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Copy pathdata.py
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178 lines (157 loc) · 6.82 KB
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import torch
import pandas as pd
import os
from functools import lru_cache
@lru_cache(5)
def load_chunked(material="78",setnumber=1,chunck=1):
file_path=f"{material}/{material}_{setnumber}_B_{chunck}.csv"
# print("searching", file_path)
if os.path.exists(file_path):
dataB=pd.read_csv(f"{material}/{material}_{setnumber}_B_{chunck}.csv",header=None)
dataH=pd.read_csv(f"{material}/{material}_{setnumber}_H_{chunck}.csv",header=None)
dataT=pd.read_csv(f"{material}/{material}_{setnumber}_T_{chunck}.csv",header=None)
return {"dataB":dataB,"dataH":dataH,"dataT":dataT}
else:
return None
# print(load_chunked('78',1,1))
def collate_fn(batch):
if len(batch[0])==5:
dataB=torch.vstack([item[0] for item in batch if len(item[0])>0])
dataH=torch.vstack([item[1] for item in batch if len(item[0])>0])
dataB_scaler=torch.vstack([item[2] for item in batch if len(item[0])>0])
dataT=torch.vstack([item[3] for item in batch if len(item[0])>0])
dataH_scaler=torch.vstack([item[4] for item in batch if len(item[0])>0])
return dataB,dataH,dataB_scaler,dataT,dataH_scaler
def pandas2tensor(x):
x = x.to_numpy()
py_tensor = torch.from_numpy(x)
py_tensor=py_tensor.to(torch.float32)
return py_tensor.view(-1,len(x))
@lru_cache(maxsize=128)
def load_all(material):
data={}
for i in range(1,8):
chunck=0
end=False
while not end:
if chunck==0:
data[i] = load_chunked(material=material,setnumber=i,chunck=chunck)
chunck+=1
else:
# print("material",material,"i",i,"chunck",chunck)
loaded= load_chunked(material=material,setnumber=i,chunck=chunck)
# print("loaded",loaded)
if loaded is not None:
# print('shapes',type(data[i]['dataB']),type(loaded['dataB']))
data[i]['dataB']= pd.concat([data[i]['dataB'], loaded['dataB']], ignore_index=True)
data[i]['dataH']= pd.concat([data[i]['dataH'], loaded['dataH']], ignore_index=True)
data[i]['dataT']= pd.concat([data[i]['dataT'], loaded['dataT']], ignore_index=True)
chunck=chunck+1
else:
chunck=0
end=True
# print("done with while", end, i)
return data
class MagNetChallange2(torch.utils.data.Dataset):
"""docstring for MagnetChallenge2"""
def __init__(self,material,size=80,skip=10,magnetx=True):
self.material=material
self.maps=load_all(material)
self.inputsize=size+1
self.skip=skip
self.stop_indices=1
self.cumulative={}
self.columns={}
self.rows={}
self.magnetx=magnetx
self.saved=False
self.reset_indices()
self.saved_data=[0 for x in range(self.__len__())]
# print("saved", self.saved_data)
self.set_subset()
print(f"data loaded for {material}")
def group_select(self,i):
if i>max(self.cumulative.values()):
return None
else:
for j in range(8):
if i>=self.cumulative.get(j,0) and i<=self.cumulative.get(j+1,0):
return j+1
def set_subset(self):
self.saved=False
for i in range(self.__len__()):
self.saved_data[i]=self.__getitem__(i)
self.saved=True
def row_select(self,i):
x=self.group_select(i)
stop_indices=self.stop_indices
skip=self.skip
inputsize=self.inputsize
if x is None:
return None
base_x=i-self.cumulative.get(x-1,0) # number of (set points) in current group of points
data_in_a_column=(self.columns[x]) # data in each column in this group
# data available in each column (accounting for stop indices ratio)
data_available_a_column=int(data_in_a_column*stop_indices)
# points in a column accounting for input size and skip multiplier
# skip=0, points would be back to back
points_in_a_column=data_available_a_column//((inputsize*(1+skip)))
row_index=base_x//points_in_a_column
row_index=min(row_index,self.rows[x]-1)
column_base=base_x-row_index*points_in_a_column
start=column_base*(inputsize*(1+skip))
end=start+inputsize
# if (i*100/self.__len__())%10==0:
# print(i,(i*100/self.__len__()),"%","done" )
return x,row_index,start,end
def reset_indices(self):
cumulative={}
columns={}
rows={}
for i in range(1,8):
inputsize=self.inputsize
skip=self.skip
stop_indices=self.stop_indices
x=self.maps[i]['dataB'].shape[0],self.maps[i]['dataB'].shape[1]
cumulative[i]=cumulative.get(i-1,0)+x[0]*(int(x[1]*stop_indices)//(inputsize*(1+skip)))
columns[i]=x[1]
rows[i]=x[0]
self.columns=columns
self.cumulative=cumulative
self.rows=rows
def load(self,loc):
return
def __len__(self):
return max(self.cumulative.values())-2
def __getitem__(self,idx):
if self.saved:
return self.saved_data[idx]
try:
if self.magnetx:
# would format data in format used in tutorial 1
x,row_index,start,end=self.row_select(idx) # currently buggy for index 0, and len(x)
dataB=self.maps[x]['dataB'].iloc[row_index,start:end-1]
dataH=self.maps[x]['dataH'].iloc[row_index,start:end-1]
B_scaler=self.maps[x]['dataB'].iloc[row_index,end-1:end]
H_scaler=self.maps[x]['dataH'].iloc[row_index,end-1:end]
dataT=self.maps[x]['dataT'].iloc[row_index]
# with open('logs.txt',"a") as f:
# out=(pandas2tensor(dataB),pandas2tensor(dataH),pandas2tensor(B_scaler),pandas2tensor(dataT),pandas2tensor(H_scaler))
# out_str=str(idx)+","+",".join([str(xi.shape) for xi in out])
# f.write(out_str+"\n")
return pandas2tensor(dataB),pandas2tensor(dataH),pandas2tensor(B_scaler),pandas2tensor(dataT),pandas2tensor(H_scaler)
else:
# generic data format
x,row_index,start,end=self.row_select(idx)
dataB=self.maps[x]['dataB'].iloc[row_index,start:end]
dataH=self.maps[x]['dataH'].iloc[row_index,start:end]
dataT=self.maps[x]['dataT'].iloc[row_index]
return pandas2tensor(dataB),pandas2tensor(dataH),pandas2tensor(dataT)
except Exception as e:
print(e)
with open("logs.txt",'a') as f:
f.write(f"Error occured {idx}\n")
return None,None,None,None,None
if __name__=="__main__":
data=MagNetChallange2("78")
data[0]