - slurm --- Sending email from Slurm jobs is now available on Mahuika. Here is an example of the Slurm parameters required to send email: diff --git a/docs/Batch_Computing/Batch_Computing_Guide.md b/docs/Batch_Computing/Batch_Computing_Guide.md index 38d71b3fa..87c5eb0fb 100644 --- a/docs/Batch_Computing/Batch_Computing_Guide.md +++ b/docs/Batch_Computing/Batch_Computing_Guide.md @@ -3,7 +3,7 @@ created_at: 2025-12-19 description: Guide to batch computing tags: - slurm - - ondemand + - interactive --- Batch jobs can be submitted via several methods. The most basic is a [simple Slurm job](#slurm-job-basics). diff --git a/docs/Batch_Computing/Checking_resource_usage.md b/docs/Batch_Computing/Checking_resource_usage.md index be479bfbc..9d4ea3ab3 100644 --- a/docs/Batch_Computing/Checking_resource_usage.md +++ b/docs/Batch_Computing/Checking_resource_usage.md @@ -2,7 +2,7 @@ created_at: '2022-02-15T01:13:51Z' tags: - slurm - - accounting + - account status: deprecated --- diff --git a/docs/Batch_Computing/Fair_Share.md b/docs/Batch_Computing/Fair_Share.md index b53818d45..e9d505508 100644 --- a/docs/Batch_Computing/Fair_Share.md +++ b/docs/Batch_Computing/Fair_Share.md @@ -1,14 +1,10 @@ --- created_at: '2019-02-05T03:58:21Z' tags: - - accounting - - Slurm - - Fairshare - - Fair Share - - Job priority - - Long queue time - - Queing - - long wait time + - account + - slurm + - fairshare + - troubleshooting description: How balancing your workload lets you make the most of your allocation. --- diff --git a/docs/Batch_Computing/Hardware.md b/docs/Batch_Computing/Hardware.md index 4bfdc01ea..51da4ada9 100644 --- a/docs/Batch_Computing/Hardware.md +++ b/docs/Batch_Computing/Hardware.md @@ -3,7 +3,6 @@ created_at: '2022-06-13T04:54:38Z' description: This page below outlines the available hardware. tags: - gpu - - compute --- A list of the currently available hardware. diff --git a/docs/Batch_Computing/Job_Arrays.md b/docs/Batch_Computing/Job_Arrays.md index 8b92fb64b..3b69af0f7 100644 --- a/docs/Batch_Computing/Job_Arrays.md +++ b/docs/Batch_Computing/Job_Arrays.md @@ -1,10 +1,9 @@ --- created_at: 2025-12-09 description: How to utilise job arrays. -tags: +tags: - slurm - parallel - - array --- diff --git a/docs/Batch_Computing/Job_Limits.md b/docs/Batch_Computing/Job_Limits.md index 5004ca4b9..3f0492a74 100644 --- a/docs/Batch_Computing/Job_Limits.md +++ b/docs/Batch_Computing/Job_Limits.md @@ -1,9 +1,9 @@ --- created_at: 2025-07-17 description: What limits are there on running jobs. -tags: - - Slurm - - accounting +tags: + - slurm + - account --- These are open for review if you find any of them unreasonable or inefficient. diff --git a/docs/Batch_Computing/Job_prioritisation.md b/docs/Batch_Computing/Job_prioritisation.md index 66b151349..e4214207a 100644 --- a/docs/Batch_Computing/Job_prioritisation.md +++ b/docs/Batch_Computing/Job_prioritisation.md @@ -1,9 +1,9 @@ --- created_at: '2018-05-17T23:35:36Z' description: What factors are used to determine a jobs prioroty. -tags: - - Slurm - - accounting +tags: + - slurm + - account --- Each queued job has a priority score. Jobs start when sufficient diff --git a/docs/Batch_Computing/SLURM-Best_Practice.md b/docs/Batch_Computing/SLURM-Best_Practice.md index c0dae4dab..d813f0578 100644 --- a/docs/Batch_Computing/SLURM-Best_Practice.md +++ b/docs/Batch_Computing/SLURM-Best_Practice.md @@ -2,7 +2,6 @@ created_at: '2019-01-18T01:56:15Z' tags: - slurm - - tips title: 'SLURM: Best Practice' description: Some tips on how to get more out of the job sceduler. --- diff --git a/docs/Batch_Computing/Temporary_directories.md b/docs/Batch_Computing/Temporary_directories.md index 43adfbb71..aa9f1b33c 100644 --- a/docs/Batch_Computing/Temporary_directories.md +++ b/docs/Batch_Computing/Temporary_directories.md @@ -1,11 +1,7 @@ --- created_at: '2023-07-21T04:10:04Z' -tags: +tags: - storage - - tmpdir - - tmp - - temp - - localscratch description: How temporary files are utilised on the REANNZ cluster. --- diff --git a/docs/Batch_Computing/Using_GPUs.md b/docs/Batch_Computing/Using_GPUs.md index 047cfc627..e77b647f6 100644 --- a/docs/Batch_Computing/Using_GPUs.md +++ b/docs/Batch_Computing/Using_GPUs.md @@ -2,7 +2,7 @@ created_at: '2020-04-19T22:59:58Z' tags: - gpu -- Slurm +- slurm --- This page provides generic information about how to access GPUs through the Slurm scheduler. @@ -307,6 +307,6 @@ To record the GPU utilisation and GPU memory, see [Measuring GPU efficiency afte ## Application and toolbox specific support pages -See the [Supported Applications](../Software/Available_Applications/index.md) for more information on what softwares have GPU support, as well as programming toolkits: - -- [NVIDIA GPU Containers](../Software/Containers/NVIDIA_GPU_Containers.md) +{% for p in pages_with_tag("gpu") %} +- [{{ p.title }}]({{ p.path }}) +{% endfor %} diff --git a/docs/Data_Transfer/Checksums.md b/docs/Data_Transfer/Checksums.md index 59c627fa5..5548f9b7e 100644 --- a/docs/Data_Transfer/Checksums.md +++ b/docs/Data_Transfer/Checksums.md @@ -1,11 +1,8 @@ --- created_at: '2020-01-14T22:10:50Z' -tags: +tags: - checksum - - md5 - - sha - - hash - - digest + - announcement --- Applying a *checksum function* to a file will return its *message digest* (also simply referred to as a _checksum_), which is akin to a digital fingerprint. diff --git a/docs/Data_Transfer/Data_Transfer_Overview.md b/docs/Data_Transfer/Data_Transfer_Overview.md index 187881a10..e11f81215 100644 --- a/docs/Data_Transfer/Data_Transfer_Overview.md +++ b/docs/Data_Transfer/Data_Transfer_Overview.md @@ -1,5 +1,7 @@ --- created_at: '2018-11-20T22:41:32Z' +tags: +- file_transfer --- !!! prerequisite diff --git a/docs/Data_Transfer/Data_Transfer_Using_MobaXterm.md b/docs/Data_Transfer/Data_Transfer_Using_MobaXterm.md index eee735b44..5de91ea08 100644 --- a/docs/Data_Transfer/Data_Transfer_Using_MobaXterm.md +++ b/docs/Data_Transfer/Data_Transfer_Using_MobaXterm.md @@ -1,8 +1,8 @@ --- created_at: 2026-02-04 description: How to copy files to the REANNZ HPC using MobaXterm. -tags: - - data transfer +tags: + - file_transfer title: MobaXterm (Windows) --- diff --git a/docs/Data_Transfer/Data_Transfer_Using_OnDemand.md b/docs/Data_Transfer/Data_Transfer_Using_OnDemand.md index 3095a5693..864567ac3 100644 --- a/docs/Data_Transfer/Data_Transfer_Using_OnDemand.md +++ b/docs/Data_Transfer/Data_Transfer_Using_OnDemand.md @@ -1,8 +1,8 @@ --- created_at: 2026-01-05 description: How to transfer data on the REANNZ HPC using OnDemand. -tags: - - OnDemand +tags: + - interactive --- !!! info "Note" diff --git a/docs/Data_Transfer/Data_Transfer_Using_WinSCP.md b/docs/Data_Transfer/Data_Transfer_Using_WinSCP.md index 2ee3dab2c..c58ae4190 100644 --- a/docs/Data_Transfer/Data_Transfer_Using_WinSCP.md +++ b/docs/Data_Transfer/Data_Transfer_Using_WinSCP.md @@ -1,11 +1,8 @@ --- created_at: 2026-02-04 description: How to copy files to the REANNZ HPC using WinSCP. -tags: - - data transfer - - ftp - - sftp - - scp +tags: + - file_transfer title: WinSCP (Windows) --- diff --git a/docs/Data_Transfer/FileSender.md b/docs/Data_Transfer/FileSender.md index d2b02864f..89fa3b845 100644 --- a/docs/Data_Transfer/FileSender.md +++ b/docs/Data_Transfer/FileSender.md @@ -2,10 +2,7 @@ created_at: 2026-01-05 description: How to share data from the REANNZ HPC using FileSender. tags: - - sharing - - share - - filesender - - secure + - file_transfer --- FileSender is a service that allows users to share data easily and securely. It is possible to send and receive data _via_ a web-based graphical user interface (GUI) as well as a Command Line Interface (CLI) using the Filesender API. These instructions show how to use both the web-based GUI and command line to send and receive data using FileSender. diff --git a/docs/Data_Transfer/File_Managers.md b/docs/Data_Transfer/File_Managers.md index f62e9000e..85b429d32 100644 --- a/docs/Data_Transfer/File_Managers.md +++ b/docs/Data_Transfer/File_Managers.md @@ -1,5 +1,8 @@ --- created_at: 2026-01-05 +tags: +- file_transfer +- access --- !!! prerequisite diff --git a/docs/Data_Transfer/Filesystem_Mounts_using_SSHFS.md b/docs/Data_Transfer/Filesystem_Mounts_using_SSHFS.md index eaf55afa6..3b142dfd6 100644 --- a/docs/Data_Transfer/Filesystem_Mounts_using_SSHFS.md +++ b/docs/Data_Transfer/Filesystem_Mounts_using_SSHFS.md @@ -1,6 +1,9 @@ --- created_at: '2018-11-27T23:55:26Z' description: Information on how to use SSHFS on different local systems +tags: +- file_transfer +- access --- !!! prerequisite diff --git a/docs/Data_Transfer/Globus/Add_Your_Computer_To_Globus.md b/docs/Data_Transfer/Globus/Add_Your_Computer_To_Globus.md index e22cc08f2..715562a53 100644 --- a/docs/Data_Transfer/Globus/Add_Your_Computer_To_Globus.md +++ b/docs/Data_Transfer/Globus/Add_Your_Computer_To_Globus.md @@ -1,7 +1,7 @@ --- created_at: '2018-05-29T04:01:33Z' -tags: -- globus +tags: +- file_transfer title: Add your Computer to Globus --- diff --git a/docs/Data_Transfer/Globus/Bookmarks.md b/docs/Data_Transfer/Globus/Bookmarks.md index 27cc04eae..6a8b03369 100644 --- a/docs/Data_Transfer/Globus/Bookmarks.md +++ b/docs/Data_Transfer/Globus/Bookmarks.md @@ -1,7 +1,7 @@ --- created_at: '2018-05-29T04:01:33Z' -tags: -- globus +tags: +- file_transfer title: Bookmarks --- diff --git a/docs/Data_Transfer/Globus/Data_Transfer_Between_Personal_Endpoints.md b/docs/Data_Transfer/Globus/Data_Transfer_Between_Personal_Endpoints.md index a7a9f611c..1a6c69b88 100644 --- a/docs/Data_Transfer/Globus/Data_Transfer_Between_Personal_Endpoints.md +++ b/docs/Data_Transfer/Globus/Data_Transfer_Between_Personal_Endpoints.md @@ -1,8 +1,7 @@ --- created_at: '2021-08-27T03:18:13Z' -tags: - - globus - - file transfer +tags: + - file_transfer title: Data Transfer Between Two Personal Computers --- diff --git a/docs/Data_Transfer/Globus/Data_Transfer_to_Freezer.md b/docs/Data_Transfer/Globus/Data_Transfer_to_Freezer.md index 9e7a44ec3..897e5c9fb 100644 --- a/docs/Data_Transfer/Globus/Data_Transfer_to_Freezer.md +++ b/docs/Data_Transfer/Globus/Data_Transfer_to_Freezer.md @@ -1,8 +1,7 @@ --- -tags: - - globus - - freezer - - file transfer +tags: + - file_transfer + - storage search: exclude: true --- diff --git a/docs/Data_Transfer/Globus/Data_Transfer_using_Globus.md b/docs/Data_Transfer/Globus/Data_Transfer_using_Globus.md index fdbb3b5c4..39fe8161d 100644 --- a/docs/Data_Transfer/Globus/Data_Transfer_using_Globus.md +++ b/docs/Data_Transfer/Globus/Data_Transfer_using_Globus.md @@ -1,8 +1,7 @@ --- created_at: '2021-08-27T03:18:13Z' -tags: - - globus - - file transfer +tags: + - file_transfer --- Globus is useful for transferring files between Mahuika and your computer or server and can make it easy to transfer files due to its GUI web-based interface, as well as being able to resume transfers even if disrupted. diff --git a/docs/Data_Transfer/Globus/First_Time_Setup.md b/docs/Data_Transfer/Globus/First_Time_Setup.md index 800e04d43..140cdb5e9 100644 --- a/docs/Data_Transfer/Globus/First_Time_Setup.md +++ b/docs/Data_Transfer/Globus/First_Time_Setup.md @@ -1,7 +1,7 @@ --- created_at: '2019-02-27T21:04:11Z' -tags: - - globus +tags: + - file_transfer title: First Time Setup --- diff --git a/docs/Data_Transfer/Globus/Globus_CLI.md b/docs/Data_Transfer/Globus/Globus_CLI.md index e15d50337..321d73af4 100644 --- a/docs/Data_Transfer/Globus/Globus_CLI.md +++ b/docs/Data_Transfer/Globus/Globus_CLI.md @@ -1,8 +1,7 @@ --- created_at: '2025-12-23T07:00:00Z' -tags: - - globus - - file transfer +tags: + - file_transfer title: Globus CLI --- diff --git a/docs/Data_Transfer/Globus/Globus_Overview.md b/docs/Data_Transfer/Globus/Globus_Overview.md index 9dbab578b..639fd722b 100644 --- a/docs/Data_Transfer/Globus/Globus_Overview.md +++ b/docs/Data_Transfer/Globus/Globus_Overview.md @@ -1,8 +1,7 @@ --- created_at: '2021-08-27T03:18:13Z' -tags: - - globus - - file transfer +tags: + - file_transfer --- !!! note diff --git a/docs/Data_Transfer/Globus/Share_Collections.md b/docs/Data_Transfer/Globus/Share_Collections.md index 96f195c5a..07943748b 100644 --- a/docs/Data_Transfer/Globus/Share_Collections.md +++ b/docs/Data_Transfer/Globus/Share_Collections.md @@ -1,7 +1,7 @@ --- created_at: '2021-08-27T03:18:13Z' -tags: - - globus +tags: + - file_transfer title: Share Collections --- diff --git a/docs/Data_Transfer/Globus/Signing_Up_To_Globus_Subscription.md b/docs/Data_Transfer/Globus/Signing_Up_To_Globus_Subscription.md index 613fea03a..42f79f785 100644 --- a/docs/Data_Transfer/Globus/Signing_Up_To_Globus_Subscription.md +++ b/docs/Data_Transfer/Globus/Signing_Up_To_Globus_Subscription.md @@ -1,8 +1,7 @@ --- created_at: '2021-08-27T03:18:13Z' -tags: - - globus - - globus subscription +tags: + - file_transfer title: Signing up to a Free Globus Subscription --- diff --git a/docs/Data_Transfer/Globus/Syncing_files_with_globus_automate.md b/docs/Data_Transfer/Globus/Syncing_files_with_globus_automate.md index dd9862b7d..63e9d0cf8 100644 --- a/docs/Data_Transfer/Globus/Syncing_files_with_globus_automate.md +++ b/docs/Data_Transfer/Globus/Syncing_files_with_globus_automate.md @@ -1,8 +1,7 @@ --- created_at: '2023-01-12T20:45:15Z' -tags: - - globus - - file transfer +tags: + - file_transfer title: Sync'ing with globus-automate --- diff --git a/docs/Data_Transfer/RClone.md b/docs/Data_Transfer/RClone.md index 75b56c205..965f77852 100644 --- a/docs/Data_Transfer/RClone.md +++ b/docs/Data_Transfer/RClone.md @@ -1,6 +1,8 @@ --- created_at: 2026-01-05 description: How to transfer data on the REANNZ HPC using RClone. +tags: +- file_transfer --- Rclone is available for those that need to transfer data from cloud diff --git a/docs/Data_Transfer/Rsync.md b/docs/Data_Transfer/Rsync.md index 3ff1db66e..d93273946 100644 --- a/docs/Data_Transfer/Rsync.md +++ b/docs/Data_Transfer/Rsync.md @@ -1,6 +1,8 @@ --- created_at: 2026-01-05 description: How to transfer data on the REANNZ HPC using RSync. +tags: +- file_transfer --- !!! prerequisite diff --git a/docs/Data_Transfer/SCP.md b/docs/Data_Transfer/SCP.md index 3109bac3c..c99f855c6 100644 --- a/docs/Data_Transfer/SCP.md +++ b/docs/Data_Transfer/SCP.md @@ -2,6 +2,9 @@ created_at: 2026-01-05 title: SCP (Secure Copy) description: How to transfer data on the REANNZ HPC using SCP. +tags: +- file_transfer +- access --- !!! prerequisite diff --git a/docs/Data_Transfer/VSCode.md b/docs/Data_Transfer/VSCode.md index 5c4292160..4008b1cbc 100644 --- a/docs/Data_Transfer/VSCode.md +++ b/docs/Data_Transfer/VSCode.md @@ -2,7 +2,7 @@ created_at: 2026-01-05 description: How to transfer data on the REANNZ HPC using VSCode. tags: - - vscode + - ide --- !!! prerequisite diff --git a/docs/Getting_Started/Accessing_the_HPCs/Connecting_to_the_Cluster.md b/docs/Getting_Started/Accessing_the_HPCs/Connecting_to_the_Cluster.md index 6bb0565c7..1a63af169 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/Connecting_to_the_Cluster.md +++ b/docs/Getting_Started/Accessing_the_HPCs/Connecting_to_the_Cluster.md @@ -1,10 +1,8 @@ --- created_at: '2019-06-25T22:40:46Z' tags: -- terminal -- mobaxterm -- gitbash -- login +- access +- version_control --- !!! prerequisite diff --git a/docs/Getting_Started/Accessing_the_HPCs/First_Time_Login.md b/docs/Getting_Started/Accessing_the_HPCs/First_Time_Login.md index d94e799ca..938ef2831 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/First_Time_Login.md +++ b/docs/Getting_Started/Accessing_the_HPCs/First_Time_Login.md @@ -1,13 +1,9 @@ --- created_at: '2018-05-18T03:56:37Z' tags: -- MFA - access -- mfa -- token -- ondemand -- login -- mynesi +- interactive +- account --- !!! prerequisite diff --git a/docs/Getting_Started/Accessing_the_HPCs/Git_Bash_Windows.md b/docs/Getting_Started/Accessing_the_HPCs/Git_Bash_Windows.md index 26b67f8d3..ab9a6d2d0 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/Git_Bash_Windows.md +++ b/docs/Getting_Started/Accessing_the_HPCs/Git_Bash_Windows.md @@ -2,9 +2,8 @@ created_at: '2019-05-03T04:15:24Z' description: How to set up cluster access using 'git bash' tags: - - git - - bash - - ssh + - version_control + - access title: Git Bash (Windows) --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/Login_Troubleshooting.md b/docs/Getting_Started/Accessing_the_HPCs/Login_Troubleshooting.md index 15b52c1f3..682207d2b 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/Login_Troubleshooting.md +++ b/docs/Getting_Started/Accessing_the_HPCs/Login_Troubleshooting.md @@ -1,7 +1,7 @@ --- created_at: '2018-11-16T01:13:47Z' tags: -- login +- access description: Troubleshooting instructions for logging in to the REANNZ cluster --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/MobaXterm_Setup_Windows.md b/docs/Getting_Started/Accessing_the_HPCs/MobaXterm_Setup_Windows.md index 79598cedd..dd55e33b2 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/MobaXterm_Setup_Windows.md +++ b/docs/Getting_Started/Accessing_the_HPCs/MobaXterm_Setup_Windows.md @@ -1,8 +1,7 @@ --- created_at: '2018-11-30T00:32:25Z' -tags: - - ssh - - windows +tags: + - access title: MobaXterm Setup (Windows) description: How to set up cluster access using MobaXterm --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/Standard_Terminal_Setup.md b/docs/Getting_Started/Accessing_the_HPCs/Standard_Terminal_Setup.md index c0bfbe947..1e0d23adf 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/Standard_Terminal_Setup.md +++ b/docs/Getting_Started/Accessing_the_HPCs/Standard_Terminal_Setup.md @@ -1,8 +1,8 @@ --- created_at: '2018-11-30T00:34:14Z' tags: -- ssh -- howto +- access +- tutorial description: How to setup your ssh config file in order to connect to the HPC cluster. --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/VSCode.md b/docs/Getting_Started/Accessing_the_HPCs/VSCode.md index 391910eb4..a8ba7e6f4 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/VSCode.md +++ b/docs/Getting_Started/Accessing_the_HPCs/VSCode.md @@ -1,9 +1,8 @@ --- created_at: 2024-08-05 description: How to set up Visual Studio Code to access the Mahuika cluster -tags: +tags: - ide - - vscode - access --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/WinSCP-PuTTY_Setup_Windows.md b/docs/Getting_Started/Accessing_the_HPCs/WinSCP-PuTTY_Setup_Windows.md index 897cc901e..b4dcbf846 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/WinSCP-PuTTY_Setup_Windows.md +++ b/docs/Getting_Started/Accessing_the_HPCs/WinSCP-PuTTY_Setup_Windows.md @@ -1,9 +1,8 @@ --- created_at: '2018-11-26T03:03:23Z' -tags: - - windows - - winscp - - putty +tags: + - access + - file_transfer title: WinSCP/PuTTY Setup (Windows) --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/Windows_Subsystem_for_Linux_WSL.md b/docs/Getting_Started/Accessing_the_HPCs/Windows_Subsystem_for_Linux_WSL.md index a33e619c9..cc53a9a24 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/Windows_Subsystem_for_Linux_WSL.md +++ b/docs/Getting_Started/Accessing_the_HPCs/Windows_Subsystem_for_Linux_WSL.md @@ -1,10 +1,8 @@ --- created_at: '2019-07-30T00:31:40Z' -tags: - - wsl - - windows - - terminal - - vscode +tags: + - access + - ide title: Windows Subsystem for Linux (WSL) description: Enabling WSL allows utilising Linux tools on Windows. --- diff --git a/docs/Getting_Started/Accessing_the_HPCs/X11.md b/docs/Getting_Started/Accessing_the_HPCs/X11.md index 863ef3b9a..814d62395 100644 --- a/docs/Getting_Started/Accessing_the_HPCs/X11.md +++ b/docs/Getting_Started/Accessing_the_HPCs/X11.md @@ -1,10 +1,9 @@ --- created_at: '2019-07-30T01:58:26Z' tags: - - x11 + - access - visualisation - - mobaxterm - - tmux + - multiplexer --- !!! prerequisite diff --git a/docs/Getting_Started/Allocations/Allocations_and_Extensions.md b/docs/Getting_Started/Allocations/Allocations_and_Extensions.md index 93346904b..705e4160e 100644 --- a/docs/Getting_Started/Allocations/Allocations_and_Extensions.md +++ b/docs/Getting_Started/Allocations/Allocations_and_Extensions.md @@ -1,8 +1,7 @@ --- created_at: '2018-05-18T02:34:03Z' -tags: -- projects -- allocations +tags: +- account title: Allocations & Extensions --- diff --git a/docs/Getting_Started/Allocations/Quarterly_allocation_periods.md b/docs/Getting_Started/Allocations/Quarterly_allocation_periods.md index 63f9b35b0..acb496463 100644 --- a/docs/Getting_Started/Allocations/Quarterly_allocation_periods.md +++ b/docs/Getting_Started/Allocations/Quarterly_allocation_periods.md @@ -1,7 +1,7 @@ --- created_at: '2021-09-14T03:20:56Z' -tags: -- allocations +tags: +- account title: Quarterly Allocation Periods --- diff --git a/docs/Getting_Started/Allocations/What_is_an_allocation.md b/docs/Getting_Started/Allocations/What_is_an_allocation.md index 75498467d..34a9efb71 100644 --- a/docs/Getting_Started/Allocations/What_is_an_allocation.md +++ b/docs/Getting_Started/Allocations/What_is_an_allocation.md @@ -1,8 +1,7 @@ --- created_at: '2020-02-25T02:35:13Z' -tags: - - Allocations - - Compute +tags: + - account title: What is an Allocation? --- diff --git a/docs/Getting_Started/Cheat_Sheets/Bash-Reference_Sheet.md b/docs/Getting_Started/Cheat_Sheets/Bash-Reference_Sheet.md index 15b981789..772fb05d7 100644 --- a/docs/Getting_Started/Cheat_Sheets/Bash-Reference_Sheet.md +++ b/docs/Getting_Started/Cheat_Sheets/Bash-Reference_Sheet.md @@ -1,6 +1,8 @@ --- created_at: '2020-02-25T02:45:24Z' -tags: [] +tags: +- tutorial +- access title: 'Bash: Reference Sheet' vote_count: 2 vote_sum: 2 diff --git a/docs/Getting_Started/Cheat_Sheets/Git-Reference_Sheet.md b/docs/Getting_Started/Cheat_Sheets/Git-Reference_Sheet.md index ad119d95b..1350f0dbc 100644 --- a/docs/Getting_Started/Cheat_Sheets/Git-Reference_Sheet.md +++ b/docs/Getting_Started/Cheat_Sheets/Git-Reference_Sheet.md @@ -1,9 +1,7 @@ --- created_at: '2020-05-07T02:51:35Z' tags: -- git -- version control -- repository +- version_control title: 'Git: Reference Sheet' vote_count: 13 vote_sum: 13 diff --git a/docs/Getting_Started/Cheat_Sheets/Git-provider-setup.md b/docs/Getting_Started/Cheat_Sheets/Git-provider-setup.md index 271a5a266..d7dfc8964 100644 --- a/docs/Getting_Started/Cheat_Sheets/Git-provider-setup.md +++ b/docs/Getting_Started/Cheat_Sheets/Git-provider-setup.md @@ -1,12 +1,7 @@ --- created_at: '2026-02-12' tags: -- gitlab -- github -- bitbucket -- gitea -- version control -- repository +- version_control title: 'Git Hosting Platform Setup' --- diff --git a/docs/Getting_Started/Cheat_Sheets/Slurm-Reference_Sheet.md b/docs/Getting_Started/Cheat_Sheets/Slurm-Reference_Sheet.md index 23c915d75..f237dd206 100644 --- a/docs/Getting_Started/Cheat_Sheets/Slurm-Reference_Sheet.md +++ b/docs/Getting_Started/Cheat_Sheets/Slurm-Reference_Sheet.md @@ -1,8 +1,8 @@ --- created_at: '2019-01-10T02:22:09Z' -tags: - - Slurm - - cheat sheet +tags: + - slurm + - tutorial title: 'Slurm: Reference Sheet' description: Quick list of the most commonly used Slurm commands, flags, and environment variables. --- diff --git a/docs/Getting_Started/Cheat_Sheets/tmux-Reference_sheet.md b/docs/Getting_Started/Cheat_Sheets/tmux-Reference_sheet.md index 938db6b83..7fed6fdfe 100644 --- a/docs/Getting_Started/Cheat_Sheets/tmux-Reference_sheet.md +++ b/docs/Getting_Started/Cheat_Sheets/tmux-Reference_sheet.md @@ -1,9 +1,6 @@ --- created_at: '2022-03-24T22:11:13Z' -tags: - - tmux - - screen - - zellij +tags: - multiplexer title: 'tmux: Reference sheet' vote_count: 1 diff --git a/docs/Getting_Started/Creating_an_Account.md b/docs/Getting_Started/Creating_an_Account.md index b08ed26af..c7083947b 100644 --- a/docs/Getting_Started/Creating_an_Account.md +++ b/docs/Getting_Started/Creating_an_Account.md @@ -1,8 +1,8 @@ --- created_at: '2018-04-18T23:56:10Z' tags: -- onboarding -- mynesi +- tutorial +- account description: How to create a REANNZ HPC account. --- diff --git a/docs/Getting_Started/FAQs/Can_I_change_my_time_zone_to_New_Zealand_time.md b/docs/Getting_Started/FAQs/Can_I_change_my_time_zone_to_New_Zealand_time.md index 7503f49f2..673230f3d 100644 --- a/docs/Getting_Started/FAQs/Can_I_change_my_time_zone_to_New_Zealand_time.md +++ b/docs/Getting_Started/FAQs/Can_I_change_my_time_zone_to_New_Zealand_time.md @@ -1,6 +1,8 @@ --- created_at: '2018-09-20T23:52:07Z' -tags: [] +tags: +- troubleshooting +- access description: Information on the system timezone and how to make changes --- diff --git a/docs/Getting_Started/FAQs/Common_questions_about_the_platform_refresh.md b/docs/Getting_Started/FAQs/Common_questions_about_the_platform_refresh.md index b433e87e9..4b5cbfc86 100644 --- a/docs/Getting_Started/FAQs/Common_questions_about_the_platform_refresh.md +++ b/docs/Getting_Started/FAQs/Common_questions_about_the_platform_refresh.md @@ -1,9 +1,9 @@ --- description: Common questions researchers have about REANNZ's platform refresh. status: -tags: - - refresh - - hpc3 +tags: + - announcement + - release_notes search: boost: 2 --- diff --git a/docs/Getting_Started/FAQs/Converting_from_Windows_style_to_UNIX_style_line_endings.md b/docs/Getting_Started/FAQs/Converting_from_Windows_style_to_UNIX_style_line_endings.md index 1605dfd3a..2ce937e08 100644 --- a/docs/Getting_Started/FAQs/Converting_from_Windows_style_to_UNIX_style_line_endings.md +++ b/docs/Getting_Started/FAQs/Converting_from_Windows_style_to_UNIX_style_line_endings.md @@ -1,6 +1,8 @@ --- created_at: '2016-03-14T01:52:06Z' -tags: [] +tags: +- troubleshooting +- access description: Instructions for converting from Windows-style to UNIX-style line endings --- diff --git a/docs/Getting_Started/FAQs/How_busy_is_the_cluster.md b/docs/Getting_Started/FAQs/How_busy_is_the_cluster.md index a03bc0433..65ecbd2f1 100644 --- a/docs/Getting_Started/FAQs/How_busy_is_the_cluster.md +++ b/docs/Getting_Started/FAQs/How_busy_is_the_cluster.md @@ -1,8 +1,7 @@ --- created_at: '2019-09-22T20:20:07Z' tags: - - sinfo - - busy + - troubleshooting title: How busy is the cluster? --- diff --git a/docs/Getting_Started/FAQs/How_can_I_give_read_only_team_members_access_to_my_files.md b/docs/Getting_Started/FAQs/How_can_I_give_read_only_team_members_access_to_my_files.md index 78c3a9a9b..0ec6ff264 100644 --- a/docs/Getting_Started/FAQs/How_can_I_give_read_only_team_members_access_to_my_files.md +++ b/docs/Getting_Started/FAQs/How_can_I_give_read_only_team_members_access_to_my_files.md @@ -1,6 +1,8 @@ --- created_at: '2021-06-04T00:42:20Z' -tags: [] +tags: +- storage +- account description: Instructions for giving read-only team members access to files --- diff --git a/docs/Getting_Started/FAQs/How_can_I_let_my_fellow_project_team_members_read_or_write_my_files.md b/docs/Getting_Started/FAQs/How_can_I_let_my_fellow_project_team_members_read_or_write_my_files.md index cc55caa6c..5e8353826 100644 --- a/docs/Getting_Started/FAQs/How_can_I_let_my_fellow_project_team_members_read_or_write_my_files.md +++ b/docs/Getting_Started/FAQs/How_can_I_let_my_fellow_project_team_members_read_or_write_my_files.md @@ -1,6 +1,8 @@ --- created_at: '2019-11-07T04:11:03Z' -tags: [] +tags: +- storage +- account description: Instructions for giving project team members read or write access to files? --- diff --git a/docs/Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md b/docs/Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md index a02a41041..76ce5f3d1 100644 --- a/docs/Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md +++ b/docs/Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md @@ -2,9 +2,8 @@ created_at: '2020-05-11T23:29:39Z' tags: - visualisation -- image -- x11 -- view +- containers +- access description: Instructions for viewing images generated on the cluster --- diff --git a/docs/Getting_Started/FAQs/How_do_I_find_out_the_size_of_a_directory.md b/docs/Getting_Started/FAQs/How_do_I_find_out_the_size_of_a_directory.md index f91d8bf6b..68340e494 100644 --- a/docs/Getting_Started/FAQs/How_do_I_find_out_the_size_of_a_directory.md +++ b/docs/Getting_Started/FAQs/How_do_I_find_out_the_size_of_a_directory.md @@ -1,6 +1,7 @@ --- created_at: '2022-02-09T01:40:51Z' -tags: [] +tags: +- storage description: Instructions for finding the size of a directory? --- diff --git a/docs/Getting_Started/FAQs/How_do_I_fix_my_locale_and_language_settings.md b/docs/Getting_Started/FAQs/How_do_I_fix_my_locale_and_language_settings.md index 35afa28a6..e1e5339ed 100644 --- a/docs/Getting_Started/FAQs/How_do_I_fix_my_locale_and_language_settings.md +++ b/docs/Getting_Started/FAQs/How_do_I_fix_my_locale_and_language_settings.md @@ -1,6 +1,8 @@ --- created_at: '2022-02-15T04:10:09Z' -tags: [] +tags: +- troubleshooting +- access description: Instructions for changing locale and language settings --- diff --git a/docs/Getting_Started/FAQs/How_do_I_replace_my_Additional_Authentication_Credentials.md b/docs/Getting_Started/FAQs/How_do_I_replace_my_Additional_Authentication_Credentials.md index b515f913c..a834248a5 100644 --- a/docs/Getting_Started/FAQs/How_do_I_replace_my_Additional_Authentication_Credentials.md +++ b/docs/Getting_Started/FAQs/How_do_I_replace_my_Additional_Authentication_Credentials.md @@ -1,7 +1,6 @@ --- created_at: '2019-01-07T20:34:07Z' tags: -- MFA - access - account description: How to reset your authentication credendials for MFA. diff --git a/docs/Getting_Started/FAQs/How_do_I_request_memory.md b/docs/Getting_Started/FAQs/How_do_I_request_memory.md index 5806415f6..1d177c121 100644 --- a/docs/Getting_Started/FAQs/How_do_I_request_memory.md +++ b/docs/Getting_Started/FAQs/How_do_I_request_memory.md @@ -1,6 +1,8 @@ --- created_at: '2019-08-14T05:49:00Z' -tags: [] +tags: +- slurm +- troubleshooting description: Instructions for requesting memory --- diff --git a/docs/Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md b/docs/Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md index b69216bf5..6e4cffe6d 100644 --- a/docs/Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md +++ b/docs/Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md @@ -1,6 +1,9 @@ --- created_at: '2023-09-17T23:51:43Z' -tags: [] +tags: +- slurm +- python +- interactive description: Instructions for running a Python notebook through Slurm --- diff --git a/docs/Getting_Started/FAQs/Ive_run_out_of_storage_space.md b/docs/Getting_Started/FAQs/Ive_run_out_of_storage_space.md index 73e47cd08..b3ad253b0 100644 --- a/docs/Getting_Started/FAQs/Ive_run_out_of_storage_space.md +++ b/docs/Getting_Started/FAQs/Ive_run_out_of_storage_space.md @@ -1,7 +1,7 @@ --- created_at: '2019-08-26T00:02:24Z' tags: -- disk quota exceeded +- troubleshooting title: I've run out of storage space --- diff --git a/docs/Getting_Started/FAQs/Mahuika_HPC3_Differences.md b/docs/Getting_Started/FAQs/Mahuika_HPC3_Differences.md index 6cf202498..bb9fc30ca 100644 --- a/docs/Getting_Started/FAQs/Mahuika_HPC3_Differences.md +++ b/docs/Getting_Started/FAQs/Mahuika_HPC3_Differences.md @@ -2,9 +2,9 @@ created_at: 2025-05-07 description: This article presents an overview comparison of the differences between the NeSI Mahuika cluster and the new cluster. status: -tags: - - hpc3 - - refresh +tags: + - release_notes + - announcement status: deprecated --- diff --git a/docs/Getting_Started/FAQs/What_Is_A_Trusted_Device.md b/docs/Getting_Started/FAQs/What_Is_A_Trusted_Device.md index 6ad6e636e..306a32890 100644 --- a/docs/Getting_Started/FAQs/What_Is_A_Trusted_Device.md +++ b/docs/Getting_Started/FAQs/What_Is_A_Trusted_Device.md @@ -1,8 +1,7 @@ --- created_at: '2018-05-28T03:40:42Z' description: Explanation of trusted devices -tags: - - MFA +tags: - access --- diff --git a/docs/Getting_Started/FAQs/What_are_my-bashrc_and-bash_profile_for.md b/docs/Getting_Started/FAQs/What_are_my-bashrc_and-bash_profile_for.md index 72a7386bb..4181690c1 100644 --- a/docs/Getting_Started/FAQs/What_are_my-bashrc_and-bash_profile_for.md +++ b/docs/Getting_Started/FAQs/What_are_my-bashrc_and-bash_profile_for.md @@ -1,6 +1,7 @@ --- created_at: '2019-10-03T04:08:49Z' -tags: [] +tags: +- access description: Explanation of .bashrc & .bash_profile files --- diff --git a/docs/Getting_Started/FAQs/What_does_oom_kill_mean.md b/docs/Getting_Started/FAQs/What_does_oom_kill_mean.md index 5db3b8b23..0d3b99e12 100644 --- a/docs/Getting_Started/FAQs/What_does_oom_kill_mean.md +++ b/docs/Getting_Started/FAQs/What_does_oom_kill_mean.md @@ -1,7 +1,7 @@ --- created_at: '2018-10-25T02:22:02Z' tags: -- faq +- troubleshooting description: Explanation of the "oom-kill" error --- diff --git a/docs/Getting_Started/FAQs/What_is_Multiple_Factor_Authentication_MFA.md b/docs/Getting_Started/FAQs/What_is_Multiple_Factor_Authentication_MFA.md index 75dfe5412..fab2ad64f 100644 --- a/docs/Getting_Started/FAQs/What_is_Multiple_Factor_Authentication_MFA.md +++ b/docs/Getting_Started/FAQs/What_is_Multiple_Factor_Authentication_MFA.md @@ -1,8 +1,7 @@ --- created_at: '2018-05-28T03:40:42Z' description: Explanation of Multiple Factor Authentication (MFA) -tags: - - MFA +tags: - access --- diff --git a/docs/Getting_Started/FAQs/What_is_a_core_file.md b/docs/Getting_Started/FAQs/What_is_a_core_file.md index 0a2658e1b..542e89de1 100644 --- a/docs/Getting_Started/FAQs/What_is_a_core_file.md +++ b/docs/Getting_Started/FAQs/What_is_a_core_file.md @@ -1,7 +1,6 @@ --- created_at: '2020-06-25T01:10:40Z' tags: -- corefile - troubleshooting description: Explanation of .core files --- diff --git a/docs/Getting_Started/FAQs/Why_am_I_seeing_Account_is_not_ready.md b/docs/Getting_Started/FAQs/Why_am_I_seeing_Account_is_not_ready.md index 03930af77..40be21e14 100644 --- a/docs/Getting_Started/FAQs/Why_am_I_seeing_Account_is_not_ready.md +++ b/docs/Getting_Started/FAQs/Why_am_I_seeing_Account_is_not_ready.md @@ -3,7 +3,6 @@ created_at: '2018-11-05T21:24:29Z' tags: - access - account -- mynesi description: Instructions for Account is not ready error --- diff --git a/docs/Getting_Started/FAQs/Why_does_my_program_crash.md b/docs/Getting_Started/FAQs/Why_does_my_program_crash.md index 8fe5ba5aa..5a66c1c3e 100644 --- a/docs/Getting_Started/FAQs/Why_does_my_program_crash.md +++ b/docs/Getting_Started/FAQs/Why_does_my_program_crash.md @@ -1,6 +1,7 @@ --- created_at: '2019-05-05T23:39:05Z' -tags: [] +tags: +- troubleshooting description: Potential causes of program crashes --- diff --git a/docs/Getting_Started/Getting_Help.md b/docs/Getting_Started/Getting_Help.md index 7ca8ab93b..c62058419 100644 --- a/docs/Getting_Started/Getting_Help.md +++ b/docs/Getting_Started/Getting_Help.md @@ -1,6 +1,8 @@ --- created_at: 2026-03-18 description: How to seek further help with the HPC platform +tags: +- troubleshooting --- ## Support request diff --git a/docs/Getting_Started/Job_efficiency_review.md b/docs/Getting_Started/Job_efficiency_review.md index 6437e32fe..54be4e5ed 100644 --- a/docs/Getting_Started/Job_efficiency_review.md +++ b/docs/Getting_Started/Job_efficiency_review.md @@ -1,6 +1,9 @@ --- created_at: '2020-12-17T20:12:46Z' -tags: [] +tags: +- slurm +- profiling +- account vote_count: 0 vote_sum: 0 zendesk_article_id: 360002327275 diff --git a/docs/Getting_Started/Making_a_Helpful_Support_Request.md b/docs/Getting_Started/Making_a_Helpful_Support_Request.md index 04ad3e30f..cb347b89d 100644 --- a/docs/Getting_Started/Making_a_Helpful_Support_Request.md +++ b/docs/Getting_Started/Making_a_Helpful_Support_Request.md @@ -1,6 +1,7 @@ --- created_at: '2024-03-05T23:28:34Z' -tags: [] +tags: +- troubleshooting --- When you ask the support team for help, there are a few things we will diff --git a/docs/Getting_Started/Projects/Adding_Members_to_your_Project.md b/docs/Getting_Started/Projects/Adding_Members_to_your_Project.md index 90b287e66..e33182dd2 100644 --- a/docs/Getting_Started/Projects/Adding_Members_to_your_Project.md +++ b/docs/Getting_Started/Projects/Adding_Members_to_your_Project.md @@ -1,10 +1,8 @@ --- created_at: '2024-05-16T01:11:34Z' tags: -- info -- project -- request_membership -- mynesi +- announcement +- account description: How to add a new member to your project. --- diff --git a/docs/Getting_Started/Projects/Applying_for_a_New_Project.md b/docs/Getting_Started/Projects/Applying_for_a_New_Project.md index bc1f61267..b16ba1879 100644 --- a/docs/Getting_Started/Projects/Applying_for_a_New_Project.md +++ b/docs/Getting_Started/Projects/Applying_for_a_New_Project.md @@ -1,9 +1,8 @@ --- created_at: '2018-05-01T03:39:22Z' tags: -- info -- project -- mynesi +- announcement +- account --- !!! prerequisite diff --git a/docs/Getting_Started/Projects/Applying_to_Join_a_Project.md b/docs/Getting_Started/Projects/Applying_to_Join_a_Project.md index 950008182..c5d440e3d 100644 --- a/docs/Getting_Started/Projects/Applying_to_Join_a_Project.md +++ b/docs/Getting_Started/Projects/Applying_to_Join_a_Project.md @@ -1,10 +1,8 @@ --- created_at: '2019-01-11T01:11:34Z' tags: -- info -- project -- request_membership -- mynesi +- announcement +- account --- !!! prerequisite diff --git a/docs/Getting_Started/System_status.md b/docs/Getting_Started/System_status.md index 5daa05524..49841617a 100644 --- a/docs/Getting_Started/System_status.md +++ b/docs/Getting_Started/System_status.md @@ -1,7 +1,7 @@ --- created_at: '2019-02-07T20:31:36Z' tags: -- help +- troubleshooting --- ## REANNZ system status related notifications diff --git a/docs/Getting_Started/Weekly_Online_Office_Hours.md b/docs/Getting_Started/Weekly_Online_Office_Hours.md index ab0a9fc89..267fff1c3 100644 --- a/docs/Getting_Started/Weekly_Online_Office_Hours.md +++ b/docs/Getting_Started/Weekly_Online_Office_Hours.md @@ -1,6 +1,6 @@ --- created_at: '2022-05-18T03:38:21Z' -tags: [intro, hpc] +tags: [intro] vote_count: 0 vote_sum: 0 zendesk_article_id: 4830713922063 diff --git a/docs/Getting_Started/my-nesi-org-nz/Logging_in_to_my-nesi-org-nz.md b/docs/Getting_Started/my-nesi-org-nz/Logging_in_to_my-nesi-org-nz.md index 4ad73e4f4..9ea907a79 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Logging_in_to_my-nesi-org-nz.md +++ b/docs/Getting_Started/my-nesi-org-nz/Logging_in_to_my-nesi-org-nz.md @@ -1,6 +1,8 @@ --- created_at: '2021-03-01T21:23:33Z' -tags: [] +tags: +- access +- account title: Logging in to my.nesi.org.nz vote_count: 2 vote_sum: -2 diff --git a/docs/Getting_Started/my-nesi-org-nz/Managing_notification_preferences.md b/docs/Getting_Started/my-nesi-org-nz/Managing_notification_preferences.md index e7284d851..7d5a3e915 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Managing_notification_preferences.md +++ b/docs/Getting_Started/my-nesi-org-nz/Managing_notification_preferences.md @@ -1,6 +1,7 @@ --- created_at: '2022-03-24T20:50:10Z' -tags: [] +tags: +- account description: How to manage your notification preferences. --- diff --git a/docs/Getting_Started/my-nesi-org-nz/Navigating_the_my-nesi-org-nz_web_interface.md b/docs/Getting_Started/my-nesi-org-nz/Navigating_the_my-nesi-org-nz_web_interface.md index f73d1d9f4..5dc622b74 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Navigating_the_my-nesi-org-nz_web_interface.md +++ b/docs/Getting_Started/my-nesi-org-nz/Navigating_the_my-nesi-org-nz_web_interface.md @@ -1,6 +1,7 @@ --- created_at: '2021-03-03T21:29:16Z' -tags: [] +tags: +- account title: Navigating the my.nesi.org.nz web interface vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Project_Request_Form.md b/docs/Getting_Started/my-nesi-org-nz/Project_Request_Form.md index 0c166e2d6..a6d86f284 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Project_Request_Form.md +++ b/docs/Getting_Started/my-nesi-org-nz/Project_Request_Form.md @@ -1,6 +1,7 @@ --- created_at: '2021-03-11T21:59:07Z' -tags: [] +tags: +- account --- See [Applying for a project](../Projects/Applying_for_a_New_Project.md)  diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-1.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-1.md index cdfcd8452..48b5fdaec 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-1.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-1.md @@ -1,7 +1,7 @@ --- created_at: '2021-03-02T00:48:08Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.0.1 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-3.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-3.md index 14106bdc5..7035ddc54 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-3.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-3.md @@ -1,7 +1,7 @@ --- created_at: '2021-06-10T23:35:38Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.0.3 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-1-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-1-0.md index b3b920f07..d57726375 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-1-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-1-0.md @@ -1,7 +1,7 @@ --- created_at: '2021-06-30T21:25:41Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.1.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-10-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-10-0.md index 3ae138cef..f76d5c353 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-10-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-10-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-06-14T04:34:29Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.10.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-11-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-11-0.md index e9fabba98..533d5000d 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-11-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-11-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-06-21T04:47:05Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.11.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-12-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-12-0.md index 97fe692db..e71a9d857 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-12-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-12-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-07-07T05:29:50Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.12.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-13-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-13-0.md index 4f379e58f..67caaa17c 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-13-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-13-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-11-24T02:18:21Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.13.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-14-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-14-0.md index 8b6bc873d..b09953b71 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-14-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-14-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-12-13T21:40:10Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.14.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-15-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-15-0.md index accd0fdb5..42dee0726 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-15-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-15-0.md @@ -1,7 +1,7 @@ --- created_at: '2023-04-19T05:05:05Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.15.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-16-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-16-0.md index 098b20e1e..70dbf9c59 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-16-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-16-0.md @@ -1,7 +1,7 @@ --- created_at: '2023-06-13T04:45:48Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.16.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-17-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-17-0.md index 003cb4685..b8674c4e5 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-17-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-17-0.md @@ -1,7 +1,7 @@ --- created_at: '2023-08-27T21:36:50Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.17.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-18-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-18-0.md index df742794a..69f328a31 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-18-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-18-0.md @@ -1,7 +1,7 @@ --- created_at: '2023-10-16T03:51:17Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.18.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-19-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-19-0.md index 9ccc99bf4..f07982d62 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-19-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-19-0.md @@ -1,7 +1,7 @@ --- created_at: '2023-11-20T03:23:08Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.19.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-2-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-2-0.md index 8f832741e..5735c874d 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-2-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-2-0.md @@ -1,7 +1,7 @@ --- created_at: '2021-07-21T05:29:16Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.2.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-20-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-20-0.md index 60fd99378..da4cfaaf7 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-20-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-20-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-02-26T19:55:24Z' tags: -- releasenote +- release_notes vote_count: 0 vote_sum: 0 zendesk_article_id: 9108460666383 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-21-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-21-0.md index ec2f8d713..3ef891284 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-21-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-21-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-03-20T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.21.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-22-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-22-0.md index 0b6bc40f5..e8d3473d8 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-22-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-22-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-04-30T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.22.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-23-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-23-0.md index b25bc49fb..42ec39ec3 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-23-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-23-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-05-20T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.23.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-24-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-24-0.md index 6ae7b495d..e8746b797 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-24-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-24-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-05-28T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.24.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-25-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-25-0.md index 8aad26df5..fc149be7c 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-25-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-25-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-06-21T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.25.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-26-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-26-0.md index 7d18b31f6..30c2c7f0c 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-26-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-26-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-07-08T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.26.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-27-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-27-0.md index 11a145da9..c8d37ad9f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-27-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-27-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-08-20T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.27.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-28-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-28-0.md index dcc1e38ea..d2ce5f6f7 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-28-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-28-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-08-27T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.28.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-29-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-29-0.md index 2134e70cd..901500f17 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-29-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-29-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-10-04T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.29.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-3-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-3-0.md index 8dcf094c3..00f152e1f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-3-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-3-0.md @@ -1,7 +1,7 @@ --- created_at: '2021-08-19T02:16:06Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.3.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-30-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-30-0.md index eaf816ba5..6030e8fd3 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-30-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-30-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-11-11T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.30.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-31-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-31-0.md index e0aeb0bb1..01c0bf516 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-31-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-31-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-12-10T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.31.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-33-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-33-0.md index 8947bef3d..981d32586 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-33-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-33-0.md @@ -1,7 +1,7 @@ --- created_at: '2024-12-10T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.33.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-34-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-34-0.md index 4e695eaea..dd8cf1efa 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-34-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-34-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-04-11T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.34.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-35-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-35-0.md index d50b4a8a4..8efa30762 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-35-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-35-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-05-09T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.35.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-36-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-36-0.md index 47625f234..5ed0df79f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-36-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-36-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-05-09T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.36.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-37-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-37-0.md index d1efbfdb7..05d5c6c51 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-37-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-37-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-05-29T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.37.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-38-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-38-0.md index b79df1415..934192831 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-38-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-38-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-06-26T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.38.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-39-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-39-0.md index b506cbc94..b47f3413f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-39-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-39-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-07-24T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.39.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-4-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-4-0.md index 4a3cc379a..d310d0206 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-4-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-4-0.md @@ -1,7 +1,7 @@ --- created_at: '2021-09-14T02:36:11Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.4.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-40-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-40-0.md index 8f3f4b57c..a28c08d4c 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-40-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-40-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-08-18T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.40.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-41-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-41-0.md index de83c5222..a4af19d1b 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-41-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-41-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-08-25T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.41.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-42-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-42-0.md index 2e15d3eaa..2d28f147f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-42-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-42-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-09-25T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.42.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-43-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-43-0.md index 1b71db2b4..342ceafdc 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-43-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-43-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-10-28T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.43.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-44-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-44-0.md index 8e62f758a..95f705acd 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-44-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-44-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-10-30T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.44.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-45-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-45-0.md index 2fcb13c5b..63f333efd 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-45-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-45-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-12-04T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.45.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-46-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-46-0.md index 0934214cd..8dc8ce104 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-46-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-46-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-12-11T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.46.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-47-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-47-0.md index 8fc47f96c..1b5288a13 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-47-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-47-0.md @@ -1,7 +1,7 @@ --- created_at: '2025-12-15T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.47.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-48-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-48-0.md index 8a9d25097..410f0753f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-48-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-48-0.md @@ -1,7 +1,7 @@ --- created_at: '2026-01-27T19:53:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.48.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-49-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-49-0.md index 6efa0c3f4..7581e3f03 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-49-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-49-0.md @@ -1,7 +1,7 @@ --- created_at: '2026-01-25T09:00:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.49.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-5-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-5-0.md index 643685c6f..1f54fe6c9 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-5-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-5-0.md @@ -1,7 +1,7 @@ --- created_at: '2021-11-03T04:42:33Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.5.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-50-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-50-0.md index 4a0462f23..d5e5d8821 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-50-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-50-0.md @@ -1,7 +1,7 @@ --- created_at: '2026-03-25T09:00:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.50.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-51-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-51-0.md index 17c8e9808..f3df5dc66 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-51-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-51-0.md @@ -1,7 +1,7 @@ --- created_at: '2026-04-28T09:00:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.51.0 search: boost: 0.1 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-6-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-6-0.md index d2557b38f..070b5bd93 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-6-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-6-0.md @@ -1,7 +1,7 @@ --- created_at: '2021-12-14T04:36:24Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.6.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-7-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-7-0.md index cfadb2b0a..95c58f39b 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-7-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-7-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-03-21T20:49:37Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.7.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-8-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-8-0.md index 3a7ac227c..571e17216 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-8-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-8-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-04-12T05:07:17Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.8.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-9-0.md b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-9-0.md index c30bd6d62..ce178dd28 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-9-0.md +++ b/docs/Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-9-0.md @@ -1,7 +1,7 @@ --- created_at: '2022-05-18T05:05:17Z' tags: -- releasenote +- release_notes title: my.nesi.org.nz release notes v2.9.0 vote_count: 0 vote_sum: 0 diff --git a/docs/Getting_Started/my-nesi-org-nz/Requesting_to_renew_an_allocation_via_my-nesi-org-nz.md b/docs/Getting_Started/my-nesi-org-nz/Requesting_to_renew_an_allocation_via_my-nesi-org-nz.md index f201ca826..53442e507 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Requesting_to_renew_an_allocation_via_my-nesi-org-nz.md +++ b/docs/Getting_Started/my-nesi-org-nz/Requesting_to_renew_an_allocation_via_my-nesi-org-nz.md @@ -1,8 +1,7 @@ --- created_at: '2022-03-31T20:51:51Z' tags: -- mynesi -- allocation +- account description: How to request a Mahuika allocation renewal. --- diff --git a/docs/Getting_Started/my-nesi-org-nz/Tuakiri_Attribute_Validator.md b/docs/Getting_Started/my-nesi-org-nz/Tuakiri_Attribute_Validator.md index 170c06656..e91d41c7f 100644 --- a/docs/Getting_Started/my-nesi-org-nz/Tuakiri_Attribute_Validator.md +++ b/docs/Getting_Started/my-nesi-org-nz/Tuakiri_Attribute_Validator.md @@ -1,6 +1,8 @@ --- created_at: '2021-04-30T03:29:54Z' -tags: [] +tags: +- access +- account title: Tuakiri Attribute Validator vote_count: 0 vote_sum: 0 diff --git a/docs/Interactive_Computing/Jupyter_Interactive_Sessions.md b/docs/Interactive_Computing/Jupyter_Interactive_Sessions.md index 24c8d6d60..fc4f7667d 100644 --- a/docs/Interactive_Computing/Jupyter_Interactive_Sessions.md +++ b/docs/Interactive_Computing/Jupyter_Interactive_Sessions.md @@ -1,10 +1,7 @@ --- created_at: '2020-01-05T21:43:18Z' -tags: +tags: - interactive - - JupyterLab - - notebook - - ipython - python description: How to run an JupyterLab interactive session on the Mahuika cluster. --- diff --git a/docs/Interactive_Computing/Marimo_Interactive_Sessions.md b/docs/Interactive_Computing/Marimo_Interactive_Sessions.md index 8e5a75eb5..4f218eec3 100644 --- a/docs/Interactive_Computing/Marimo_Interactive_Sessions.md +++ b/docs/Interactive_Computing/Marimo_Interactive_Sessions.md @@ -1,10 +1,8 @@ --- created_at: '2020-01-05T21:43:18Z' -tags: +tags: - interactive - - Marimo - python - - notebook description: How to run a Marimo interactive session on the Mahuika cluster. --- diff --git a/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md b/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md index d859d4cd9..c7a2128be 100644 --- a/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md +++ b/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md @@ -1,10 +1,10 @@ --- created_at: 2025-01-24 description: How to set up your own custom kernels for use on Mahuika JupyterHub -tags: - - JupyterHub - - Python - - R +tags: + - interactive + - python + - r --- # Jupyter kernels - Manual management diff --git a/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md b/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md index 3b7d8b87e..20e1f4bac 100644 --- a/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md +++ b/docs/Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md @@ -1,10 +1,10 @@ --- title: Jupyter kernels - Tool-assisted management description: -tags: - - JupyterHub - - Python - - R +tags: + - interactive + - python + - r --- ## Introduction diff --git a/docs/Interactive_Computing/OnDemand/Apps/MATLAB.md b/docs/Interactive_Computing/OnDemand/Apps/MATLAB.md index 80430b4d1..825cfa645 100644 --- a/docs/Interactive_Computing/OnDemand/Apps/MATLAB.md +++ b/docs/Interactive_Computing/OnDemand/Apps/MATLAB.md @@ -1,6 +1,9 @@ --- created_at: 2025-08-05 description: The MATLAB app is currently being developed. +tags: +- interactive +- mathematics --- # MATLAB via OnDemand diff --git a/docs/Interactive_Computing/OnDemand/Apps/virtual_desktop.md b/docs/Interactive_Computing/OnDemand/Apps/virtual_desktop.md index 2477ab9bd..724f1badd 100644 --- a/docs/Interactive_Computing/OnDemand/Apps/virtual_desktop.md +++ b/docs/Interactive_Computing/OnDemand/Apps/virtual_desktop.md @@ -1,8 +1,7 @@ --- created_at: 2025-07-10 description: How to use an interactive desktop on Mahuika -tags: - - ood +tags: - interactive --- diff --git a/docs/Interactive_Computing/OnDemand/how_to_guide.md b/docs/Interactive_Computing/OnDemand/how_to_guide.md index d28cdd2c7..2981c314c 100644 --- a/docs/Interactive_Computing/OnDemand/how_to_guide.md +++ b/docs/Interactive_Computing/OnDemand/how_to_guide.md @@ -1,10 +1,7 @@ --- tags: - - jupyter - - lab - - notebook - - ondemand - - rstudio + - interactive + - r description: Getting Started With NeSI onDemand title: NeSI OnDemand how-to guide --- diff --git a/docs/Interactive_Computing/OnDemand/ood_troubleshooting.md b/docs/Interactive_Computing/OnDemand/ood_troubleshooting.md index c005d6a4b..72cc05ea6 100644 --- a/docs/Interactive_Computing/OnDemand/ood_troubleshooting.md +++ b/docs/Interactive_Computing/OnDemand/ood_troubleshooting.md @@ -2,8 +2,8 @@ created_at: 2025-08-18 description: How to fix common errors in OnDemand title: OnDemand Troubleshooting -tags: - - ondemand +tags: + - interactive - troubleshooting --- diff --git a/docs/Interactive_Computing/Pluto_Interactive_Sessions.md b/docs/Interactive_Computing/Pluto_Interactive_Sessions.md index c45d9009e..8f1511eb7 100644 --- a/docs/Interactive_Computing/Pluto_Interactive_Sessions.md +++ b/docs/Interactive_Computing/Pluto_Interactive_Sessions.md @@ -1,10 +1,8 @@ --- created_at: '2020-01-05T21:43:18Z' -tags: +tags: - interactive - - Pluto - - Julia - - notebook + - julia description: How to run a Pluto interactive session on the Mahuika cluster. --- diff --git a/docs/Interactive_Computing/Slurm_Interactive_Sessions.md b/docs/Interactive_Computing/Slurm_Interactive_Sessions.md index 4257262c0..35b10cff5 100644 --- a/docs/Interactive_Computing/Slurm_Interactive_Sessions.md +++ b/docs/Interactive_Computing/Slurm_Interactive_Sessions.md @@ -1,8 +1,8 @@ --- created_at: '2020-01-05T21:43:18Z' -tags: +tags: - interactive - - scheduling + - slurm description: How to run an interactive session on the REANNZ HPC cluster. --- diff --git a/docs/NEWPAGE.md b/docs/NEWPAGE.md index dd278dd1d..0d8062811 100644 --- a/docs/NEWPAGE.md +++ b/docs/NEWPAGE.md @@ -30,9 +30,10 @@ This page details how to create a new article or category in the documentation. ```yml --- - created: + created_at: description: "Will be used to generate page preview. Should not contain keywords not in the body of article." - tags: [Tag1, Tag2] + tags: + - canonical_tag --- ``` @@ -183,7 +184,7 @@ The following sections detail the most usual entries. | `icon` | Page icon. | Path | | | `status` | Will display a symbol on nav | `new`, `deprecated` or `tutorial` | | | `hide` | Used to turn off features (e.g. table of content) | [`tags` `toc` `nav`]| | -| `tags` | Used for internal and external search indexing | String[] | `tags: [ "slurm", "containers" ]` | +| `tags` | Used for internal and external search indexing. Must be canonical keys from [`docs/assets/tags.yml`](assets/tags.yml) — see that file for the full list and aliases. | String[] | `tags: [ slurm, containers ]` | | `search: exclude` | Used to exclude page from internal search | Bool | `search: exclude: True`| | `search: boost` | Used to increase or decrease weight in internal search | Float | `search: boost: 0.1` to lower weight, `search: boost: 10` to raise weight | diff --git a/docs/Policy/Acceptable_Use_Policy.md b/docs/Policy/Acceptable_Use_Policy.md index 910ad4bad..6acfa43ae 100644 --- a/docs/Policy/Acceptable_Use_Policy.md +++ b/docs/Policy/Acceptable_Use_Policy.md @@ -1,6 +1,7 @@ --- created_at: '2021-01-13T00:20:08Z' -tags: [] +tags: +- account --- ## Usage diff --git a/docs/Policy/Access_Policy.md b/docs/Policy/Access_Policy.md index 7d3bf1179..23043e276 100644 --- a/docs/Policy/Access_Policy.md +++ b/docs/Policy/Access_Policy.md @@ -1,6 +1,8 @@ --- created_at: '2021-01-13T00:17:34Z' -tags: [] +tags: +- access +- account --- REANNZ provides access to New Zealand’s national services for High Performance Computing (HPC) Compute and Analytics, Consultancy, and Training, supported by research data sharing and transfer services. This policy applies to HPC Compute and Analytics, and Consultancy services. diff --git a/docs/Policy/Account_Requests_for_non_Tuakiri_Members.md b/docs/Policy/Account_Requests_for_non_Tuakiri_Members.md index 2d37e8938..9dde32dec 100644 --- a/docs/Policy/Account_Requests_for_non_Tuakiri_Members.md +++ b/docs/Policy/Account_Requests_for_non_Tuakiri_Members.md @@ -1,9 +1,9 @@ --- created_at: '2018-05-28T02:55:23Z' tags: -- onboarding -- tuakiri -- mynesi +- tutorial +- access +- account title: Account Requests for non-Tuakiri Members --- diff --git a/docs/Policy/Acknowledgement-Citation_and_Publication.md b/docs/Policy/Acknowledgement-Citation_and_Publication.md index c837a6bdc..49514e1c3 100644 --- a/docs/Policy/Acknowledgement-Citation_and_Publication.md +++ b/docs/Policy/Acknowledgement-Citation_and_Publication.md @@ -1,6 +1,7 @@ --- created_at: '2021-01-13T00:24:35Z' -tags: [] +tags: +- account title: Acknowledgement, Citation and Publication --- diff --git a/docs/Policy/Allocation_classes.md b/docs/Policy/Allocation_classes.md index c8e7a7a35..e3c46ff1e 100644 --- a/docs/Policy/Allocation_classes.md +++ b/docs/Policy/Allocation_classes.md @@ -2,6 +2,8 @@ created_at: '2019-04-25T22:26:56Z' hide: - toc +tags: +- account --- The allocation class granted to your project is used to decide who pays for that aspect of your project's consumption of REANNZ HPC services. diff --git a/docs/Policy/How_we_review_applications.md b/docs/Policy/How_we_review_applications.md index 56b3b6108..962d42e92 100644 --- a/docs/Policy/How_we_review_applications.md +++ b/docs/Policy/How_we_review_applications.md @@ -1,7 +1,7 @@ --- created_at: '2018-05-18T02:26:58Z' tags: -- tqp +- account title: How we review applications vote_count: 2 vote_sum: 0 diff --git a/docs/Policy/Licence_Policy.md b/docs/Policy/Licence_Policy.md index 4010f323c..0972c34f6 100644 --- a/docs/Policy/Licence_Policy.md +++ b/docs/Policy/Licence_Policy.md @@ -1,6 +1,7 @@ --- created_at: '2019-08-07T03:50:45Z' -tags: [] +tags: +- software --- With very few exceptions, we do not hold software licences of our own. If you wish to use any of the proprietary software installed on Mahuika, you, or more likely your institution or department, will need to have an appropriate licence. diff --git a/docs/Policy/Privacy_Policy.md b/docs/Policy/Privacy_Policy.md index 22a0e20d8..57543a66e 100644 --- a/docs/Policy/Privacy_Policy.md +++ b/docs/Policy/Privacy_Policy.md @@ -1,6 +1,7 @@ --- created_at: '2021-03-31T04:19:38Z' -tags: [] +tags: +- account title: Privacy Policy vote_count: 0 vote_sum: 0 diff --git a/docs/Policy/Security_Policy.md b/docs/Policy/Security_Policy.md index 4fc2ff084..edfab8bc8 100644 --- a/docs/Policy/Security_Policy.md +++ b/docs/Policy/Security_Policy.md @@ -1,7 +1,8 @@ --- created_at: '2026-05-06' description: "Security principles and governance for the REANNZ HPC Platform." -tags: [] +tags: +- access --- ## 1. Purpose diff --git a/docs/Service_Subscriptions/Contracts_and_Billing/Billing_process.md b/docs/Service_Subscriptions/Contracts_and_Billing/Billing_process.md index 09f99a5fe..d206b60c7 100644 --- a/docs/Service_Subscriptions/Contracts_and_Billing/Billing_process.md +++ b/docs/Service_Subscriptions/Contracts_and_Billing/Billing_process.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-06T05:48:34Z' -tags: [] +tags: +- account title: Billing process vote_count: 0 vote_sum: 0 diff --git a/docs/Service_Subscriptions/Contracts_and_Billing/Types_of_contracts.md b/docs/Service_Subscriptions/Contracts_and_Billing/Types_of_contracts.md index 1e4ba4a81..a108482e9 100644 --- a/docs/Service_Subscriptions/Contracts_and_Billing/Types_of_contracts.md +++ b/docs/Service_Subscriptions/Contracts_and_Billing/Types_of_contracts.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-05T23:23:28Z' -tags: [] +tags: +- account title: Types of contracts vote_count: 0 vote_sum: 0 diff --git a/docs/Service_Subscriptions/Pricing.md b/docs/Service_Subscriptions/Pricing.md index 28b49b9a5..b2c186acd 100644 --- a/docs/Service_Subscriptions/Pricing.md +++ b/docs/Service_Subscriptions/Pricing.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-05T23:56:56Z' -tags: [] +tags: +- account title: Pricing vote_count: 0 vote_sum: 0 diff --git a/docs/Service_Subscriptions/Research_Developer_Cloud/User_Guides.md b/docs/Service_Subscriptions/Research_Developer_Cloud/User_Guides.md index 119b5fa47..cc443890f 100644 --- a/docs/Service_Subscriptions/Research_Developer_Cloud/User_Guides.md +++ b/docs/Service_Subscriptions/Research_Developer_Cloud/User_Guides.md @@ -2,9 +2,7 @@ created_at: '2025-09-24T21:33:58Z' title: User Guides tags: - - rdc - cloud - - VM --- Our Research Developer Cloud enables easier and more adaptable collaboration around research data. diff --git a/docs/Service_Subscriptions/Service_Governance/Allocation_approvals.md b/docs/Service_Subscriptions/Service_Governance/Allocation_approvals.md index fe27e3af5..8ad5d6f79 100644 --- a/docs/Service_Subscriptions/Service_Governance/Allocation_approvals.md +++ b/docs/Service_Subscriptions/Service_Governance/Allocation_approvals.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-05T23:49:27Z' -tags: [] +tags: +- account title: Allocation approvals vote_count: 0 vote_sum: 0 diff --git a/docs/Service_Subscriptions/Service_Governance/Service_Governance_contact.md b/docs/Service_Subscriptions/Service_Governance/Service_Governance_contact.md index 11dc34b33..41926d327 100644 --- a/docs/Service_Subscriptions/Service_Governance/Service_Governance_contact.md +++ b/docs/Service_Subscriptions/Service_Governance/Service_Governance_contact.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-05T23:47:26Z' -tags: [] +tags: +- account title: Service Governance contact vote_count: 0 vote_sum: 0 diff --git a/docs/Service_Subscriptions/Service_Governance/Subscriber_Monthly_Usage_Reports.md b/docs/Service_Subscriptions/Service_Governance/Subscriber_Monthly_Usage_Reports.md index 2c4ae47b8..4359f83f5 100644 --- a/docs/Service_Subscriptions/Service_Governance/Subscriber_Monthly_Usage_Reports.md +++ b/docs/Service_Subscriptions/Service_Governance/Subscriber_Monthly_Usage_Reports.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-05T23:50:46Z' -tags: [] +tags: +- account title: Subscriber Monthly Usage Reports vote_count: 0 vote_sum: 0 diff --git a/docs/Service_Subscriptions/What_is_a_Subscription.md b/docs/Service_Subscriptions/What_is_a_Subscription.md index d25b5d1d3..ddc619bb1 100644 --- a/docs/Service_Subscriptions/What_is_a_Subscription.md +++ b/docs/Service_Subscriptions/What_is_a_Subscription.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-05T23:18:57Z' -tags: [] +tags: +- account title: What is a Subscription? --- diff --git a/docs/Software/Available_Applications/ABAQUS.md b/docs/Software/Available_Applications/ABAQUS.md index 65db68172..8d409c812 100644 --- a/docs/Software/Available_Applications/ABAQUS.md +++ b/docs/Software/Available_Applications/ABAQUS.md @@ -4,8 +4,7 @@ tags: - engineering - gpu - mpi -- omp -- fea +- openmp --- {% set app_name = page.title | trim %} diff --git a/docs/Software/Available_Applications/ANSYS.md b/docs/Software/Available_Applications/ANSYS.md index 838e4c777..12b523d1d 100644 --- a/docs/Software/Available_Applications/ANSYS.md +++ b/docs/Software/Available_Applications/ANSYS.md @@ -2,8 +2,7 @@ created_at: '2015-10-15T02:15:46Z' tags: - engineering -- cfd -- fea +- earth_science description: How to best use ANSYS products on the Mahuika cluster. --- diff --git a/docs/Software/Available_Applications/AlphaFold.md b/docs/Software/Available_Applications/AlphaFold.md index 8640fb9d1..e735f430c 100644 --- a/docs/Software/Available_Applications/AlphaFold.md +++ b/docs/Software/Available_Applications/AlphaFold.md @@ -1,6 +1,9 @@ --- created_at: '2021-08-17T03:13:55Z' -tags: [] +tags: +- biology +- machine_learning +- gpu title: AlphaFold vote_count: 2 vote_sum: 2 diff --git a/docs/Software/Available_Applications/Apptainer.md b/docs/Software/Available_Applications/Apptainer.md index 243a7d3f0..15e258b0b 100644 --- a/docs/Software/Available_Applications/Apptainer.md +++ b/docs/Software/Available_Applications/Apptainer.md @@ -2,11 +2,7 @@ created_at: '2025-01-01T00:00:00Z' description: How to use Apptainer containers on the NeSI HPC. tags: - - apptainer - - container - - docker - - portable - - reproducibility + - containers --- Apptainer simplifies the creation and execution of containers on compute clusters, ensuring software components are portable and reproducible. It is an open-source fork of the Singularity project and shares much of the same functionality. Apptainer is distributed under the [BSD License](https://github.com/apptainer/apptainer/blob/main/LICENSE.md). diff --git a/docs/Software/Available_Applications/BLAST.md b/docs/Software/Available_Applications/BLAST.md index a623fd701..84e51300a 100644 --- a/docs/Software/Available_Applications/BLAST.md +++ b/docs/Software/Available_Applications/BLAST.md @@ -1,7 +1,6 @@ --- created_at: '2015-08-27T04:44:00Z' tags: -- mahuika - biology title: BLAST vote_count: 1 diff --git a/docs/Software/Available_Applications/BRAKER.md b/docs/Software/Available_Applications/BRAKER.md index 0681703c2..35c154fb2 100644 --- a/docs/Software/Available_Applications/BRAKER.md +++ b/docs/Software/Available_Applications/BRAKER.md @@ -1,6 +1,7 @@ --- created_at: '2023-03-06T19:04:56Z' -tags: [] +tags: +- biology vote_count: 0 vote_sum: 0 zendesk_article_id: 6529511928207 diff --git a/docs/Software/Available_Applications/CESM.md b/docs/Software/Available_Applications/CESM.md index 579f0a78f..7fa9b7a3b 100644 --- a/docs/Software/Available_Applications/CESM.md +++ b/docs/Software/Available_Applications/CESM.md @@ -1,8 +1,7 @@ --- created_at: '2020-11-02T03:07:06Z' -tags: - - climate - - modelling +tags: + - earth_science description: Supported applications page on CESM hide: - toc diff --git a/docs/Software/Available_Applications/COMSOL.md b/docs/Software/Available_Applications/COMSOL.md index cc2c233d2..f44c966d0 100644 --- a/docs/Software/Available_Applications/COMSOL.md +++ b/docs/Software/Available_Applications/COMSOL.md @@ -2,10 +2,7 @@ created_at: '2019-03-26T00:36:24Z' tags: - engineering -- cae -- multiphysics -- cfd -- fea +- earth_science description: Running COMSOL multiphysics on the Mahuika cluster. vote_count: 1 vote_sum: 1 diff --git a/docs/Software/Available_Applications/CP2K.md b/docs/Software/Available_Applications/CP2K.md index 7f0f9bad0..16dc01aaf 100644 --- a/docs/Software/Available_Applications/CP2K.md +++ b/docs/Software/Available_Applications/CP2K.md @@ -2,10 +2,6 @@ created_at: '2015-09-08T03:11:50Z' tags: - chemistry -- Density Functional Theory -- Molecular Dynamics -- QMMM -- Computational Chemistry title: CP2K --- diff --git a/docs/Software/Available_Applications/Clair3.md b/docs/Software/Available_Applications/Clair3.md index e90442685..5f873327a 100644 --- a/docs/Software/Available_Applications/Clair3.md +++ b/docs/Software/Available_Applications/Clair3.md @@ -1,6 +1,7 @@ --- created_at: '2022-08-10T21:31:45Z' -tags: [] +tags: +- biology title: Clair3 vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/Delft3D.md b/docs/Software/Available_Applications/Delft3D.md index 87f3d93a8..a5c5d8517 100644 --- a/docs/Software/Available_Applications/Delft3D.md +++ b/docs/Software/Available_Applications/Delft3D.md @@ -2,11 +2,7 @@ created_at: '2020-06-26T06:09:34Z' description: How to run Delft3D hydrodynamic and morphodynamic modelling on NeSI. tags: - - hydrodynamics - - morphodynamics - - particle modelling - - water quality testing - - wave modelling + - earth_science --- {% set app_name = "Delft3D_FM" %} diff --git a/docs/Software/Available_Applications/Dorado.md b/docs/Software/Available_Applications/Dorado.md index f888ba7ca..fe93ca696 100644 --- a/docs/Software/Available_Applications/Dorado.md +++ b/docs/Software/Available_Applications/Dorado.md @@ -1,6 +1,7 @@ --- created_at: '2023-03-21T09:33:04Z' -tags: [] +tags: +- biology title: Dorado vote_count: 5 vote_sum: 3 diff --git a/docs/Software/Available_Applications/FlexiBLAS.md b/docs/Software/Available_Applications/FlexiBLAS.md index 686009b47..be88974a0 100644 --- a/docs/Software/Available_Applications/FlexiBLAS.md +++ b/docs/Software/Available_Applications/FlexiBLAS.md @@ -2,7 +2,9 @@ created_at: '2024-02-15T03:27:38Z' hidden: false position: 0 -tags: [] +tags: +- software +- parallel vote_count: 0 vote_sum: 0 zendesk_article_id: 9027967596303 diff --git a/docs/Software/Available_Applications/GATK.md b/docs/Software/Available_Applications/GATK.md index 93b42eed7..5c4ccf883 100644 --- a/docs/Software/Available_Applications/GATK.md +++ b/docs/Software/Available_Applications/GATK.md @@ -1,6 +1,7 @@ --- created_at: '2023-02-21T21:21:50Z' -tags: [] +tags: +- biology title: GATK vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/GROMACS.md b/docs/Software/Available_Applications/GROMACS.md index 19367428d..c9c92000f 100644 --- a/docs/Software/Available_Applications/GROMACS.md +++ b/docs/Software/Available_Applications/GROMACS.md @@ -1,8 +1,7 @@ --- created_at: '2019-02-21T02:46:25Z' -tags: - - Molecular Dynamics - - chemistry +tags: + - chemistry description: How to run GROMACS on the Mahuika cluster --- diff --git a/docs/Software/Available_Applications/GUFI.md b/docs/Software/Available_Applications/GUFI.md index 01d1111da..9fd79cd3a 100644 --- a/docs/Software/Available_Applications/GUFI.md +++ b/docs/Software/Available_Applications/GUFI.md @@ -1,8 +1,7 @@ --- created_at: '2025-10-30T17:00:00Z' -tags: - - locate - - find +tags: +- storage title: GUFI vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/Gaussian.md b/docs/Software/Available_Applications/Gaussian.md index e9f19a85c..1bbe2b3fe 100644 --- a/docs/Software/Available_Applications/Gaussian.md +++ b/docs/Software/Available_Applications/Gaussian.md @@ -2,7 +2,6 @@ created_at: '2015-07-29T23:31:02Z' tags: - chemistry -- Density Functional Theory description: How to run Gaussian on the Mahuika HPC --- diff --git a/docs/Software/Available_Applications/Java.md b/docs/Software/Available_Applications/Java.md index fdbd0345e..af7bc333f 100644 --- a/docs/Software/Available_Applications/Java.md +++ b/docs/Software/Available_Applications/Java.md @@ -1,8 +1,7 @@ --- created_at: '2015-08-18T02:30:33Z' tags: -- mahuika -- general +- software title: Java vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/Julia.md b/docs/Software/Available_Applications/Julia.md index ee6dbefee..c9a14e369 100644 --- a/docs/Software/Available_Applications/Julia.md +++ b/docs/Software/Available_Applications/Julia.md @@ -1,6 +1,7 @@ --- created_at: '2019-09-23T11:11:16Z' -tags: [] +tags: +- julia title: Julia vote_count: 3 vote_sum: 3 diff --git a/docs/Software/Available_Applications/Keras.md b/docs/Software/Available_Applications/Keras.md index 51d1f54bd..afe964585 100644 --- a/docs/Software/Available_Applications/Keras.md +++ b/docs/Software/Available_Applications/Keras.md @@ -1,6 +1,8 @@ --- created_at: '2019-07-24T04:30:33Z' -tags: [] +tags: +- machine_learning +- python title: Keras vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/LAMMPS.md b/docs/Software/Available_Applications/LAMMPS.md index 115d77b58..444e70823 100644 --- a/docs/Software/Available_Applications/LAMMPS.md +++ b/docs/Software/Available_Applications/LAMMPS.md @@ -1,8 +1,7 @@ --- created_at: '2025-10-12T08:00:00Z' -tags: - - Molecular Dynamics - - chemistry +tags: + - chemistry description: How to run LAMMPS on the Mahuika cluster --- diff --git a/docs/Software/Available_Applications/Lambda_Stack.md b/docs/Software/Available_Applications/Lambda_Stack.md index 65db375bc..38719273d 100644 --- a/docs/Software/Available_Applications/Lambda_Stack.md +++ b/docs/Software/Available_Applications/Lambda_Stack.md @@ -1,8 +1,7 @@ --- created_at: '2021-01-05T20:28:08Z' tags: -- ai -- machine learning +- machine_learning - software description: Information about using Lambda Stack status: [] diff --git a/docs/Software/Available_Applications/MAKER.md b/docs/Software/Available_Applications/MAKER.md index 2a30bad86..e3153f204 100644 --- a/docs/Software/Available_Applications/MAKER.md +++ b/docs/Software/Available_Applications/MAKER.md @@ -1,6 +1,7 @@ --- created_at: '2020-03-13T03:23:18Z' -tags: [] +tags: +- biology title: MAKER vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/MATLAB.md b/docs/Software/Available_Applications/MATLAB.md index 19af6e406..6bb883f08 100644 --- a/docs/Software/Available_Applications/MATLAB.md +++ b/docs/Software/Available_Applications/MATLAB.md @@ -3,7 +3,7 @@ created_at: '2015-10-14T22:58:53Z' tags: - mathematics - engineering -- Machine Learning +- machine_learning description: Examples and tips on how to use MATLAB on the Mahuika platform. --- diff --git a/docs/Software/Available_Applications/Miniforge3.md b/docs/Software/Available_Applications/Miniforge3.md index b9b92fc1a..e890ec04e 100644 --- a/docs/Software/Available_Applications/Miniforge3.md +++ b/docs/Software/Available_Applications/Miniforge3.md @@ -1,12 +1,8 @@ --- created_at: '2020-06-23T23:10:13Z' -tags: +tags: - python - - environments - - conda - - anaconda - - miniconda - - mamba + - software --- {% set app_name = page.title | trim %} diff --git a/docs/Software/Available_Applications/NWChem.md b/docs/Software/Available_Applications/NWChem.md index 2211a0aa7..b5f06c7c2 100644 --- a/docs/Software/Available_Applications/NWChem.md +++ b/docs/Software/Available_Applications/NWChem.md @@ -2,7 +2,6 @@ created_at: '2015-12-13T20:47:26Z' tags: - chemistry -- Density Functional Theory title: NWChem vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/ORCA.md b/docs/Software/Available_Applications/ORCA.md index 3debe5c49..ff084ab10 100644 --- a/docs/Software/Available_Applications/ORCA.md +++ b/docs/Software/Available_Applications/ORCA.md @@ -1,7 +1,6 @@ --- created_at: '2015-11-09T21:20:24Z' tags: -- Density Functional Theory - chemistry title: ORCA vote_count: 6 diff --git a/docs/Software/Available_Applications/OpenFOAM.md b/docs/Software/Available_Applications/OpenFOAM.md index b9db0111f..b61e590e7 100644 --- a/docs/Software/Available_Applications/OpenFOAM.md +++ b/docs/Software/Available_Applications/OpenFOAM.md @@ -2,9 +2,7 @@ created_at: '2019-02-24T22:16:04Z' tags: - engineering -- cfd -- cae -- fea +- earth_science vote_count: 0 vote_sum: 0 --- diff --git a/docs/Software/Available_Applications/OpenSees.md b/docs/Software/Available_Applications/OpenSees.md index 90eed9b4c..c6469ddb4 100644 --- a/docs/Software/Available_Applications/OpenSees.md +++ b/docs/Software/Available_Applications/OpenSees.md @@ -1,8 +1,7 @@ --- created_at: '2019-08-15T05:48:41Z' tags: -- geo -- earthquake +- earth_science title: OpenSees vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/Python.md b/docs/Software/Available_Applications/Python.md index 931d91c81..34fc96b2e 100644 --- a/docs/Software/Available_Applications/Python.md +++ b/docs/Software/Available_Applications/Python.md @@ -1,8 +1,7 @@ --- created_at: '2015-08-18T05:16:01Z' tags: -- Machine Learning -- language +- machine_learning title: Python --- diff --git a/docs/Software/Available_Applications/R.md b/docs/Software/Available_Applications/R.md index d2903c302..3f7ed2d34 100644 --- a/docs/Software/Available_Applications/R.md +++ b/docs/Software/Available_Applications/R.md @@ -1,8 +1,7 @@ --- created_at: '2015-09-07T00:34:30Z' tags: -- mahuika -- R +- r vote_count: 7 vote_sum: 3 zendesk_article_id: 209338087 diff --git a/docs/Software/Available_Applications/RAxML.md b/docs/Software/Available_Applications/RAxML.md index bb2a8ceb1..c94f8aafa 100644 --- a/docs/Software/Available_Applications/RAxML.md +++ b/docs/Software/Available_Applications/RAxML.md @@ -1,7 +1,6 @@ --- created_at: '2017-12-11T07:58:07Z' tags: -- mahuika - biology title: RAxML vote_count: 1 diff --git a/docs/Software/Available_Applications/Relion.md b/docs/Software/Available_Applications/Relion.md index fea4a2511..42a050707 100644 --- a/docs/Software/Available_Applications/Relion.md +++ b/docs/Software/Available_Applications/Relion.md @@ -1,10 +1,7 @@ --- created_at: '2019-09-23T00:08:13Z' tags: -- no_toc -- no_lic -- no_desc -- no_ver +- biology title: Relion vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/Supernova.md b/docs/Software/Available_Applications/Supernova.md index 762ba4252..8474bfc21 100644 --- a/docs/Software/Available_Applications/Supernova.md +++ b/docs/Software/Available_Applications/Supernova.md @@ -1,7 +1,6 @@ --- created_at: '2019-01-27T23:11:01Z' tags: -- mahuika - biology description: Documentation of Supernova module --- diff --git a/docs/Software/Available_Applications/Synda.md b/docs/Software/Available_Applications/Synda.md index a1f7fed94..136d431d2 100644 --- a/docs/Software/Available_Applications/Synda.md +++ b/docs/Software/Available_Applications/Synda.md @@ -2,7 +2,7 @@ created_at: '2019-10-14T21:25:00Z' tags: - software -- geo +- earth_science title: Synda status: deprecated --- diff --git a/docs/Software/Available_Applications/TensorFlow_on_CPUs.md b/docs/Software/Available_Applications/TensorFlow_on_CPUs.md index addfa7dfe..a264e777f 100644 --- a/docs/Software/Available_Applications/TensorFlow_on_CPUs.md +++ b/docs/Software/Available_Applications/TensorFlow_on_CPUs.md @@ -1,6 +1,8 @@ --- created_at: '2019-06-14T05:35:45Z' -tags: [] +tags: +- machine_learning +- python status: deprecated --- diff --git a/docs/Software/Available_Applications/Trinity.md b/docs/Software/Available_Applications/Trinity.md index bf0ebafff..b5f76826c 100644 --- a/docs/Software/Available_Applications/Trinity.md +++ b/docs/Software/Available_Applications/Trinity.md @@ -1,6 +1,7 @@ --- created_at: '2019-06-03T23:23:13Z' -tags: [] +tags: +- biology title: Trinity vote_count: 2 vote_sum: 2 diff --git a/docs/Software/Available_Applications/VASP.md b/docs/Software/Available_Applications/VASP.md index 1e2469a16..77a0b5732 100644 --- a/docs/Software/Available_Applications/VASP.md +++ b/docs/Software/Available_Applications/VASP.md @@ -2,9 +2,6 @@ created_at: '2015-09-08T03:11:50Z' tags: - chemistry -- Density Functional Theory -- Molecular Dynamics -- Computational Chemistry title: VASP --- diff --git a/docs/Software/Available_Applications/VTune.md b/docs/Software/Available_Applications/VTune.md index 670f960fd..bc9a57f1d 100644 --- a/docs/Software/Available_Applications/VTune.md +++ b/docs/Software/Available_Applications/VTune.md @@ -1,6 +1,7 @@ --- created_at: '2020-01-15T21:56:01Z' -tags: [] +tags: +- profiling --- diff --git a/docs/Software/Available_Applications/VirSorter.md b/docs/Software/Available_Applications/VirSorter.md index 8355a184f..177ef2ede 100644 --- a/docs/Software/Available_Applications/VirSorter.md +++ b/docs/Software/Available_Applications/VirSorter.md @@ -1,6 +1,7 @@ --- created_at: '2021-02-23T02:54:11Z' -tags: [] +tags: +- biology title: VirSorter vote_count: 1 vote_sum: -1 diff --git a/docs/Software/Available_Applications/WRF.md b/docs/Software/Available_Applications/WRF.md index 5ba3c5b7c..3924b602b 100644 --- a/docs/Software/Available_Applications/WRF.md +++ b/docs/Software/Available_Applications/WRF.md @@ -1,7 +1,8 @@ --- created_at: '2020-11-02T23:31:38Z' description: How to compile and run WRF on the REANNZ cluster -tags: [] +tags: +- earth_science --- The Weather Research and Forecasting (WRF) Model is a next-generation diff --git a/docs/Software/Available_Applications/index.md b/docs/Software/Available_Applications/index.md index 71e5b538d..16370569d 100644 --- a/docs/Software/Available_Applications/index.md +++ b/docs/Software/Available_Applications/index.md @@ -2,8 +2,7 @@ title: Supported Applications template: supported_apps.html tags: - - lmod - - module + - software hide: - toc --- diff --git a/docs/Software/Available_Applications/ipyrad.md b/docs/Software/Available_Applications/ipyrad.md index 905f4f87d..5b5ff2dee 100644 --- a/docs/Software/Available_Applications/ipyrad.md +++ b/docs/Software/Available_Applications/ipyrad.md @@ -1,6 +1,8 @@ --- created_at: '2022-09-26T08:09:35Z' -tags: [] +tags: +- biology +- python title: ipyrad vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Available_Applications/ollama.md b/docs/Software/Available_Applications/ollama.md index dcc5b97b7..d245bb0fc 100644 --- a/docs/Software/Available_Applications/ollama.md +++ b/docs/Software/Available_Applications/ollama.md @@ -1,8 +1,8 @@ --- created_at: 2026-05-04 description: How to run ollama on the REANNZ GPUs -tags: - - llm +tags: + - machine_learning --- diff --git a/docs/Software/Available_Applications/ont-guppy-gpu.md b/docs/Software/Available_Applications/ont-guppy-gpu.md index 3322b66ce..17c7b54ee 100644 --- a/docs/Software/Available_Applications/ont-guppy-gpu.md +++ b/docs/Software/Available_Applications/ont-guppy-gpu.md @@ -1,6 +1,8 @@ --- created_at: '2022-03-22T07:46:51Z' -tags: [] +tags: +- biology +- gpu title: ont-guppy-gpu vote_count: 5 vote_sum: 3 diff --git a/docs/Software/Available_Applications/snpEff.md b/docs/Software/Available_Applications/snpEff.md index 8bb3a7c63..5c856ea93 100644 --- a/docs/Software/Available_Applications/snpEff.md +++ b/docs/Software/Available_Applications/snpEff.md @@ -1,6 +1,7 @@ --- created_at: '2023-07-13T01:04:38Z' -tags: [] +tags: +- biology title: snpEff vote_count: 0 vote_sum: 0 diff --git a/docs/Software/Containers/NVIDIA_GPU_Containers.md b/docs/Software/Containers/NVIDIA_GPU_Containers.md index cefffc639..349a8c786 100644 --- a/docs/Software/Containers/NVIDIA_GPU_Containers.md +++ b/docs/Software/Containers/NVIDIA_GPU_Containers.md @@ -1,6 +1,9 @@ --- created_at: '2020-04-30T01:28:34Z' -tags: [] +tags: +- containers +- gpu +title: NVIDIA GPU Containers --- NVIDIA provides access to GPU accelerated software through their diff --git a/docs/Software/Parallel_Computing/MPI_Scaling_Example.md b/docs/Software/Parallel_Computing/MPI_Scaling_Example.md index 7b8ce2508..9899d5e11 100644 --- a/docs/Software/Parallel_Computing/MPI_Scaling_Example.md +++ b/docs/Software/Parallel_Computing/MPI_Scaling_Example.md @@ -1,6 +1,9 @@ --- created_at: '2019-09-22T21:07:28Z' -tags: [] +tags: +- mpi +- parallel +- profiling vote_count: 2 vote_sum: 0 zendesk_article_id: 360001173875 diff --git a/docs/Software/Parallel_Computing/Multithreading_Scaling_Example.md b/docs/Software/Parallel_Computing/Multithreading_Scaling_Example.md index 09c1ea98d..2907abaf4 100644 --- a/docs/Software/Parallel_Computing/Multithreading_Scaling_Example.md +++ b/docs/Software/Parallel_Computing/Multithreading_Scaling_Example.md @@ -1,6 +1,9 @@ --- created_at: '2019-09-22T21:07:48Z' -tags: [] +tags: +- openmp +- parallel +- profiling vote_count: 0 vote_sum: 0 zendesk_article_id: 360001173895 diff --git a/docs/Software/Parallel_Computing/OpenMP_settings.md b/docs/Software/Parallel_Computing/OpenMP_settings.md index 2af837c31..d192c8b98 100644 --- a/docs/Software/Parallel_Computing/OpenMP_settings.md +++ b/docs/Software/Parallel_Computing/OpenMP_settings.md @@ -1,6 +1,8 @@ --- created_at: '2019-07-22T03:46:24Z' -tags: [] +tags: +- openmp +- parallel --- [OpenMP](https://en.wikipedia.org/wiki/OpenMP) is an application diff --git a/docs/Software/Parallel_Computing/Simultaneous_Multithreading.md b/docs/Software/Parallel_Computing/Simultaneous_Multithreading.md index edc4a68a6..5d23e745d 100644 --- a/docs/Software/Parallel_Computing/Simultaneous_Multithreading.md +++ b/docs/Software/Parallel_Computing/Simultaneous_Multithreading.md @@ -1,11 +1,7 @@ --- created_at: '2018-11-15T22:10:10Z' -tags: - - hyperthreading - - hyper-threading - - multithreading - - simultaneous - - SMT +tags: + - openmp description: How to use simultaneous multithreading (hyper-threading) on Mahuika. --- diff --git a/docs/Software/Parallel_Computing/Thread_Placement_and_Thread_Affinity.md b/docs/Software/Parallel_Computing/Thread_Placement_and_Thread_Affinity.md index 4b153aff1..6fd24b887 100644 --- a/docs/Software/Parallel_Computing/Thread_Placement_and_Thread_Affinity.md +++ b/docs/Software/Parallel_Computing/Thread_Placement_and_Thread_Affinity.md @@ -1,6 +1,8 @@ --- created_at: '2019-06-13T04:08:43Z' -tags: [] +tags: +- openmp +- parallel title: Thread Placement and Thread Affinity --- diff --git a/docs/Software/Profiling_and_Debugging/Debugging.md b/docs/Software/Profiling_and_Debugging/Debugging.md index 54a3eb9ba..9121defdc 100644 --- a/docs/Software/Profiling_and_Debugging/Debugging.md +++ b/docs/Software/Profiling_and_Debugging/Debugging.md @@ -1,6 +1,7 @@ --- created_at: '2019-06-16T21:30:28Z' -tags: [] +tags: +- profiling vote_count: 1 vote_sum: 1 zendesk_article_id: 360001008136 diff --git a/docs/Software/Profiling_and_Debugging/Job_Scaling_Ascertaining_job_dimensions.md b/docs/Software/Profiling_and_Debugging/Job_Scaling_Ascertaining_job_dimensions.md index 9852b7fdd..051bbb8d6 100644 --- a/docs/Software/Profiling_and_Debugging/Job_Scaling_Ascertaining_job_dimensions.md +++ b/docs/Software/Profiling_and_Debugging/Job_Scaling_Ascertaining_job_dimensions.md @@ -1,7 +1,7 @@ --- created_at: '2019-01-31T01:17:22Z' tags: - - scaling + - profiling title: Job Scaling - Ascertaining job dimensions description: Instructions on finding the resources needed to run a job --- diff --git a/docs/Software/Profiling_and_Debugging/Profiler-VTune.md b/docs/Software/Profiling_and_Debugging/Profiler-VTune.md index 2ba09c6ac..09c9a5ac0 100644 --- a/docs/Software/Profiling_and_Debugging/Profiler-VTune.md +++ b/docs/Software/Profiling_and_Debugging/Profiler-VTune.md @@ -1,6 +1,7 @@ --- created_at: '2021-08-25T02:05:42Z' -tags: [] +tags: +- profiling title: 'Profiler: VTune' vote_count: 1 vote_sum: -1 diff --git a/docs/Software/Profiling_and_Debugging/Tracing-Tau.md b/docs/Software/Profiling_and_Debugging/Tracing-Tau.md index 3e11912a1..bd84c751b 100644 --- a/docs/Software/Profiling_and_Debugging/Tracing-Tau.md +++ b/docs/Software/Profiling_and_Debugging/Tracing-Tau.md @@ -3,7 +3,7 @@ created_at: '2026-03-18' description: "A guide on how to use the TAU Performance System to trace an MPI-based C++ application on the Mahuika HPC cluster." tags: - profiling - - MPI + - mpi title: 'Tau for MPI Tracing' --- diff --git a/docs/Software/Software_Installation_Request.md b/docs/Software/Software_Installation_Request.md index 362db8e99..a0db5c51c 100644 --- a/docs/Software/Software_Installation_Request.md +++ b/docs/Software/Software_Installation_Request.md @@ -1,8 +1,7 @@ --- created_at: '2018-07-31T10:59:09Z' -tags: +tags: - software - - install title: Software Installation Request --- diff --git a/docs/Software/Software_Version_Management.md b/docs/Software/Software_Version_Management.md index d74660d48..93d20fce2 100644 --- a/docs/Software/Software_Version_Management.md +++ b/docs/Software/Software_Version_Management.md @@ -2,9 +2,6 @@ created_at: '2019-07-04T20:48:57Z' tags: - software - - versions - - toolchain - - module title: Software Version Management --- diff --git a/docs/Storage/Automatic_cleaning_of_nobackup.md b/docs/Storage/Automatic_cleaning_of_nobackup.md index e50f3cb1b..21d465e8e 100644 --- a/docs/Storage/Automatic_cleaning_of_nobackup.md +++ b/docs/Storage/Automatic_cleaning_of_nobackup.md @@ -2,8 +2,7 @@ created_at: '2019-09-15T23:36:59Z' description: Description of our automatic deletion of old data. tags: -- data storage -- autocleaning +- storage --- The automatic cleaning feature is a programme to regularly delete selected files from project directories in our scratch filesystem (`/nesi/nobackup`). diff --git a/docs/Storage/Data_Recovery.md b/docs/Storage/Data_Recovery.md index ddca8898a..328050c9f 100644 --- a/docs/Storage/Data_Recovery.md +++ b/docs/Storage/Data_Recovery.md @@ -2,7 +2,7 @@ created_at: '2018-05-22T01:49:31Z' description: How to retreive lost data from the REANNZ HPC filesystem. tags: -- data storage +- storage --- Snapshots are read only copies of the filesystems at a point in time. diff --git a/docs/Storage/File_permissions_and_groups.md b/docs/Storage/File_permissions_and_groups.md index 95b804286..f88765a34 100644 --- a/docs/Storage/File_permissions_and_groups.md +++ b/docs/Storage/File_permissions_and_groups.md @@ -2,8 +2,8 @@ created_at: '2018-05-21T05:14:00Z' description: How to manage file access on the REANNZ HPC filesystems. tags: -- nobackup -- project +- storage +- account --- diff --git a/docs/Storage/Filesystems_and_Quotas.md b/docs/Storage/Filesystems_and_Quotas.md index 3b0c18c9e..5a880bd44 100644 --- a/docs/Storage/Filesystems_and_Quotas.md +++ b/docs/Storage/Filesystems_and_Quotas.md @@ -2,7 +2,7 @@ created_at: '2018-05-02T04:06:16Z' description: Overview of the REANNZ HPC filesystems. tags: -- data storage +- storage --- The HPC compute nodes, login nodes and OnDemand all share access to the same filesystems. diff --git a/docs/Storage/Long_Term_Storage/Configuring_s3cmd.md b/docs/Storage/Long_Term_Storage/Configuring_s3cmd.md index 296031333..d6b765f14 100644 --- a/docs/Storage/Long_Term_Storage/Configuring_s3cmd.md +++ b/docs/Storage/Long_Term_Storage/Configuring_s3cmd.md @@ -1,11 +1,9 @@ --- created_at: 2025-10-01 description: "Freezer s3cmd configuration" -tags: - - Freezer +tags: - storage - - config - - s3cmd + - file_transfer --- To use Freezer and to configure `s3cmd`, you will need a current Freezer allocation. To apply for an allocation please go to [MyNeSI](https://my.nesi.org.nz/). diff --git a/docs/Storage/Long_Term_Storage/Freezer_Guide.md b/docs/Storage/Long_Term_Storage/Freezer_Guide.md index bb89f3126..ff2ed797f 100644 --- a/docs/Storage/Long_Term_Storage/Freezer_Guide.md +++ b/docs/Storage/Long_Term_Storage/Freezer_Guide.md @@ -1,8 +1,7 @@ --- created_at: 2025-10-01 description: "Freezer Quick Start" -tags: - - Freezer +tags: - storage --- !!! info s3cmd configuration required diff --git a/docs/Storage/Long_Term_Storage/Freezer_long_term_storage.md b/docs/Storage/Long_Term_Storage/Freezer_long_term_storage.md index db89b299d..0ca6c26a8 100644 --- a/docs/Storage/Long_Term_Storage/Freezer_long_term_storage.md +++ b/docs/Storage/Long_Term_Storage/Freezer_long_term_storage.md @@ -1,8 +1,7 @@ --- created_at: 2025-04-04 description: "Our Freezer service allows you to store your data on tape for long term storage." -tags: - - Freezer +tags: - storage --- diff --git a/docs/Storage/Long_Term_Storage/Other_Useful_Commands.md b/docs/Storage/Long_Term_Storage/Other_Useful_Commands.md index 5d006f4f8..16817f6b0 100644 --- a/docs/Storage/Long_Term_Storage/Other_Useful_Commands.md +++ b/docs/Storage/Long_Term_Storage/Other_Useful_Commands.md @@ -1,8 +1,7 @@ --- created_at: 2025-10-01 description: "Other Freezer commands" -tags: - - Freezer +tags: - storage --- diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-06-23.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-06-23.md index bc1921558..da6227ccc 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-06-23.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-06-23.md @@ -1,8 +1,8 @@ --- created_at: '2025-06-23T03:42:47Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/06/23 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-07-17.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-07-17.md index 6acd8639e..944127eb1 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-07-17.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-07-17.md @@ -1,8 +1,8 @@ --- created_at: '2025-07-17T03:42:47Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/07/17 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-05.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-05.md index 8aa3fb0eb..e8e433d5d 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-05.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-05.md @@ -1,8 +1,8 @@ --- created_at: '2025-08-05T03:42:47Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/08/05 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-26.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-26.md index fadcf83e5..f89de0a6f 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-26.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-26.md @@ -1,8 +1,8 @@ --- created_at: '2025-08-26T03:42:47Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/08/26 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-09-22.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-09-22.md index a134a9b35..e153a0a52 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-09-22.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-09-22.md @@ -1,8 +1,8 @@ --- created_at: '2025-09-22T03:42:47Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/09/22 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-15.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-15.md index 460746507..43cd1c208 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-15.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-15.md @@ -1,8 +1,8 @@ --- created_at: '2025-10-15T10:00:00Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/10/15 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-29.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-29.md index fe062367f..5e8a3af05 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-29.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-29.md @@ -1,8 +1,8 @@ --- created_at: '2025-10-29T10:00:00Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/10/29 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-12-01.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-12-01.md index 7674891f8..0a8c1fa33 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-12-01.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-12-01.md @@ -1,8 +1,8 @@ --- created_at: '2025-12-01T10:00:00Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2025/12/01 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-13.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-13.md index 64482333a..75e516d98 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-13.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-13.md @@ -1,8 +1,8 @@ --- created_at: '2026-01-13T10:00:00Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2026/01/13 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-18.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-18.md index 0eb3afbe7..59b1e3597 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-18.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-18.md @@ -1,8 +1,8 @@ --- created_at: '2026-02-18T10:00:00Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2026/02/18 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-04-28.md b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-04-28.md index 60aab4e2c..8102cbe6a 100644 --- a/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-04-28.md +++ b/docs/Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-04-28.md @@ -1,8 +1,8 @@ --- created_at: '2026-04-28T10:00:00Z' tags: -- freezer -- release notes +- storage +- release_notes title: 2026/04/28 description: Freezer upgrade release notes search: diff --git a/docs/Storage/Long_Term_Storage/Troubleshooting.md b/docs/Storage/Long_Term_Storage/Troubleshooting.md index 4b96f98ea..0aec65993 100644 --- a/docs/Storage/Long_Term_Storage/Troubleshooting.md +++ b/docs/Storage/Long_Term_Storage/Troubleshooting.md @@ -1,8 +1,7 @@ --- created_at: 2025-10-01 description: "Common issues when using Freezer" -tags: - - Freezer +tags: - storage --- diff --git a/docs/Storage/Models.md b/docs/Storage/Models.md index e54b11c51..6e2f497d9 100644 --- a/docs/Storage/Models.md +++ b/docs/Storage/Models.md @@ -3,7 +3,7 @@ created_at: '2026-05-13' description: "Centrally maintained large language models available on Mahuika at /opt/nesi/models." tags: - gpu - - machine learning + - machine_learning - storage hide: toc --- diff --git a/docs/Storage/Offsite_Storage_Options.md b/docs/Storage/Offsite_Storage_Options.md index 689417243..d4961b5c2 100644 --- a/docs/Storage/Offsite_Storage_Options.md +++ b/docs/Storage/Offsite_Storage_Options.md @@ -1,8 +1,8 @@ --- created_at: 2026-01-27 description: -tags: -- data storage +tags: +- storage --- There are many other places you can store your data, which is most suitable will depend on what resources your group can budget for and what high capacity storage (HCS) your university offers. diff --git a/docs/Tutorials/Introduction_To_HPC/Bash_Shell.md b/docs/Tutorials/Introduction_To_HPC/Bash_Shell.md index fdf3ed1ef..a920cae4c 100644 --- a/docs/Tutorials/Introduction_To_HPC/Bash_Shell.md +++ b/docs/Tutorials/Introduction_To_HPC/Bash_Shell.md @@ -2,6 +2,9 @@ created_at: 2026-01-15 description: Using the bash shell for file operations on Mahuika status: tutorial +tags: +- tutorial +- access --- diff --git a/docs/Tutorials/Introduction_To_HPC/Parallel.md b/docs/Tutorials/Introduction_To_HPC/Parallel.md index 6bc6234cb..2e6ab36e4 100644 --- a/docs/Tutorials/Introduction_To_HPC/Parallel.md +++ b/docs/Tutorials/Introduction_To_HPC/Parallel.md @@ -1,6 +1,9 @@ --- created_at: 2026-01-16 status: tutorial +tags: +- tutorial +- parallel --- diff --git a/docs/Tutorials/Introduction_To_HPC/Resources.md b/docs/Tutorials/Introduction_To_HPC/Resources.md index 70827cd3b..d1b635e35 100644 --- a/docs/Tutorials/Introduction_To_HPC/Resources.md +++ b/docs/Tutorials/Introduction_To_HPC/Resources.md @@ -1,6 +1,9 @@ --- created_at: 2026-01-16 status: tutorial +tags: +- tutorial +- slurm --- !!! time "30 Minutes" diff --git a/docs/Tutorials/Introduction_To_HPC/Scaling.md b/docs/Tutorials/Introduction_To_HPC/Scaling.md index 2fc11a4c7..1d1c0d90d 100644 --- a/docs/Tutorials/Introduction_To_HPC/Scaling.md +++ b/docs/Tutorials/Introduction_To_HPC/Scaling.md @@ -2,6 +2,9 @@ created_at: 2026-01-19 description: Best Practice for getting your job to use multiple CPUs status: tutorial +tags: +- tutorial +- profiling --- !!! time "45 Minutes" diff --git a/docs/Tutorials/Introduction_To_HPC/Submitting_Your_First_Job.md b/docs/Tutorials/Introduction_To_HPC/Submitting_Your_First_Job.md index b363b9b07..2c0524108 100644 --- a/docs/Tutorials/Introduction_To_HPC/Submitting_Your_First_Job.md +++ b/docs/Tutorials/Introduction_To_HPC/Submitting_Your_First_Job.md @@ -2,7 +2,6 @@ created_at: '2019-01-07T01:10:28Z' tags: - slurm -- scheduler - tutorial description: Tutorial on how to submit your first Slurm job status: tutorial diff --git a/docs/Tutorials/Introduction_To_HPC/What_is_an_HPC.md b/docs/Tutorials/Introduction_To_HPC/What_is_an_HPC.md index cb0217913..d1a9e41a2 100644 --- a/docs/Tutorials/Introduction_To_HPC/What_is_an_HPC.md +++ b/docs/Tutorials/Introduction_To_HPC/What_is_an_HPC.md @@ -1,6 +1,8 @@ --- description: Introduction to basic terminology and principles of High Performance Computing status: tutorial +tags: +- tutorial --- !!! time "10 Minutes" diff --git a/docs/assets/module-list.json b/docs/assets/module-list.json index f33ea100e..15d363f12 100644 --- a/docs/assets/module-list.json +++ b/docs/assets/module-list.json @@ -6,7 +6,8 @@ "gpu", "mpi", "omp", - "fea" + "fea", + "openmp" ], "extensions": [], "licence_type": "proprietary", @@ -374,7 +375,8 @@ "domains": [ "biology", "chemistry", - "gpu" + "gpu", + "machine_learning" ], "extensions": [], "licence_type": "", @@ -628,7 +630,8 @@ "engineering", "visualisation", "cfd", - "fea" + "fea", + "earth_science" ], "extensions": [], "licence_type": "proprietary", @@ -3435,7 +3438,8 @@ "cae", "multiphysics", "cfd", - "fea" + "fea", + "earth_science" ], "extensions": [], "licence_type": "proprietary", @@ -6229,7 +6233,10 @@ }, "FlexiBLAS": { "description": "FlexiBLAS is a wrapper library that enables the exchange of the BLAS and LAPACK implementation\nused by a program without recompiling or relinking it.", - "domains": [], + "domains": [ + "software", + "parallel" + ], "extensions": [], "licence_type": "", "homepage": "https://gitlab.mpi-magdeburg.mpg.de/software/flexiblas-release", @@ -8855,7 +8862,8 @@ "ipyrad": { "description": "ipyrad is an interactive toolkit for assembly and analysis of restriction-site associated genomic\n data sets (e.g., RAD, ddRAD, GBS) for population genetic and phylogenetic studies.", "domains": [ - "biology" + "biology", + "python" ], "extensions": [ "cython-3.2.4", @@ -9021,7 +9029,8 @@ "domains": [ "language", "mahuika", - "general" + "general", + "software" ], "extensions": [], "licence_type": "", @@ -9238,7 +9247,8 @@ "Julia": { "description": "A high-level, high-performance dynamic language for technical computing.\n\nThis version was compiled from source with USE_INTEL_JITEVENTS=1 to enable profiling with VTune.", "domains": [ - "language" + "language", + "julia" ], "extensions": [], "licence_type": "", @@ -12644,7 +12654,8 @@ "conda", "anaconda", "miniconda", - "mamba" + "mamba", + "software" ], "extensions": [], "licence_type": "", @@ -14760,7 +14771,8 @@ "engineering", "cfd", "cae", - "fea" + "fea", + "earth_science" ], "extensions": [], "licence_type": "", @@ -17661,7 +17673,8 @@ "machine_learning", "visualisation", "mahuika", - "R" + "R", + "r" ], "extensions": [ "abind-1.4-5", @@ -22786,7 +22799,9 @@ }, "VTune": { "description": "Intel VTune Amplifier XE is the premier performance profiler for C, C++, C#, Fortran,\n Assembly and Java.", - "domains": [], + "domains": [ + "profiling" + ], "extensions": [], "licence_type": "", "homepage": "https://software.intel.com/en-us/vtune", @@ -23438,4 +23453,4 @@ "force_hide": "False", "force_show": "False" } -} \ No newline at end of file +} diff --git a/docs/assets/tag-index.json b/docs/assets/tag-index.json new file mode 100644 index 000000000..b32a80a1a --- /dev/null +++ b/docs/assets/tag-index.json @@ -0,0 +1,1686 @@ +{ + "slurm": [ + { + "title": "Identity Changes for Crown Research Institutes", + "path": "Announcements/Identity_Changes_for_Crown_Research_Institutes.md" + }, + { + "title": "Slurm Job email", + "path": "Announcements/Slurm_Job_email.md" + }, + { + "title": "Batch Computing Guide", + "path": "Batch_Computing/Batch_Computing_Guide.md" + }, + { + "title": "Checking resource usage", + "path": "Batch_Computing/Checking_resource_usage.md" + }, + { + "title": "Fair Share", + "path": "Batch_Computing/Fair_Share.md" + }, + { + "title": "Job Arrays", + "path": "Batch_Computing/Job_Arrays.md" + }, + { + "title": "Job Checkpointing", + "path": "Batch_Computing/Job_Checkpointing.md" + }, + { + "title": "Job Limits", + "path": "Batch_Computing/Job_Limits.md" + }, + { + "title": "Job prioritisation", + "path": "Batch_Computing/Job_prioritisation.md" + }, + { + "title": "SLURM: Best Practice", + "path": "Batch_Computing/SLURM-Best_Practice.md" + }, + { + "title": "Using GPUs", + "path": "Batch_Computing/Using_GPUs.md" + }, + { + "title": "Slurm: Reference Sheet", + "path": "Getting_Started/Cheat_Sheets/Slurm-Reference_Sheet.md" + }, + { + "title": "How do I request memory", + "path": "Getting_Started/FAQs/How_do_I_request_memory.md" + }, + { + "title": "How do I run my Python Notebook through SLURM", + "path": "Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md" + }, + { + "title": "Why is my job taking a long time to start", + "path": "Getting_Started/FAQs/Why_is_my_job_taking_a_long_time_to_start.md" + }, + { + "title": "Job efficiency review", + "path": "Getting_Started/Job_efficiency_review.md" + }, + { + "title": "Slurm Interactive Sessions", + "path": "Interactive_Computing/Slurm_Interactive_Sessions.md" + }, + { + "title": "Job Arrays", + "path": "Software/Parallel_Computing/Job_Arrays.md" + }, + { + "title": "Finding Job Efficiency", + "path": "Software/Profiling_and_Debugging/Finding_Job_Efficiency.md" + }, + { + "title": "Slurm Native Profiling", + "path": "Software/Profiling_and_Debugging/Slurm_Native_Profiling.md" + }, + { + "title": "Resources", + "path": "Tutorials/Introduction_To_HPC/Resources.md" + }, + { + "title": "Submitting Your First Job", + "path": "Tutorials/Introduction_To_HPC/Submitting_Your_First_Job.md" + } + ], + "gpu": [ + { + "title": "Hardware", + "path": "Batch_Computing/Hardware.md" + }, + { + "title": "Using GPUs", + "path": "Batch_Computing/Using_GPUs.md" + }, + { + "title": "ABAQUS", + "path": "Software/Available_Applications/ABAQUS.md" + }, + { + "title": "AlphaFold", + "path": "Software/Available_Applications/AlphaFold.md" + }, + { + "title": "TensorFlow on GPUs", + "path": "Software/Available_Applications/TensorFlow_on_GPUs.md" + }, + { + "title": "ont-guppy-gpu", + "path": "Software/Available_Applications/ont-guppy-gpu.md" + }, + { + "title": "NVIDIA GPU Containers", + "path": "Software/Containers/NVIDIA_GPU_Containers.md" + }, + { + "title": "Run an executable under Apptainer on GPU", + "path": "Software/Containers/Run_an_executable_under_Apptainer_on_gpu.md" + }, + { + "title": "Models", + "path": "Storage/Models.md" + } + ], + "mpi": [ + { + "title": "ABAQUS", + "path": "Software/Available_Applications/ABAQUS.md" + }, + { + "title": "MPI Scaling Example", + "path": "Software/Parallel_Computing/MPI_Scaling_Example.md" + }, + { + "title": "Tau for MPI Tracing", + "path": "Software/Profiling_and_Debugging/Tracing-Tau.md" + } + ], + "openmp": [ + { + "title": "ABAQUS", + "path": "Software/Available_Applications/ABAQUS.md" + }, + { + "title": "Multithreading Scaling Example", + "path": "Software/Parallel_Computing/Multithreading_Scaling_Example.md" + }, + { + "title": "OpenMP settings", + "path": "Software/Parallel_Computing/OpenMP_settings.md" + }, + { + "title": "Simultaneous Multithreading", + "path": "Software/Parallel_Computing/Simultaneous_Multithreading.md" + }, + { + "title": "Thread Placement and Thread Affinity", + "path": "Software/Parallel_Computing/Thread_Placement_and_Thread_Affinity.md" + } + ], + "machine_learning": [ + { + "title": "AlphaFold", + "path": "Software/Available_Applications/AlphaFold.md" + }, + { + "title": "Keras", + "path": "Software/Available_Applications/Keras.md" + }, + { + "title": "Lambda Stack", + "path": "Software/Available_Applications/Lambda_Stack.md" + }, + { + "title": "MATLAB", + "path": "Software/Available_Applications/MATLAB.md" + }, + { + "title": "Python", + "path": "Software/Available_Applications/Python.md" + }, + { + "title": "TensorFlow on CPUs", + "path": "Software/Available_Applications/TensorFlow_on_CPUs.md" + }, + { + "title": "Ollama", + "path": "Software/Available_Applications/ollama.md" + }, + { + "title": "Models", + "path": "Storage/Models.md" + } + ], + "python": [ + { + "title": "How do I run my Python Notebook through SLURM", + "path": "Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md" + }, + { + "title": "Jupyter Interactive Sessions", + "path": "Interactive_Computing/Jupyter_Interactive_Sessions.md" + }, + { + "title": "Marimo Interactive Sessions", + "path": "Interactive_Computing/Marimo_Interactive_Sessions.md" + }, + { + "title": "Jupyter kernels Manual management", + "path": "Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md" + }, + { + "title": "Jupyter kernels - Tool-assisted management", + "path": "Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md" + }, + { + "title": "Keras", + "path": "Software/Available_Applications/Keras.md" + }, + { + "title": "Miniforge3", + "path": "Software/Available_Applications/Miniforge3.md" + }, + { + "title": "TensorFlow on CPUs", + "path": "Software/Available_Applications/TensorFlow_on_CPUs.md" + }, + { + "title": "ipyrad", + "path": "Software/Available_Applications/ipyrad.md" + }, + { + "title": "uv", + "path": "Software/Available_Applications/uv.md" + } + ], + "containers": [ + { + "title": "How can I view images generated on the cluster", + "path": "Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md" + }, + { + "title": "Apptainer - Containers on HPC", + "path": "Software/Available_Applications/Apptainer.md" + }, + { + "title": "NVIDIA GPU Containers", + "path": "Software/Containers/NVIDIA_GPU_Containers.md" + }, + { + "title": "Run an executable under Apptainer in parallel", + "path": "Software/Containers/Run_an_executable_under_Apptainer_in_parallel.md" + }, + { + "title": "Run an executable under Apptainer on GPU", + "path": "Software/Containers/Run_an_executable_under_Apptainer_on_gpu.md" + } + ], + "storage": [ + { + "title": "Temporary directories", + "path": "Batch_Computing/Temporary_directories.md" + }, + { + "title": "Data Transfer to Freezer", + "path": "Data_Transfer/Globus/Data_Transfer_to_Freezer.md" + }, + { + "title": "How can I give read only team members access to my files", + "path": "Getting_Started/FAQs/How_can_I_give_read_only_team_members_access_to_my_files.md" + }, + { + "title": "How can I let my fellow project team members read or write my files", + "path": "Getting_Started/FAQs/How_can_I_let_my_fellow_project_team_members_read_or_write_my_files.md" + }, + { + "title": "How do I find out the size of a directory", + "path": "Getting_Started/FAQs/How_do_I_find_out_the_size_of_a_directory.md" + }, + { + "title": "Where Should I Store My Data?", + "path": "Getting_Started/FAQs/Where_should_I_store_my_data.md" + }, + { + "title": "GUFI", + "path": "Software/Available_Applications/GUFI.md" + }, + { + "title": "Automatic cleaning of nobackup", + "path": "Storage/Automatic_cleaning_of_nobackup.md" + }, + { + "title": "Data Recovery", + "path": "Storage/Data_Recovery.md" + }, + { + "title": "File permissions and groups", + "path": "Storage/File_permissions_and_groups.md" + }, + { + "title": "Filesystems and Quotas", + "path": "Storage/Filesystems_and_Quotas.md" + }, + { + "title": "Configuring s3cmd", + "path": "Storage/Long_Term_Storage/Configuring_s3cmd.md" + }, + { + "title": "Freezer Guide", + "path": "Storage/Long_Term_Storage/Freezer_Guide.md" + }, + { + "title": "Freezer long term storage", + "path": "Storage/Long_Term_Storage/Freezer_long_term_storage.md" + }, + { + "title": "Other Useful Commands", + "path": "Storage/Long_Term_Storage/Other_Useful_Commands.md" + }, + { + "title": "2025/06/23", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-06-23.md" + }, + { + "title": "2025/07/17", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-07-17.md" + }, + { + "title": "2025/08/05", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-05.md" + }, + { + "title": "2025/08/26", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-26.md" + }, + { + "title": "2025/09/22", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-09-22.md" + }, + { + "title": "2025/10/15", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-15.md" + }, + { + "title": "2025/10/29", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-29.md" + }, + { + "title": "2025/12/01", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-12-01.md" + }, + { + "title": "2026/01/13", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-13.md" + }, + { + "title": "2026/02/18", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-18.md" + }, + { + "title": "2026/04/28", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-04-28.md" + }, + { + "title": "Troubleshooting", + "path": "Storage/Long_Term_Storage/Troubleshooting.md" + }, + { + "title": "Models", + "path": "Storage/Models.md" + }, + { + "title": "Offsite Storage Options", + "path": "Storage/Offsite_Storage_Options.md" + } + ], + "file_transfer": [ + { + "title": "Data Transfer Overview", + "path": "Data_Transfer/Data_Transfer_Overview.md" + }, + { + "title": "MobaXterm (Windows)", + "path": "Data_Transfer/Data_Transfer_Using_MobaXterm.md" + }, + { + "title": "WinSCP (Windows)", + "path": "Data_Transfer/Data_Transfer_Using_WinSCP.md" + }, + { + "title": "FileSender", + "path": "Data_Transfer/FileSender.md" + }, + { + "title": "File Managers", + "path": "Data_Transfer/File_Managers.md" + }, + { + "title": "Filesystem Mounts using SSHFS", + "path": "Data_Transfer/Filesystem_Mounts_using_SSHFS.md" + }, + { + "title": "Add your Computer to Globus", + "path": "Data_Transfer/Globus/Add_Your_Computer_To_Globus.md" + }, + { + "title": "Bookmarks", + "path": "Data_Transfer/Globus/Bookmarks.md" + }, + { + "title": "Data Transfer Between Two Personal Computers", + "path": "Data_Transfer/Globus/Data_Transfer_Between_Personal_Endpoints.md" + }, + { + "title": "Data Transfer to Freezer", + "path": "Data_Transfer/Globus/Data_Transfer_to_Freezer.md" + }, + { + "title": "Data Transfer using Globus", + "path": "Data_Transfer/Globus/Data_Transfer_using_Globus.md" + }, + { + "title": "First Time Setup", + "path": "Data_Transfer/Globus/First_Time_Setup.md" + }, + { + "title": "Globus CLI", + "path": "Data_Transfer/Globus/Globus_CLI.md" + }, + { + "title": "Globus Overview", + "path": "Data_Transfer/Globus/Globus_Overview.md" + }, + { + "title": "Share Collections", + "path": "Data_Transfer/Globus/Share_Collections.md" + }, + { + "title": "Signing up to a Free Globus Subscription", + "path": "Data_Transfer/Globus/Signing_Up_To_Globus_Subscription.md" + }, + { + "title": "Sync'ing with globus-automate", + "path": "Data_Transfer/Globus/Syncing_files_with_globus_automate.md" + }, + { + "title": "RClone", + "path": "Data_Transfer/RClone.md" + }, + { + "title": "Rsync", + "path": "Data_Transfer/Rsync.md" + }, + { + "title": "SCP (Secure Copy)", + "path": "Data_Transfer/SCP.md" + }, + { + "title": "WinSCP/PuTTY Setup (Windows)", + "path": "Getting_Started/Accessing_the_HPCs/WinSCP-PuTTY_Setup_Windows.md" + }, + { + "title": "Configuring s3cmd", + "path": "Storage/Long_Term_Storage/Configuring_s3cmd.md" + } + ], + "interactive": [ + { + "title": "Batch Computing Guide", + "path": "Batch_Computing/Batch_Computing_Guide.md" + }, + { + "title": "Data Transfer Using OnDemand", + "path": "Data_Transfer/Data_Transfer_Using_OnDemand.md" + }, + { + "title": "First Time Login", + "path": "Getting_Started/Accessing_the_HPCs/First_Time_Login.md" + }, + { + "title": "How do I run my Python Notebook through SLURM", + "path": "Getting_Started/FAQs/How_do_I_run_my_Python_Notebook_through_SLURM.md" + }, + { + "title": "Jupyter Interactive Sessions", + "path": "Interactive_Computing/Jupyter_Interactive_Sessions.md" + }, + { + "title": "Marimo Interactive Sessions", + "path": "Interactive_Computing/Marimo_Interactive_Sessions.md" + }, + { + "title": "Jupyter kernels Manual management", + "path": "Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md" + }, + { + "title": "Jupyter kernels - Tool-assisted management", + "path": "Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md" + }, + { + "title": "MATLAB", + "path": "Interactive_Computing/OnDemand/Apps/MATLAB.md" + }, + { + "title": "Virtual desktop", + "path": "Interactive_Computing/OnDemand/Apps/virtual_desktop.md" + }, + { + "title": "NeSI OnDemand how-to guide", + "path": "Interactive_Computing/OnDemand/how_to_guide.md" + }, + { + "title": "OnDemand Troubleshooting", + "path": "Interactive_Computing/OnDemand/ood_troubleshooting.md" + }, + { + "title": "Pluto Interactive Sessions", + "path": "Interactive_Computing/Pluto_Interactive_Sessions.md" + }, + { + "title": "Slurm Interactive Sessions", + "path": "Interactive_Computing/Slurm_Interactive_Sessions.md" + } + ], + "software": [ + { + "title": "Application Support Model", + "path": "Policy/Application_Support_Model.md" + }, + { + "title": "Licence Policy", + "path": "Policy/Licence_Policy.md" + }, + { + "title": "FlexiBLAS", + "path": "Software/Available_Applications/FlexiBLAS.md" + }, + { + "title": "Java", + "path": "Software/Available_Applications/Java.md" + }, + { + "title": "Lambda Stack", + "path": "Software/Available_Applications/Lambda_Stack.md" + }, + { + "title": "Miniforge3", + "path": "Software/Available_Applications/Miniforge3.md" + }, + { + "title": "Synda", + "path": "Software/Available_Applications/Synda.md" + }, + { + "title": "FastStructure", + "path": "Software/Available_Applications/fastStructure.md" + }, + { + "title": "Supported Applications", + "path": "Software/Available_Applications/index.md" + }, + { + "title": "uv", + "path": "Software/Available_Applications/uv.md" + }, + { + "title": "Installing Applications Yourself", + "path": "Software/Installing_Applications_Yourself.md" + }, + { + "title": "Software Installation Request", + "path": "Software/Software_Installation_Request.md" + }, + { + "title": "Software Version Management", + "path": "Software/Software_Version_Management.md" + }, + { + "title": "Environment & Modules", + "path": "Tutorials/Introduction_To_HPC/Environment_And_Modules.md" + } + ], + "version_control": [ + { + "title": "Connecting to the Cluster", + "path": "Getting_Started/Accessing_the_HPCs/Connecting_to_the_Cluster.md" + }, + { + "title": "Git Bash (Windows)", + "path": "Getting_Started/Accessing_the_HPCs/Git_Bash_Windows.md" + }, + { + "title": "Git: Reference Sheet", + "path": "Getting_Started/Cheat_Sheets/Git-Reference_Sheet.md" + }, + { + "title": "Git Hosting Platform Setup", + "path": "Getting_Started/Cheat_Sheets/Git-provider-setup.md" + } + ], + "access": [ + { + "title": "Identity Changes for Crown Research Institutes", + "path": "Announcements/Identity_Changes_for_Crown_Research_Institutes.md" + }, + { + "title": "File Managers", + "path": "Data_Transfer/File_Managers.md" + }, + { + "title": "Filesystem Mounts using SSHFS", + "path": "Data_Transfer/Filesystem_Mounts_using_SSHFS.md" + }, + { + "title": "SCP (Secure Copy)", + "path": "Data_Transfer/SCP.md" + }, + { + "title": "Connecting to the Cluster", + "path": "Getting_Started/Accessing_the_HPCs/Connecting_to_the_Cluster.md" + }, + { + "title": "First Time Login", + "path": "Getting_Started/Accessing_the_HPCs/First_Time_Login.md" + }, + { + "title": "Git Bash (Windows)", + "path": "Getting_Started/Accessing_the_HPCs/Git_Bash_Windows.md" + }, + { + "title": "Login Troubleshooting", + "path": "Getting_Started/Accessing_the_HPCs/Login_Troubleshooting.md" + }, + { + "title": "MobaXterm Setup (Windows)", + "path": "Getting_Started/Accessing_the_HPCs/MobaXterm_Setup_Windows.md" + }, + { + "title": "Port Forwarding", + "path": "Getting_Started/Accessing_the_HPCs/Port_Forwarding.md" + }, + { + "title": "Standard Terminal Setup", + "path": "Getting_Started/Accessing_the_HPCs/Standard_Terminal_Setup.md" + }, + { + "title": "VSCode", + "path": "Getting_Started/Accessing_the_HPCs/VSCode.md" + }, + { + "title": "WinSCP/PuTTY Setup (Windows)", + "path": "Getting_Started/Accessing_the_HPCs/WinSCP-PuTTY_Setup_Windows.md" + }, + { + "title": "Windows Subsystem for Linux (WSL)", + "path": "Getting_Started/Accessing_the_HPCs/Windows_Subsystem_for_Linux_WSL.md" + }, + { + "title": "X11", + "path": "Getting_Started/Accessing_the_HPCs/X11.md" + }, + { + "title": "Bash: Reference Sheet", + "path": "Getting_Started/Cheat_Sheets/Bash-Reference_Sheet.md" + }, + { + "title": "Can I change my time zone to New Zealand time", + "path": "Getting_Started/FAQs/Can_I_change_my_time_zone_to_New_Zealand_time.md" + }, + { + "title": "Converting from Windows style to UNIX style line endings", + "path": "Getting_Started/FAQs/Converting_from_Windows_style_to_UNIX_style_line_endings.md" + }, + { + "title": "How can I view images generated on the cluster", + "path": "Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md" + }, + { + "title": "How do I fix my locale and language settings", + "path": "Getting_Started/FAQs/How_do_I_fix_my_locale_and_language_settings.md" + }, + { + "title": "How do I replace my Additional Authentication Credentials", + "path": "Getting_Started/FAQs/How_do_I_replace_my_Additional_Authentication_Credentials.md" + }, + { + "title": "What Is A Trusted Device", + "path": "Getting_Started/FAQs/What_Is_A_Trusted_Device.md" + }, + { + "title": "What are my-bashrc and-bash profile for", + "path": "Getting_Started/FAQs/What_are_my-bashrc_and-bash_profile_for.md" + }, + { + "title": "What is Multiple Factor Authentication MFA", + "path": "Getting_Started/FAQs/What_is_Multiple_Factor_Authentication_MFA.md" + }, + { + "title": "Why am I seeing Account is not ready", + "path": "Getting_Started/FAQs/Why_am_I_seeing_Account_is_not_ready.md" + }, + { + "title": "Logging in to my.nesi.org.nz", + "path": "Getting_Started/my-nesi-org-nz/Logging_in_to_my-nesi-org-nz.md" + }, + { + "title": "Tuakiri Attribute Validator", + "path": "Getting_Started/my-nesi-org-nz/Tuakiri_Attribute_Validator.md" + }, + { + "title": "Access Policy", + "path": "Policy/Access_Policy.md" + }, + { + "title": "Account Requests for non-Tuakiri Members", + "path": "Policy/Account_Requests_for_non_Tuakiri_Members.md" + }, + { + "title": "Security Policy", + "path": "Policy/Security_Policy.md" + }, + { + "title": "Bash Shell", + "path": "Tutorials/Introduction_To_HPC/Bash_Shell.md" + } + ], + "profiling": [ + { + "title": "Job efficiency review", + "path": "Getting_Started/Job_efficiency_review.md" + }, + { + "title": "VTune", + "path": "Software/Available_Applications/VTune.md" + }, + { + "title": "MPI Scaling Example", + "path": "Software/Parallel_Computing/MPI_Scaling_Example.md" + }, + { + "title": "Multithreading Scaling Example", + "path": "Software/Parallel_Computing/Multithreading_Scaling_Example.md" + }, + { + "title": "Debugging", + "path": "Software/Profiling_and_Debugging/Debugging.md" + }, + { + "title": "Job Scaling - Ascertaining job dimensions", + "path": "Software/Profiling_and_Debugging/Job_Scaling_Ascertaining_job_dimensions.md" + }, + { + "title": "Profiler: VTune", + "path": "Software/Profiling_and_Debugging/Profiler-VTune.md" + }, + { + "title": "Slurm Native Profiling", + "path": "Software/Profiling_and_Debugging/Slurm_Native_Profiling.md" + }, + { + "title": "Tau for MPI Tracing", + "path": "Software/Profiling_and_Debugging/Tracing-Tau.md" + }, + { + "title": "Scaling", + "path": "Tutorials/Introduction_To_HPC/Scaling.md" + } + ], + "chemistry": [ + { + "title": "CP2K", + "path": "Software/Available_Applications/CP2K.md" + }, + { + "title": "GROMACS", + "path": "Software/Available_Applications/GROMACS.md" + }, + { + "title": "Gaussian", + "path": "Software/Available_Applications/Gaussian.md" + }, + { + "title": "LAMMPS", + "path": "Software/Available_Applications/LAMMPS.md" + }, + { + "title": "Molpro", + "path": "Software/Available_Applications/Molpro.md" + }, + { + "title": "NWChem", + "path": "Software/Available_Applications/NWChem.md" + }, + { + "title": "ORCA", + "path": "Software/Available_Applications/ORCA.md" + }, + { + "title": "VASP", + "path": "Software/Available_Applications/VASP.md" + } + ], + "biology": [ + { + "title": "AlphaFold", + "path": "Software/Available_Applications/AlphaFold.md" + }, + { + "title": "BLAST", + "path": "Software/Available_Applications/BLAST.md" + }, + { + "title": "BRAKER", + "path": "Software/Available_Applications/BRAKER.md" + }, + { + "title": "Clair3", + "path": "Software/Available_Applications/Clair3.md" + }, + { + "title": "Dorado", + "path": "Software/Available_Applications/Dorado.md" + }, + { + "title": "GATK", + "path": "Software/Available_Applications/GATK.md" + }, + { + "title": "MAKER", + "path": "Software/Available_Applications/MAKER.md" + }, + { + "title": "RAxML", + "path": "Software/Available_Applications/RAxML.md" + }, + { + "title": "Relion", + "path": "Software/Available_Applications/Relion.md" + }, + { + "title": "Supernova", + "path": "Software/Available_Applications/Supernova.md" + }, + { + "title": "Trinity", + "path": "Software/Available_Applications/Trinity.md" + }, + { + "title": "VirSorter", + "path": "Software/Available_Applications/VirSorter.md" + }, + { + "title": "FastStructure", + "path": "Software/Available_Applications/fastStructure.md" + }, + { + "title": "ipyrad", + "path": "Software/Available_Applications/ipyrad.md" + }, + { + "title": "ont-guppy-gpu", + "path": "Software/Available_Applications/ont-guppy-gpu.md" + }, + { + "title": "snpEff", + "path": "Software/Available_Applications/snpEff.md" + }, + { + "title": "Databases", + "path": "Storage/Databases.md" + } + ], + "engineering": [ + { + "title": "ABAQUS", + "path": "Software/Available_Applications/ABAQUS.md" + }, + { + "title": "ANSYS", + "path": "Software/Available_Applications/ANSYS.md" + }, + { + "title": "COMSOL", + "path": "Software/Available_Applications/COMSOL.md" + }, + { + "title": "FDS", + "path": "Software/Available_Applications/FDS.md" + }, + { + "title": "MATLAB", + "path": "Software/Available_Applications/MATLAB.md" + }, + { + "title": "OpenFOAM", + "path": "Software/Available_Applications/OpenFOAM.md" + } + ], + "earth_science": [ + { + "title": "ANSYS", + "path": "Software/Available_Applications/ANSYS.md" + }, + { + "title": "CESM", + "path": "Software/Available_Applications/CESM.md" + }, + { + "title": "COMSOL", + "path": "Software/Available_Applications/COMSOL.md" + }, + { + "title": "Delft3D", + "path": "Software/Available_Applications/Delft3D.md" + }, + { + "title": "OpenFOAM", + "path": "Software/Available_Applications/OpenFOAM.md" + }, + { + "title": "OpenSees", + "path": "Software/Available_Applications/OpenSees.md" + }, + { + "title": "Synda", + "path": "Software/Available_Applications/Synda.md" + }, + { + "title": "WRF", + "path": "Software/Available_Applications/WRF.md" + } + ], + "mathematics": [ + { + "title": "MATLAB", + "path": "Interactive_Computing/OnDemand/Apps/MATLAB.md" + }, + { + "title": "MATLAB", + "path": "Software/Available_Applications/MATLAB.md" + } + ], + "visualisation": [ + { + "title": "X11", + "path": "Getting_Started/Accessing_the_HPCs/X11.md" + }, + { + "title": "How can I view images generated on the cluster", + "path": "Getting_Started/FAQs/How_can_I_view_images_generated_on_the_cluster.md" + }, + { + "title": "ParaView", + "path": "Software/Available_Applications/ParaView.md" + } + ], + "workflow": [ + { + "title": "Cylc", + "path": "Software/Available_Applications/Cylc.md" + }, + { + "title": "Nextflow", + "path": "Software/Available_Applications/Nextflow.md" + }, + { + "title": "Snakemake", + "path": "Software/Available_Applications/snakemake.md" + } + ], + "parallel": [ + { + "title": "Job Arrays", + "path": "Batch_Computing/Job_Arrays.md" + }, + { + "title": "FlexiBLAS", + "path": "Software/Available_Applications/FlexiBLAS.md" + }, + { + "title": "Run an executable under Apptainer in parallel", + "path": "Software/Containers/Run_an_executable_under_Apptainer_in_parallel.md" + }, + { + "title": "Configuring Dask-MPI jobs", + "path": "Software/Parallel_Computing/Configuring_Dask_MPI_jobs.md" + }, + { + "title": "Job Arrays", + "path": "Software/Parallel_Computing/Job_Arrays.md" + }, + { + "title": "MPI Scaling Example", + "path": "Software/Parallel_Computing/MPI_Scaling_Example.md" + }, + { + "title": "Multithreading Scaling Example", + "path": "Software/Parallel_Computing/Multithreading_Scaling_Example.md" + }, + { + "title": "OpenMP settings", + "path": "Software/Parallel_Computing/OpenMP_settings.md" + }, + { + "title": "Parallel Computing", + "path": "Software/Parallel_Computing/Parallel_Computing.md" + }, + { + "title": "Thread Placement and Thread Affinity", + "path": "Software/Parallel_Computing/Thread_Placement_and_Thread_Affinity.md" + }, + { + "title": "Parallel", + "path": "Tutorials/Introduction_To_HPC/Parallel.md" + } + ], + "account": [ + { + "title": "Checking resource usage", + "path": "Batch_Computing/Checking_resource_usage.md" + }, + { + "title": "Fair Share", + "path": "Batch_Computing/Fair_Share.md" + }, + { + "title": "Job Limits", + "path": "Batch_Computing/Job_Limits.md" + }, + { + "title": "Job prioritisation", + "path": "Batch_Computing/Job_prioritisation.md" + }, + { + "title": "First Time Login", + "path": "Getting_Started/Accessing_the_HPCs/First_Time_Login.md" + }, + { + "title": "Allocations & Extensions", + "path": "Getting_Started/Allocations/Allocations_and_Extensions.md" + }, + { + "title": "Quarterly Allocation Periods", + "path": "Getting_Started/Allocations/Quarterly_allocation_periods.md" + }, + { + "title": "What is an Allocation?", + "path": "Getting_Started/Allocations/What_is_an_allocation.md" + }, + { + "title": "Creating an Account", + "path": "Getting_Started/Creating_an_Account.md" + }, + { + "title": "How can I give read only team members access to my files", + "path": "Getting_Started/FAQs/How_can_I_give_read_only_team_members_access_to_my_files.md" + }, + { + "title": "How can I let my fellow project team members read or write my files", + "path": "Getting_Started/FAQs/How_can_I_let_my_fellow_project_team_members_read_or_write_my_files.md" + }, + { + "title": "How do I replace my Additional Authentication Credentials", + "path": "Getting_Started/FAQs/How_do_I_replace_my_Additional_Authentication_Credentials.md" + }, + { + "title": "Why am I seeing Account is not ready", + "path": "Getting_Started/FAQs/Why_am_I_seeing_Account_is_not_ready.md" + }, + { + "title": "Job efficiency review", + "path": "Getting_Started/Job_efficiency_review.md" + }, + { + "title": "Adding Members to your Project", + "path": "Getting_Started/Projects/Adding_Members_to_your_Project.md" + }, + { + "title": "Applying for a New Project", + "path": "Getting_Started/Projects/Applying_for_a_New_Project.md" + }, + { + "title": "Applying to Join a Project", + "path": "Getting_Started/Projects/Applying_to_Join_a_Project.md" + }, + { + "title": "Logging in to my.nesi.org.nz", + "path": "Getting_Started/my-nesi-org-nz/Logging_in_to_my-nesi-org-nz.md" + }, + { + "title": "Managing notification preferences", + "path": "Getting_Started/my-nesi-org-nz/Managing_notification_preferences.md" + }, + { + "title": "Navigating the my.nesi.org.nz web interface", + "path": "Getting_Started/my-nesi-org-nz/Navigating_the_my-nesi-org-nz_web_interface.md" + }, + { + "title": "Project Request Form", + "path": "Getting_Started/my-nesi-org-nz/Project_Request_Form.md" + }, + { + "title": "Requesting to renew an allocation via my-nesi-org-nz", + "path": "Getting_Started/my-nesi-org-nz/Requesting_to_renew_an_allocation_via_my-nesi-org-nz.md" + }, + { + "title": "Tuakiri Attribute Validator", + "path": "Getting_Started/my-nesi-org-nz/Tuakiri_Attribute_Validator.md" + }, + { + "title": "Acceptable Use Policy", + "path": "Policy/Acceptable_Use_Policy.md" + }, + { + "title": "Access Policy", + "path": "Policy/Access_Policy.md" + }, + { + "title": "Account Requests for non-Tuakiri Members", + "path": "Policy/Account_Requests_for_non_Tuakiri_Members.md" + }, + { + "title": "Acknowledgement, Citation and Publication", + "path": "Policy/Acknowledgement-Citation_and_Publication.md" + }, + { + "title": "Allocation classes", + "path": "Policy/Allocation_classes.md" + }, + { + "title": "How we review applications", + "path": "Policy/How_we_review_applications.md" + }, + { + "title": "Privacy Policy", + "path": "Policy/Privacy_Policy.md" + }, + { + "title": "Billing process", + "path": "Service_Subscriptions/Contracts_and_Billing/Billing_process.md" + }, + { + "title": "Types of contracts", + "path": "Service_Subscriptions/Contracts_and_Billing/Types_of_contracts.md" + }, + { + "title": "Pricing", + "path": "Service_Subscriptions/Pricing.md" + }, + { + "title": "Allocation approvals", + "path": "Service_Subscriptions/Service_Governance/Allocation_approvals.md" + }, + { + "title": "Service Governance contact", + "path": "Service_Subscriptions/Service_Governance/Service_Governance_contact.md" + }, + { + "title": "Subscriber Monthly Usage Reports", + "path": "Service_Subscriptions/Service_Governance/Subscriber_Monthly_Usage_Reports.md" + }, + { + "title": "What is a Subscription?", + "path": "Service_Subscriptions/What_is_a_Subscription.md" + }, + { + "title": "File permissions and groups", + "path": "Storage/File_permissions_and_groups.md" + } + ], + "announcement": [ + { + "title": "Accessing REANNZ HPC Support during the Easter and ANZAC holidays", + "path": "Announcements/Accessing_NeSI_Support_during_the_Easter_break.md" + }, + { + "title": "Autodeletion of Scratch Filesystem", + "path": "Announcements/Autodeletion_of_Scratch_Filesystem.md" + }, + { + "title": "December holiday support restrictions", + "path": "Announcements/December_holiday_support_restrictions.md" + }, + { + "title": "Known Issues HPC3", + "path": "Announcements/Known_Issues_HPC3.md" + }, + { + "title": "Administrative updates to HPC policies", + "path": "Announcements/administrative_policy_updates.md" + }, + { + "title": "Checksums", + "path": "Data_Transfer/Checksums.md" + }, + { + "title": "Common questions about the platform refresh", + "path": "Getting_Started/FAQs/Common_questions_about_the_platform_refresh.md" + }, + { + "title": "Mahuika HPC3 Differences", + "path": "Getting_Started/FAQs/Mahuika_HPC3_Differences.md" + }, + { + "title": "Adding Members to your Project", + "path": "Getting_Started/Projects/Adding_Members_to_your_Project.md" + }, + { + "title": "Applying for a New Project", + "path": "Getting_Started/Projects/Applying_for_a_New_Project.md" + }, + { + "title": "Applying to Join a Project", + "path": "Getting_Started/Projects/Applying_to_Join_a_Project.md" + } + ], + "release_notes": [ + { + "title": "Known Issues HPC3", + "path": "Announcements/Known_Issues_HPC3.md" + }, + { + "title": "Release Notes", + "path": "Announcements/Release_Notes/index.md" + }, + { + "title": "Slurm Job email", + "path": "Announcements/Slurm_Job_email.md" + }, + { + "title": "Common questions about the platform refresh", + "path": "Getting_Started/FAQs/Common_questions_about_the_platform_refresh.md" + }, + { + "title": "Mahuika HPC3 Differences", + "path": "Getting_Started/FAQs/Mahuika_HPC3_Differences.md" + }, + { + "title": "my.nesi.org.nz release notes v2.0.1", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-1.md" + }, + { + "title": "my.nesi.org.nz release notes v2.0.3", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-0-3.md" + }, + { + "title": "my.nesi.org.nz release notes v2.1.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-1-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.10.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-10-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.11.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-11-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.12.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-12-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.13.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-13-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.14.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-14-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.15.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-15-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.16.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-16-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.17.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-17-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.18.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-18-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.19.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-19-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.2.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-2-0.md" + }, + { + "title": "My-nesi-org-nz release notes v2-20-0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-20-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.21.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-21-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.22.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-22-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.23.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-23-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.24.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-24-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.25.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-25-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.26.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-26-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.27.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-27-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.28.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-28-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.29.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-29-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.3.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-3-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.30.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-30-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.31.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-31-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.33.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-33-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.34.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-34-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.35.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-35-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.36.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-36-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.37.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-37-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.38.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-38-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.39.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-39-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.4.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-4-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.40.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-40-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.41.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-41-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.42.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-42-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.43.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-43-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.44.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-44-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.45.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-45-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.46.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-46-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.47.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-47-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.48.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-48-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.49.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-49-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.5.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-5-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.50.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-50-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.51.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-51-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.6.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-6-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.7.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-7-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.8.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-8-0.md" + }, + { + "title": "my.nesi.org.nz release notes v2.9.0", + "path": "Getting_Started/my-nesi-org-nz/Release_Notes_my-nesi-org-nz/my-nesi-org-nz_release_notes_v2-9-0.md" + }, + { + "title": "2025/06/23", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-06-23.md" + }, + { + "title": "2025/07/17", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-07-17.md" + }, + { + "title": "2025/08/05", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-05.md" + }, + { + "title": "2025/08/26", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-08-26.md" + }, + { + "title": "2025/09/22", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-09-22.md" + }, + { + "title": "2025/10/15", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-15.md" + }, + { + "title": "2025/10/29", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-10-29.md" + }, + { + "title": "2025/12/01", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2025-12-01.md" + }, + { + "title": "2026/01/13", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-13.md" + }, + { + "title": "2026/02/18", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-01-18.md" + }, + { + "title": "2026/04/28", + "path": "Storage/Long_Term_Storage/Release_Notes_freezer-nesi-org-nz/freezer-nesi-org-nz_release_notes_2026-04-28.md" + } + ], + "troubleshooting": [ + { + "title": "Fair Share", + "path": "Batch_Computing/Fair_Share.md" + }, + { + "title": "Can I change my time zone to New Zealand time", + "path": "Getting_Started/FAQs/Can_I_change_my_time_zone_to_New_Zealand_time.md" + }, + { + "title": "Converting from Windows style to UNIX style line endings", + "path": "Getting_Started/FAQs/Converting_from_Windows_style_to_UNIX_style_line_endings.md" + }, + { + "title": "How busy is the cluster?", + "path": "Getting_Started/FAQs/How_busy_is_the_cluster.md" + }, + { + "title": "How do I fix my locale and language settings", + "path": "Getting_Started/FAQs/How_do_I_fix_my_locale_and_language_settings.md" + }, + { + "title": "How do I request memory", + "path": "Getting_Started/FAQs/How_do_I_request_memory.md" + }, + { + "title": "I've run out of storage space", + "path": "Getting_Started/FAQs/Ive_run_out_of_storage_space.md" + }, + { + "title": "What does oom kill mean", + "path": "Getting_Started/FAQs/What_does_oom_kill_mean.md" + }, + { + "title": "What is a core file", + "path": "Getting_Started/FAQs/What_is_a_core_file.md" + }, + { + "title": "Why does my program crash", + "path": "Getting_Started/FAQs/Why_does_my_program_crash.md" + }, + { + "title": "Getting Help", + "path": "Getting_Started/Getting_Help.md" + }, + { + "title": "Making a Helpful Support Request", + "path": "Getting_Started/Making_a_Helpful_Support_Request.md" + }, + { + "title": "System status", + "path": "Getting_Started/System_status.md" + }, + { + "title": "OnDemand Troubleshooting", + "path": "Interactive_Computing/OnDemand/ood_troubleshooting.md" + } + ], + "ide": [ + { + "title": "VSCode", + "path": "Data_Transfer/VSCode.md" + }, + { + "title": "VSCode", + "path": "Getting_Started/Accessing_the_HPCs/VSCode.md" + }, + { + "title": "Windows Subsystem for Linux (WSL)", + "path": "Getting_Started/Accessing_the_HPCs/Windows_Subsystem_for_Linux_WSL.md" + } + ], + "r": [ + { + "title": "Jupyter kernels Manual management", + "path": "Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Manual_management.md" + }, + { + "title": "Jupyter kernels - Tool-assisted management", + "path": "Interactive_Computing/OnDemand/Apps/JupyterLab/Jupyter_kernels_Tool_assisted_management.md" + }, + { + "title": "NeSI OnDemand how-to guide", + "path": "Interactive_Computing/OnDemand/how_to_guide.md" + }, + { + "title": "R", + "path": "Software/Available_Applications/R.md" + } + ], + "julia": [ + { + "title": "Pluto Interactive Sessions", + "path": "Interactive_Computing/Pluto_Interactive_Sessions.md" + }, + { + "title": "Julia", + "path": "Software/Available_Applications/Julia.md" + } + ], + "checksum": [ + { + "title": "Checksums", + "path": "Data_Transfer/Checksums.md" + } + ], + "fairshare": [ + { + "title": "Fair Share", + "path": "Batch_Computing/Fair_Share.md" + } + ], + "tutorial": [ + { + "title": "Standard Terminal Setup", + "path": "Getting_Started/Accessing_the_HPCs/Standard_Terminal_Setup.md" + }, + { + "title": "Bash: Reference Sheet", + "path": "Getting_Started/Cheat_Sheets/Bash-Reference_Sheet.md" + }, + { + "title": "Slurm: Reference Sheet", + "path": "Getting_Started/Cheat_Sheets/Slurm-Reference_Sheet.md" + }, + { + "title": "Creating an Account", + "path": "Getting_Started/Creating_an_Account.md" + }, + { + "title": "Weekly Online Office Hours", + "path": "Getting_Started/Weekly_Online_Office_Hours.md" + }, + { + "title": "Account Requests for non-Tuakiri Members", + "path": "Policy/Account_Requests_for_non_Tuakiri_Members.md" + }, + { + "title": "Bash Shell", + "path": "Tutorials/Introduction_To_HPC/Bash_Shell.md" + }, + { + "title": "Parallel", + "path": "Tutorials/Introduction_To_HPC/Parallel.md" + }, + { + "title": "Resources", + "path": "Tutorials/Introduction_To_HPC/Resources.md" + }, + { + "title": "Scaling", + "path": "Tutorials/Introduction_To_HPC/Scaling.md" + }, + { + "title": "Submitting Your First Job", + "path": "Tutorials/Introduction_To_HPC/Submitting_Your_First_Job.md" + }, + { + "title": "What is an HPC", + "path": "Tutorials/Introduction_To_HPC/What_is_an_HPC.md" + } + ], + "multiplexer": [ + { + "title": "X11", + "path": "Getting_Started/Accessing_the_HPCs/X11.md" + }, + { + "title": "tmux: Reference sheet", + "path": "Getting_Started/Cheat_Sheets/tmux-Reference_sheet.md" + } + ], + "consultancy": [ + { + "title": "Consultancy", + "path": "Getting_Started/Consultancy.md" + } + ], + "database": [ + { + "title": "Databases", + "path": "Storage/Databases.md" + } + ], + "cloud": [ + { + "title": "User Guides", + "path": "Service_Subscriptions/Research_Developer_Cloud/User_Guides.md" + } + ] +} \ No newline at end of file diff --git a/docs/assets/tags.yml b/docs/assets/tags.yml new file mode 100644 index 000000000..94f4f9b77 --- /dev/null +++ b/docs/assets/tags.yml @@ -0,0 +1,167 @@ +# Canonical tag vocabulary. +# Each key is the canonical tag name (used in tag-index.json and MkDocs). +# 'display' is the human-readable label shown in the UI. +# 'aliases' are alternative spellings found in frontmatter that map to this tag. + +slurm: + display: Slurm + aliases: [Slurm, scheduler, scheduling, array, Array, Queing, email] + # 'Queing' is a typo found in the wild; 'array' = job arrays; 'email' = Slurm job notifications + +gpu: + display: GPU + aliases: [GPU, gpgpu] + +mpi: + display: MPI + aliases: [MPI] + +openmp: + display: OpenMP + aliases: [omp, SMT, multithreading, hyper-threading, hyperthreading, simultaneous] + +machine_learning: + display: Machine Learning + aliases: [ml, ai, Machine Learning, machine learning, AI, llm] + +python: + display: Python + aliases: [Python, conda, anaconda, mamba, miniconda, ipython] + +containers: + display: Containers + aliases: [container, apptainer, docker, image, portable, reproducibility] + +storage: + display: Storage + aliases: [data storage, nobackup, localscratch, tmp, tmpdir, temp, freezer, Freezer, autocleaning] + +file_transfer: + display: File Transfer + aliases: [file transfer, data transfer, globus, globus subscription, winscp, filesender, s3cmd, sharing, share, secure] + +interactive: + display: Interactive Computing + aliases: [interactive, jupyter, JupyterHub, JupyterLab, notebook, lab, ipython, rstudio, ondemand, OnDemand, ood, Marimo, Pluto] + +software: + display: Software + aliases: [software, module, lmod, versions, environments, toolchain, install] + +version_control: + display: Version Control + aliases: [version control, git, github, gitlab, gitbash, gitea, bitbucket, repository] + +access: + display: Access + aliases: [access, ssh, login, mfa, MFA, identity, tuakiri, token, windows, wsl, putty, mobaxterm, terminal, x11, bash] + +profiling: + display: Profiling + aliases: [profiling, scaling, perf] + +chemistry: + display: Chemistry + aliases: [chemistry, Computational Chemistry, Density Functional Theory, QMMM, molecular dynamics, Molecular Dynamics] + +biology: + display: Biology + aliases: [biology, bio] + +engineering: + display: Engineering + aliases: [engineering, fea, cae, multiphysics] + +earth_science: + display: Earth Science + aliases: [earth_science, geo, climate, earthquake, climate_science, hydrodynamics, morphodynamics, wave modelling, water quality testing, cfd, particle modelling, modelling] + +mathematics: + display: Mathematics + aliases: [mathematics, math] + +visualisation: + display: Visualisation + aliases: [visualisation, visualization] + +workflow: + display: Workflow + aliases: [workflow, workflow_management] + +parallel: + display: Parallel Computing + aliases: [parallel] + +account: + display: Account & Allocations + aliases: [account, accounting, allocations, allocation, Allocations, project, projects, mynesi, request_membership] + +announcement: + display: Announcement + aliases: [announcement, info, digest, holidays, easter, refresh] + +release_notes: + display: Release Notes + aliases: [release notes, releasenote, hpc3] + +troubleshooting: + display: Troubleshooting + aliases: [troubleshooting, faq, help, corefile, busy, disk quota exceeded, long wait time, Long queue time] + +ide: + display: IDE + aliases: [ide, vscode, VSCode] + +r: + display: R + aliases: [R, rstudio] + +julia: + display: Julia + aliases: [Julia] + +checksum: + display: Checksum + aliases: [checksum, hash, md5, sha] + +fairshare: + display: Fair Share + aliases: [Fair Share, Fairshare, fairshare, Job priority] + +tutorial: + display: Tutorial + aliases: [tutorial, howto, intro, onboarding, cheat sheet] + +multiplexer: + display: Terminal Multiplexer + aliases: [multiplexer, tmux, screen, zellij] + +consultancy: + display: Consultancy + aliases: [consultancy] + +database: + display: Database + aliases: [database] + +cloud: + display: Cloud + aliases: [cloud, rdc, VM] + # Research Developer Cloud and virtual machine content. + +# ----------------------------------------------------------------------------- +# RETIRED TAGS — not added to vocabulary; produce a warning if used. +# Remove these from page frontmatter or replace with a canonical tag above. +# ----------------------------------------------------------------------------- +# compute / Compute — too generic; use slurm or parallel +# general — too generic; remove from pages +# language — too generic; remove from pages +# tips — too generic; remove from pages +# sinfo — too specific (one command); remove from pages +# view — too generic; remove from pages +# hpc — too generic; remove from pages +# tqp — internal NeSI term; remove from pages +# locate / find — too specific; remove from pages +# config — too generic; remove from pages +# no_toc / no_lic / no_desc / no_ver — internal template flags, NOT tags. +# Move these to a separate 'flags' frontmatter key or MkDocs 'hide' config. diff --git a/macro_hooks.py b/macro_hooks.py index ae97fcbb4..73d2d8f57 100644 --- a/macro_hooks.py +++ b/macro_hooks.py @@ -9,6 +9,7 @@ import json module_list_path = os.getenv("MODULE_LIST_PATH", "docs/assets/module-list.json") +tag_index_path = os.getenv("TAG_INDEX_PATH", "docs/assets/tag-index.json") def define_env(env): @@ -21,5 +22,17 @@ def define_env(env): used to perform a transformation """ - # add to the dictionary of variables available to markdown pages: env.variables.applications = json.load(open(module_list_path)) + tag_index = json.load(open(tag_index_path)) + + @env.macro + def pages_with_tag(tag): + entries = tag_index.get(tag.lower(), []) + try: + current_dir = os.path.dirname(env.page.file.src_path) + except AttributeError: + return entries + return [ + {"title": e["title"], "path": os.path.relpath(e["path"], current_dir)} + for e in entries + ] diff --git a/mkdocs.yml b/mkdocs.yml index 2c6284038..8ebce3a70 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -113,7 +113,7 @@ plugins: filename: .pages.yml # - git-authors - tags: - tags: false # This will keep tags for the purpose of indexing, but not display on page. + tags: true # This will keep tags for the purpose of indexing, but not display on page. - git-revision-date-localized: enable_creation_date: false - macros: