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Copy pathCHIP_example_data_table.txt
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executable file
·21 lines (21 loc) · 4.49 KB
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FILE_PATH UNIQUE_ID GENOME NAME BACKGROUND ENRICHED_REGION ENRICHED_MACS COLOR FASTQ_FILE
/storage/cylin/grail/projects/proving_ground/bams/ 20160207_broadchor1_H3K27ac hg19 PRIMARY_ML2738_H3K27AC PRIMARY_ML2738_input PRIMARY_ML2738_H3K27AC_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160207-broadchor1-H3K27Ac-ML2738_S2_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160207_broadchor1_inp hg19 PRIMARY_ML2738_input NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160207-broadchor1-input-ML2738_S1_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160305_194A1_H3K27ac hg19 PRIMARY_ML2811_H3K27AC_A PRIMARY_ML2811_input_A PRIMARY_ML2811_H3K27AC_A_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160305-194A1-H3K27Ac-ML2811_S4_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160305_broadchor2_H3K27ac hg19 PRIMARY_ML2811_H3K27AC_B PRIMARY_ML2811_input_B PRIMARY_ML2811_H3K27AC_B_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160305-broadchor2-H3K27Ac-ML2811_S2_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160305_194A1_inp hg19 PRIMARY_ML2811_input_A NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160305-194A1-input-ML2811_S3_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160305_broadchor2_inp hg19 PRIMARY_ML2811_input_B NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160305-broadchor2-input-ML2811_S1_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160417_142A2A4_H3K27ac hg19 PRIMARY_ML2961_H3K27AC PRIMARY_ML2961_input PRIMARY_ML2961_H3K27AC_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160417-142A2A4-H3K27Ac-ML2961_S8_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160417_142A2A4_inp hg19 PRIMARY_ML2961_input NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160417-142A2A4-input-ML2961_S7_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160426_A269A1_H3K27ac hg19 PRIMARY_ML2991_H3K27AC PRIMARY_ML2991_input PRIMARY_ML2991_H3K27AC_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160426-A269A1-H3K27Ac-ML2991_S8_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160426_A269A1_inp hg19 PRIMARY_ML2991_input NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160426-A269A1-input-ML2991_S7_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160510_142A2_H3K27ac hg19 PRIMARY_ML3040_H3K27AC PRIMARY_ML3040_input PRIMARY_ML3040_H3K27AC_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160510-142A2-H3K27Ac-ML3040_S4_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160510_142A2_inp hg19 PRIMARY_ML3040_input NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160510-142A2-input-ML3040_S3_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160707_243A2_H3K27ac hg19 PRIMARY_ML3218_H3K27AC PRIMARY_ML3218_input PRIMARY_ML3218_H3K27AC_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160707-243A2-H3K27Ac-ML3218_S6_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160707_243A2_inp hg19 PRIMARY_ML3218_input NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160707-243A2-input-ML3218_S5_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160708_269A7_H3K27ac hg19 PRIMARY_ML3219_H3K27AC_A PRIMARY_ML3219_input_A PRIMARY_ML3219_H3K27AC_A_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160708-269A7-H3K27Ac-ML3219_S2_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160708_32216_H3K27ac hg19 PRIMARY_ML3219_H3K27AC_B PRIMARY_ML3219_input_B PRIMARY_ML3219_H3K27AC_B_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160708-32216-H3K27Ac-ML3219_S6_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160708_4616_H3K27ac hg19 PRIMARY_ML3219_H3K27AC_C PRIMARY_ML3219_input_C PRIMARY_ML3219_H3K27AC_C_peaks.bed 0,0,0 /storage/cylin/grail/data/chordoma/20160708-4616-H3K27Ac-ML3219_S4_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160708_269A7_inp hg19 PRIMARY_ML3219_input_A NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160708-269A7-input-ML3219_S1_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160708_32216_inp hg19 PRIMARY_ML3219_input_B NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160708-32216-input-ML3219_S5_R1_001.fastq.gz
/storage/cylin/grail/projects/proving_ground/bams/ 20160708_4616_inp hg19 PRIMARY_ML3219_input_C NONE NONE 0,0,0 /storage/cylin/grail/data/chordoma/20160708-4616-input-ML3219_S3_R1_001.fastq.gz