From d14fc4056632da157682f415277b3826517f1fde Mon Sep 17 00:00:00 2001 From: John Didion Date: Fri, 19 Aug 2022 09:03:22 -0700 Subject: [PATCH] Make it clear that `contig_sizes` can have more than two columns (e.g. a faidx) --- indextools/console/split.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/indextools/console/split.py b/indextools/console/split.py index e8a31e3..6c72c69 100644 --- a/indextools/console/split.py +++ b/indextools/console/split.py @@ -49,8 +49,8 @@ def split( output_dir: contig_sizes: A file with the sizes of all the contigs in the index; only necessary if the primary file is not specified, or if it does not - have sequence information in its header. This is a two-column tab-delimited - file ({contig_name}\t{contig_size}). + have sequence information in its header. This is a tab-delimited file + where the first two columns are ({contig_name}\t{contig_size}). """ if slop and len(slop) == 1: slop = slop[0], slop[0]