Clippy should be default peak caller, but users should be able to choose between paralcu, clippy and icount at run time - similar to how they can choose the specific genome version they want to use. choice of peak caller impacts downstream outputs that depend on peak calling, namely peka.
Clippy should be default peak caller, but users should be able to choose between paralcu, clippy and icount at run time - similar to how they can choose the specific genome version they want to use. choice of peak caller impacts downstream outputs that depend on peak calling, namely peka.