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This repository was archived by the owner on Mar 20, 2020. It is now read-only.
This repository was archived by the owner on Mar 20, 2020. It is now read-only.

Converting HaploBlocker to use NodeTraversals #26

Description

@josiahseaman

Currently, we have a working Database that supports ZoomLevels and we have a HaploBlocker algorithm that could produce ZoomLevels. However, the HaploBlocker implementation doesn't use the same objects and it hasn't been tested on non-linear graphs yet.

  • Object references changed
  • Object construction updated to NodeTraversal.objects.create()
  • Iterating over "all nodes" handled in a reasonable consistent order
  • Testing for non-linear test cases where summarization could trip over itself.

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