diff --git a/bkbit/data/ait_output/Human_cluster_info.pkl b/bkbit/data/ait_output/Human_cluster_info.pkl new file mode 100644 index 0000000..1f5bda9 Binary files /dev/null and b/bkbit/data/ait_output/Human_cluster_info.pkl differ diff --git a/bkbit/data/ait_output/Human_taxonomy.csv b/bkbit/data/ait_output/Human_taxonomy.csv new file mode 100644 index 0000000..1874b6f --- /dev/null +++ b/bkbit/data/ait_output/Human_taxonomy.csv @@ -0,0 +1,454 @@ +cell_label,Neighborhood,Class,Subclass,Group,Cluster,cluster_id,cell_type_ontology_term,load_id,donor_id,assay,assay_ontology_term_id,organism,organism_ontology_term_id,development_stage,anatomical_region,anatomical_region_merged,anatomical_region_ontology_term_id,brain_region_ontology_term_id,self_reported_sex,self_reported_sex_ontology_term_id,self_reported_ethnicity,self_reported_ethnicity_ontology_term_id,disease,disease_ontology_term_id,suspension_type,is_primary_data,atac_confidently_mapped_read_pairs,atac_fraction_of_genome_in_peaks,atac_fraction_of_high_quality_fragments_in_cells,atac_fraction_of_high_quality_fragments_overlapping_tss,atac_fraction_of_high_quality_fragments_overlapping_peaks,atac_fraction_of_transposition_events_in_peaks_in_cells,atac_mean_raw_read_pairs_per_cell,atac_median_high_quality_fragments_per_cell,atac_non_nuclear_read_pairs,atac_number_of_peaks,atac_percent_duplicates,atac_q30_bases_in_barcode,atac_q30_bases_in_read_1,atac_q30_bases_in_read_2,atac_q30_bases_in_sample_index_i1,atac_sequenced_read_pairs,atac_tss_enrichment_score,atac_unmapped_read_pairs,atac_valid_barcodes,gex_fraction_of_transcriptomic_reads_in_cells,gex_mean_raw_reads_per_cell,gex_median_umi_counts_per_cell,gex_median_genes_per_cell,gex_percent_duplicates,gex_q30_bases_in_umi,gex_q30_bases_in_barcode,gex_q30_bases_in_read_2,gex_q30_bases_in_sample_index_i1,gex_q30_bases_in_sample_index_i2,gex_reads_mapped_antisense_to_gene,gex_reads_mapped_confidently_to_exonic_regions,gex_reads_mapped_confidently_to_genome,gex_reads_mapped_confidently_to_intergenic_regions,gex_reads_mapped_confidently_to_intronic_regions,gex_reads_mapped_confidently_to_transcriptome,gex_reads_mapped_to_genome,gex_reads_with_tso,gex_sequenced_read_pairs,gex_total_genes_detected,gex_valid_umis,gex_valid_barcodes,total_counts,total_genes,doublet_score,organism_sci,accession_group,embedding_set,CL:ID_group,tokens_group,display_order_group,literature_support,literature_name_short,literature_name_long,curated_markers,color_hex_group,color_group,accession_subclass,CL:ID_subclass,tokens_subclass,display_order_subclass,color_hex_subclass,color_subclass,accession_class,CL:ID_class,tokens_class,display_order_class,color_hex_class,color_class,accession_neighborhood,CL:ID_neighborhood,tokens_neighborhood,display_order_neighborhood,color_hex_neighborhood,color_neighborhood,cell_barcode,barcoded_cell_sample_label,alignment_job_database +AAACAGCCAAATGCCC-2362_A05,Nonneuron,Vascular,VLMC,VLMC,Human-451,Human-451,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,15259,4072,0.027027027027027,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACAGCCAAATGCCC,2362_A05,AIBS +AAACAGCCAATTGAGA-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Human-1,Human-1,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,20645,4351,0.0547945205479452,Homo sapiens,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACAGCCAATTGAGA,2362_A05,AIBS +AAACAGCCAGCATGTC-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-153,Human-153,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,2551,1486,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACAGCCAGCATGTC,2362_A05,AIBS +AAACAGCCATTGTGGC-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-14,Human-14,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8326,3170,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACAGCCATTGTGGC,2362_A05,AIBS +AAACATGCAGTAGGAT-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-159,Human-159,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8609,3133,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACATGCAGTAGGAT,2362_A05,AIBS +AAACCAACAAGGTACG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-154,Human-154,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,34545,7188,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCAACAAGGTACG,2362_A05,AIBS +AAACCAACACAGACTC-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Human-15,Human-15,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,17201,4169,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACCAACACAGACTC,2362_A05,AIBS +AAACCAACATGAAGTA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-563,Human-563,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,68183,8622,0.108108108108108,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCAACATGAAGTA,2362_A05,AIBS +AAACCGCGTAACCACA-2362_A05,Nonneuron,OPC-Oligo,OPC,OPC,Human-191,Human-191,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8738,3276,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACCGCGTAACCACA,2362_A05,AIBS +AAACCGCGTACGTTTC-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-512,Human-512,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,23012,5736,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGCGTACGTTTC,2362_A05,AIBS +AAACCGCGTGATTTGG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-155,Human-155,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,82814,9009,0.0684931506849315,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGCGTGATTTGG,2362_A05,AIBS +AAACCGCGTTGCTTCG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-84,Human-84,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,5151,2528,0.0,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGCGTTGCTTCG,2362_A05,AIBS +AAACCGGCAAATGCCC-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-492,Human-492,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,26953,6150,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCAAATGCCC,2362_A05,AIBS +AAACCGGCAATACTGT-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-22,Human-22,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,94545,9239,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCAATACTGT,2362_A05,AIBS +AAACCGGCACTCGCTC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-541,Human-541,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,96386,9555,0.27027027027027,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCACTCGCTC,2362_A05,AIBS +AAACGCGCACACTAAT-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-83,Human-83,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,27001,6088,0.108108108108108,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGCGCACACTAAT,2362_A05,AIBS +AAACGCGCAGCCTAAC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-564,Human-564,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,58570,7636,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGCGCAGCCTAAC,2362_A05,AIBS +AAACGGATCTGTGAGT-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Human-13,Human-13,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,5815,2325,0.027027027027027,Homo sapiens,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACGGATCTGTGAGT,2362_A05,AIBS +AAACGTACAGGGAGCT-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Human-12,Human-12,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,11715,3662,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAACGTACAGGGAGCT,2362_A05,AIBS +AAACGTACATCCCGCT-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Human-21,Human-21,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,61439,8041,0.0958904109589041,Homo sapiens,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGTACATCCCGCT,2362_A05,AIBS +AAAGCACCAGAACCGA-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-234,Human-234,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,86777,8607,0.162162162162162,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCACCAGAACCGA,2362_A05,AIBS +AAAGCCCGTTAAGGCC-2362_A05,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-475,Human-475,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,9515,3516,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AAAGCCCGTTAAGGCC,2362_A05,AIBS +AAAGCCGCACCTAATG-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-28,Human-28,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,13418,4286,0.027027027027027,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGCCGCACCTAATG,2362_A05,AIBS +AAAGCCGCAGGCAAGC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-337,Human-337,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,66558,8597,0.0684931506849315,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCGCAGGCAAGC,2362_A05,AIBS +AAAGCGGGTCATCATC-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-160,Human-160,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6403,2648,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGCGGGTCATCATC,2362_A05,AIBS +AAAGGTTAGGGACGCA-2362_A05,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-247,Human-247,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,71229,9183,0.328767123287671,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGTTAGGGACGCA,2362_A05,AIBS +AAAGGTTAGGGATGCG-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-5,Human-5,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6802,2679,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGGTTAGGGATGCG,2362_A05,AIBS +AAATGCCTCACAGCCA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-553,Human-553,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,77955,8910,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATGCCTCACAGCCA,2362_A05,AIBS +AAATGCCTCAGGAAGC-2362_A05,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-453,Human-453,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,74342,8763,0.191780821917808,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATGCCTCAGGAAGC,2362_A05,AIBS +AACAAAGGTAAGCACC-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-26,Human-26,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,80432,9052,0.136986301369863,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAAAGGTAAGCACC,2362_A05,AIBS +AACATCATCAACAAGG-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-480,Human-480,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,7018,3086,0.0,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACATCATCAACAAGG,2362_A05,AIBS +AACCCGCAGTCTATGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-513,Human-513,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,82106,8584,0.150684931506849,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCCGCAGTCTATGA,2362_A05,AIBS +AACCGCTCAATATAGG-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-145,Human-145,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,7262,3079,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACCGCTCAATATAGG,2362_A05,AIBS +AACCGCTCACCTGCCT-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-515,Human-515,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,37783,7413,0.150684931506849,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCGCTCACCTGCCT,2362_A05,AIBS +AACCGCTCAGTAAGTA-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-543,Human-543,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,12387,3398,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACCGCTCAGTAAGTA,2362_A05,AIBS +AACCTAATCCTCACAC-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-227,Human-227,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,2794,1690,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACCTAATCCTCACAC,2362_A05,AIBS +AACCTAATCTTAGTGA-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-40,Human-40,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,96449,9284,0.191780821917808,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTAATCTTAGTGA,2362_A05,AIBS +AACCTCACATTATGCG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-8,Human-8,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6708,3030,0.0136986301369863,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTCACATTATGCG,2362_A05,AIBS +AACGACAAGAACCTGT-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-236,Human-236,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,88750,8600,0.0684931506849315,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACGACAAGAACCTGT,2362_A05,AIBS +AACGACAAGCAACATC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-196,Human-196,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,60769,8144,0.178082191780822,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACGACAAGCAACATC,2362_A05,AIBS +AACGACAAGCTGGAAA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-476,Human-476,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,65154,8287,0.10958904109589,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACGACAAGCTGGAAA,2362_A05,AIBS +AACGACAAGTAACAGG-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-244,Human-244,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8194,3402,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACGACAAGTAACAGG,2362_A05,AIBS +AACTGTTCACTAAATC-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-6,Human-6,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8132,2926,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACTGTTCACTAAATC,2362_A05,AIBS +AAGCAAGTCCCGAAGC-2362_A05,Nonneuron,Vascular,Pericyte,Pericyte,Human-278,Human-278,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,4152,1977,0.0,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAGCAAGTCCCGAAGC,2362_A05,AIBS +AAGCAAGTCTTAGCCC-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-208,Human-208,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,91426,9654,0.10958904109589,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCAAGTCTTAGCCC,2362_A05,AIBS +AAGCCTCCAAGTGTCC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-2,Human-2,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,50392,7516,0.108108108108108,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTCCAAGTGTCC,2362_A05,AIBS +AAGCCTTAGCGAGCGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-85,Human-85,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,83792,9187,0.108108108108108,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTTAGCGAGCGA,2362_A05,AIBS +AAGCGAATCAAGACTC-2362_A05,Nonneuron,OPC-Oligo,OPC,OPC,Human-11,Human-11,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,20412,4592,0.0136986301369863,Homo sapiens,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAGCGAATCAAGACTC,2362_A05,AIBS +AAGCGAATCCTAATGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-88,Human-88,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,72421,8740,0.123287671232877,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCGAATCCTAATGA,2362_A05,AIBS +AAGGTCAAGATACTTG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-471,Human-471,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,60925,8029,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGTCAAGATACTTG,2362_A05,AIBS +AAGGTGCAGTCCTTTG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-560,Human-560,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,41958,6941,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGTGCAGTCCTTTG,2362_A05,AIBS +AAGTCTATCTACTAAG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-223,Human-223,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,22411,5778,0.135135135135135,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTCTATCTACTAAG,2362_A05,AIBS +AAGTGCAAGCTGGACC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-339,Human-339,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,75529,8741,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTGCAAGCTGGACC,2362_A05,AIBS +AAGTGTTGTGCACGCA-2362_A05,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-56,Human-56,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,45127,7690,0.191780821917808,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTGTTGTGCACGCA,2362_A05,AIBS +AATAACCGTATTGAGT-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-487,Human-487,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,74514,8238,0.136986301369863,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATAACCGTATTGAGT,2362_A05,AIBS +AATAGAGGTTAAGCGC-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-270,Human-270,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,14690,4092,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATAGAGGTTAAGCGC,2362_A05,AIBS +AATCAGGAGCCTGACA-2362_A05,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Human-310,Human-310,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,27789,5906,0.164383561643836,Homo sapiens,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATCAGGAGCCTGACA,2362_A05,AIBS +AATCCTAAGGACCGCT-2362_A05,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-317,Human-317,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,19344,5486,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATCCTAAGGACCGCT,2362_A05,AIBS +AATCTCAAGACACTTA-2362_A05,Nonneuron,OPC-Oligo,COP,COP,Human-70,Human-70,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,38129,5788,0.0547945205479452,Homo sapiens,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATCTCAAGACACTTA,2362_A05,AIBS +AATGAAGGTAACGGGA-2362_A05,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-463,Human-463,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,34169,6236,0.135135135135135,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATGAAGGTAACGGGA,2362_A05,AIBS +AATGCGCGTAGTTGGC-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-32,Human-32,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,60649,7717,0.10958904109589,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATGCGCGTAGTTGGC,2362_A05,AIBS +AATTAGCGTGAACAAA-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-452,Human-452,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,4919,2357,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATTAGCGTGAACAAA,2362_A05,AIBS +AATTGACGTGTGTCCC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-336,Human-336,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,42180,7543,0.0136986301369863,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGACGTGTGTCCC,2362_A05,AIBS +AATTGCTCAATACTGT-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-490,Human-490,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,27665,5856,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGCTCAATACTGT,2362_A05,AIBS +AATTGCTCAGTACCGT-2362_A05,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Human-521_1,Human-521_1,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6171,2751,0.0,Homo sapiens,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGCTCAGTACCGT,2362_A05,AIBS +AATTGGACAACACCTA-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-34,Human-34,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,5012,2659,0.0,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGGACAACACCTA,2362_A05,AIBS +AATTTCCTCACTTCAT-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-9,Human-9,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,17045,5152,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTTCCTCACTTCAT,2362_A05,AIBS +AATTTGCCATAGCGGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-35,Human-35,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,95600,9464,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTTGCCATAGCGGA,2362_A05,AIBS +ACAACACTCGTGCCTT-2362_A05,Nonneuron,Vascular,Endo,Endo,Human-323,Human-323,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,22443,4168,0.0,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACAACACTCGTGCCTT,2362_A05,AIBS +ACAGGAATCGTTAACA-2362_A05,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-65,Human-65,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,52969,7897,0.164383561643836,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGGAATCGTTAACA,2362_A05,AIBS +ACATTAGTCGAAGTGA-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-449,Human-449,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,4949,2352,0.027027027027027,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACATTAGTCGAAGTGA,2362_A05,AIBS +ACCAAGCGTTTGAGCA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-199,Human-199,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,89124,8657,0.219178082191781,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAAGCGTTTGAGCA,2362_A05,AIBS +ACCAATATCCTGGCTT-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-18,Human-18,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,69772,8521,0.0958904109589041,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAATATCCTGGCTT,2362_A05,AIBS +ACCCTGTTCGAAGCGG-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-497,Human-497,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,64892,7487,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCTGTTCGAAGCGG,2362_A05,AIBS +ACCGAAGCAGTGAACG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-30,Human-30,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,68324,8846,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCGAAGCAGTGAACG,2362_A05,AIBS +ACCTAAGGTTCTTTAG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-24,Human-24,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,97298,9557,0.216216216216216,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTAAGGTTCTTTAG,2362_A05,AIBS +ACCTACCTCGTTAGCG-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-201,Human-201,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,87072,9499,0.273972602739726,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTACCTCGTTAGCG,2362_A05,AIBS +ACGAATCTCCTCCTAA-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-484,Human-484,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,86484,8636,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGAATCTCCTCCTAA,2362_A05,AIBS +ACGACAAAGAGCAAGC-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-483,Human-483,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,28832,6222,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGACAAAGAGCAAGC,2362_A05,AIBS +ACGGTTTAGGCGGATG-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-485,Human-485,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,2580,1577,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACGGTTTAGGCGGATG,2362_A05,AIBS +ACTAATCCACTAAGCC-2362_A05,Nonneuron,Immune,Macrophage,BAM,Human-68,Human-68,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,10003,3639,0.0,Homo sapiens,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACTAATCCACTAAGCC,2362_A05,AIBS +ACTCACCTCCTGGTGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-86,Human-86,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,94940,9416,0.232876712328767,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTCACCTCCTGGTGA,2362_A05,AIBS +ACTCCTCAGCACAGAA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-189,Human-189,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,55962,7742,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTCCTCAGCACAGAA,2362_A05,AIBS +ACTCGCGCAGTTGCGT-2362_A05,Nonneuron,Immune,Lymphocyte,T cells,Human-81,Human-81,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,2599,1525,0.0,Homo sapiens,CS20250428_GROUP_0059,Nonneuron,CL:0000084,T cells,6,Yao et al. 2023,,,"CD247, ITK",#f3b79b,,CS20250428_SUBCL_0015,CL:0000542,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACTCGCGCAGTTGCGT,2362_A05,AIBS +ACTGAAACAACGTGCT-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-561,Human-561,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,74199,8931,0.0136986301369863,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTGAAACAACGTGCT,2362_A05,AIBS +AGAAACCCACCAAAGG-2362_A05,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-20,Human-20,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,23168,5707,0.315068493150685,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AGAAACCCACCAAAGG,2362_A05,AIBS +AGAATCTGTACCAGGT-2362_A05,Nonneuron,Immune,Lymphocyte,B cells,Human-69,Human-69,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,3000,1523,0.0,Homo sapiens,CS20250428_GROUP_0000,Nonneuron,,B cells,7,,,,,#21eef1,,CS20250428_SUBCL_0015,,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AGAATCTGTACCAGGT,2362_A05,AIBS +AGCACTTAGCACAGAA-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-232,Human-232,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6154,2794,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGCACTTAGCACAGAA,2362_A05,AIBS +AGCACTTAGGCTAAGA-2362_A05,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-460,Human-460,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,30786,6124,0.108108108108108,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCACTTAGGCTAAGA,2362_A05,AIBS +AGCCAGTGTTCCTCCT-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-25,Human-25,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,57491,8285,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCCAGTGTTCCTCCT,2362_A05,AIBS +AGCTACTAGGCGCACT-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-472,Human-472,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,7598,3355,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGCTACTAGGCGCACT,2362_A05,AIBS +AGCTGCTCAAGCTACC-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-42,Human-42,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,80676,8976,0.205479452054795,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTGCTCAAGCTACC,2362_A05,AIBS +AGGAAACGTTAGCCAA-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-238,Human-238,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,24895,5712,0.178082191780822,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGAAACGTTAGCCAA,2362_A05,AIBS +AGGATCCGTTGCAGTA-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-448,Human-448,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8631,3214,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGATCCGTTGCAGTA,2362_A05,AIBS +AGGATGCAGCATGACT-2362_A05,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Human-345,Human-345,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,84942,8852,0.232876712328767,Homo sapiens,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGATGCAGCATGACT,2362_A05,AIBS +AGGATGCAGGTTAGCT-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-150,Human-150,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,10806,3881,0.0136986301369863,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGATGCAGGTTAGCT,2362_A05,AIBS +AGGTCATTCGAAGTGA-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-44,Human-44,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,52200,7654,0.205479452054795,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTCATTCGAAGTGA,2362_A05,AIBS +AGGTTAGAGAGGAGGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-342,Human-342,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,48840,7939,0.136986301369863,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTTAGAGAGGAGGA,2362_A05,AIBS +AGGTTAGAGGTCCGTA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-433,Human-433,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,33776,7031,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTTAGAGGTCCGTA,2362_A05,AIBS +AGTAACGAGGAAGCTA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-190,Human-190,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,95043,9695,0.26027397260274,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTAACGAGGAAGCTA,2362_A05,AIBS +AGTAAGTAGCACCACA-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-231,Human-231,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8637,3463,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGTAAGTAGCACCACA,2362_A05,AIBS +AGTGATGAGGCTTAGT-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-217,Human-217,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,32790,6918,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTGATGAGGCTTAGT,2362_A05,AIBS +AGTTACATCGCATTAA-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-33,Human-33,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,18232,5013,0.0273972602739726,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTTACATCGCATTAA,2362_A05,AIBS +ATAACGACACCAAAGG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-219,Human-219,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,92042,9354,0.136986301369863,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATAACGACACCAAAGG,2362_A05,AIBS +ATACCTGCAGGATAAC-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-39,Human-39,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,87012,8895,0.219178082191781,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATACCTGCAGGATAAC,2362_A05,AIBS +ATATGCATCTTTAAGG-2362_A05,Nonneuron,OPC-Oligo,OPC,OPC,Human-188,Human-188,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,45849,6654,0.150684931506849,Homo sapiens,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATATGCATCTTTAAGG,2362_A05,AIBS +ATATGTCCATTGCAGC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-555,Human-555,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,99312,8780,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATGTCCATTGCAGC,2362_A05,AIBS +ATCACTAAGCACTAAC-2362_A05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-355,Human-355,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,60738,8124,0.178082191780822,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCACTAAGCACTAAC,2362_A05,AIBS +ATCACTAAGTTAGTTG-2362_A05,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-163,Human-163,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,76339,8923,0.135135135135135,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCACTAAGTTAGTTG,2362_A05,AIBS +ATCAGGTTCACCTGCT-2362_A05,Nonneuron,Immune,Macrophage,BAM,Human-74,Human-74,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,9257,3164,0.0,Homo sapiens,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATCAGGTTCACCTGCT,2362_A05,AIBS +ATCCTCATCGCTAGCA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-218,Human-218,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,40181,6901,0.0958904109589041,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCCTCATCGCTAGCA,2362_A05,AIBS +ATGCAGGCACAACAAA-2362_A05,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Human-109,Human-109,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,27111,5365,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGCAGGCACAACAAA,2362_A05,AIBS +ATGCATTCAATATACC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-332,Human-332,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,57453,7710,0.136986301369863,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGCATTCAATATACC,2362_A05,AIBS +ATGGCTGTCAATAGCC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-562,Human-562,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,24713,5664,0.0547945205479452,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGGCTGTCAATAGCC,2362_A05,AIBS +ATGGTGCGTGGAAGGC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-559,Human-559,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,80944,9089,0.0547945205479452,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGGTGCGTGGAAGGC,2362_A05,AIBS +ATGTAAGCAAAGCTCC-2362_A05,Nonneuron,Vascular,Endo,Endo,Human-77,Human-77,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6832,2537,0.027027027027027,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGTAAGCAAAGCTCC,2362_A05,AIBS +ATTACGTCAAGCTTAT-2362_A05,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-379,Human-379,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,3921,2094,0.0,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATTACGTCAAGCTTAT,2362_A05,AIBS +ATTAGCTCATTATGCG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-510,Human-510,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6482,3017,0.0,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTAGCTCATTATGCG,2362_A05,AIBS +ATTAGTCCATTGTGGC-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-245,Human-245,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,96975,8793,0.123287671232877,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTAGTCCATTGTGGC,2362_A05,AIBS +ATTCAACCATTGTGGC-2362_A05,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Human-350,Human-350,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,45810,7370,0.164383561643836,Homo sapiens,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCAACCATTGTGGC,2362_A05,AIBS +ATTCCGGAGGGATGCG-2362_A05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-368,Human-368,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,9111,3481,0.0,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCCGGAGGGATGCG,2362_A05,AIBS +CAATCGCCAGCCAGAA-2362_A05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-351,Human-351,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,16485,4875,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAATCGCCAGCCAGAA,2362_A05,AIBS +CAATGCCCAATTAGCT-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-260,Human-260,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,92143,9365,0.205479452054795,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAATGCCCAATTAGCT,2362_A05,AIBS +CACTAAGGTCATGCCC-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-7,Human-7,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,32868,5699,0.027027027027027,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CACTAAGGTCATGCCC,2362_A05,AIBS +CACTTAAAGAACAAGT-2362_A05,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-465,Human-465,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,69017,8645,0.164383561643836,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACTTAAAGAACAAGT,2362_A05,AIBS +CAGGCTGGTGCTTAGA-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-280,Human-280,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6410,2516,0.0,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGGCTGGTGCTTAGA,2362_A05,AIBS +CAGGTCCAGTTAGAGG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-340,Human-340,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,70238,8570,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAGGTCCAGTTAGAGG,2362_A05,AIBS +CCGGTTAAGCAACAAG-2362_A05,Nonneuron,Vascular,Endo,Endo,Human-78,Human-78,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,10476,3120,0.027027027027027,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCGGTTAAGCAACAAG,2362_A05,AIBS +CCTAAATCAATTTGGT-2362_A05,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Human-276,Human-276,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,27088,5928,0.108108108108108,Homo sapiens,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTAAATCAATTTGGT,2362_A05,AIBS +CCTGATGAGGTCCGTA-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-157,Human-157,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,45743,7678,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTGATGAGGTCCGTA,2362_A05,AIBS +CCTTAACGTGATGAGG-2362_A05,Nonneuron,Vascular,SMC,SMC,Human-43,Human-43,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,5042,2203,0.0,Homo sapiens,CS20250428_GROUP_0028,Nonneuron,CL:0000192,SMC,16,Yao et al. 2023,,,ACTA2,#177242,,CS20250428_SUBCL_0024,CL:0000192,SMC,12,#ab0c8d,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCTTAACGTGATGAGG,2362_A05,AIBS +CGAGTCGGTGATGAGG-2362_A05,Nonneuron,Immune,Macrophage,BAM,Human-71,Human-71,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,4265,2261,0.0,Homo sapiens,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGAGTCGGTGATGAGG,2362_A05,AIBS +CGGGACAAGAGAGGAG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-23,Human-23,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,18435,5765,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGGACAAGAGAGGAG,2362_A05,AIBS +CGTCAATAGGTGCTGC-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-235,Human-235,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,18172,4674,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTCAATAGGTGCTGC,2362_A05,AIBS +CGTGAGGAGTTATTCC-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-170,Human-170,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,59865,8255,0.189189189189189,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTGAGGAGTTATTCC,2362_A05,AIBS +CGTGTGTCATAGACTT-2362_A05,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-249,Human-249,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8265,3516,0.0,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTGTGTCATAGACTT,2362_A05,AIBS +CGTTAGGTCTTTGACT-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-102,Human-102,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,82812,8579,0.136986301369863,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTTAGGTCTTTGACT,2362_A05,AIBS +CTAAGTCAGTGTGATC-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-169,Human-169,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,53790,8027,0.0410958904109589,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAAGTCAGTGTGATC,2362_A05,AIBS +CTAGCGGGTTCGGGAT-2362_A05,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-314,Human-314,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,40548,7771,0.246575342465753,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAGCGGGTTCGGGAT,2362_A05,AIBS +CTATGAGGTTTGAGCA-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-258,Human-258,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,40927,7408,0.178082191780822,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTATGAGGTTTGAGCA,2362_A05,AIBS +CTCACACTCACCGGTA-2362_A05,Nonneuron,Immune,Monocyte,Monocyte,Human-72,Human-72,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,10991,3008,0.0,Homo sapiens,CS20250428_GROUP_0022,Nonneuron,,Monocyte,8,Yao et al. 2023,,,,#48e6b4,,CS20250428_SUBCL_0038,CL:0000542,Monocyte,6,#91132c,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTCACACTCACCGGTA,2362_A05,AIBS +CTCCTCACAGGGAGGA-2362_A05,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-461,Human-461,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,26900,5602,0.135135135135135,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCCTCACAGGGAGGA,2362_A05,AIBS +CTCGCTAGTTGTTGGA-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-268,Human-268,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8731,3547,0.0,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTCGCTAGTTGTTGGA,2362_A05,AIBS +CTGATCACAAACTGTT-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-516,Human-516,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,16959,4878,0.0958904109589041,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGATCACAAACTGTT,2362_A05,AIBS +CTGGCTTTCATGGCCA-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-53,Human-53,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6620,2898,0.0,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTGGCTTTCATGGCCA,2362_A05,AIBS +CTGGTAAGTAACCAGC-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-537,Human-537,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,91090,9321,0.27027027027027,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGGTAAGTAACCAGC,2362_A05,AIBS +CTGTTGGAGCCGGTAC-2362_A05,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-297,Human-297,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8870,3741,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGTTGGAGCCGGTAC,2362_A05,AIBS +CTTTGAGCAGGCCAAA-2362_A05,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-241,Human-241,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,46496,8051,0.123287671232877,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTTGAGCAGGCCAAA,2362_A05,AIBS +GAACCTGTCCACCCTG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-165,Human-165,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,20004,5132,0.0684931506849315,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAACCTGTCCACCCTG,2362_A05,AIBS +GAGGTACAGACAAACG-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-477,Human-477,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,43243,7354,0.108108108108108,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGGTACAGACAAACG,2362_A05,AIBS +GATAAAGGTTCGGGAT-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-266,Human-266,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,46090,8256,0.191780821917808,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATAAAGGTTCGGGAT,2362_A05,AIBS +GATCAGGCACAATGCC-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-149,Human-149,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,8739,3340,0.0136986301369863,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATCAGGCACAATGCC,2362_A05,AIBS +GATGCAGCAAGGTCGA-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-239,Human-239,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,75476,8707,0.324324324324324,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATGCAGCAAGGTCGA,2362_A05,AIBS +GCACCTAAGCACAGCC-2362_A05,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-284,Human-284,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,11622,4186,0.0,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCACCTAAGCACAGCC,2362_A05,AIBS +GCAGGAAGTTTGAGGC-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-200,Human-200,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,74554,9039,0.123287671232877,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAGGAAGTTTGAGGC,2362_A05,AIBS +GCATGAAAGGTCAAAG-2362_A05,Nonneuron,Immune,Lymphocyte,T cells,Human-79,Human-79,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,3710,1745,0.0,Homo sapiens,CS20250428_GROUP_0059,Nonneuron,CL:0000084,T cells,6,Yao et al. 2023,,,"CD247, ITK",#f3b79b,,CS20250428_SUBCL_0015,CL:0000542,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCATGAAAGGTCAAAG,2362_A05,AIBS +GCCACACAGAGAGCCG-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-263,Human-263,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,25495,6010,0.136986301369863,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCACACAGAGAGCCG,2362_A05,AIBS +GCCTCAAAGGAGGGTT-2362_A05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-361,Human-361,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,35221,6202,0.135135135135135,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCTCAAAGGAGGGTT,2362_A05,AIBS +GCGATTAGTTAAGCCA-2362_A05,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Human-305,Human-305,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,48326,7108,0.108108108108108,Homo sapiens,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGATTAGTTAAGCCA,2362_A05,AIBS +GCTCATTGTTTGGTTC-2362_A05,Nonneuron,Immune,Macrophage,BAM,Human-75,Human-75,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,9983,3321,0.0,Homo sapiens,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCTCATTGTTTGGTTC,2362_A05,AIBS +GGAACGGTCAAGTGAG-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-105,Human-105,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,4070,2209,0.0,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGAACGGTCAAGTGAG,2362_A05,AIBS +GGAATCTTCTAATCAG-2362_A05,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-164,Human-164,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,86324,9040,0.191780821917808,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGAATCTTCTAATCAG,2362_A05,AIBS +GGCCGTTAGGACGTAA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-333,Human-333,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,41985,7530,0.0547945205479452,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCCGTTAGGACGTAA,2362_A05,AIBS +GGTCCGTAGTAACCAC-2362_A05,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-55,Human-55,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,51108,7830,0.178082191780822,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTCCGTAGTAACCAC,2362_A05,AIBS +GGTTTAATCCGGTATG-2362_A05,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-222,Human-222,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,30143,6361,0.123287671232877,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTTAATCCGGTATG,2362_A05,AIBS +GTTAGGCGTAGCTAGC-2362_A05,Nonneuron,Immune,Lymphocyte,T cells,Human-80,Human-80,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,2357,1582,0.0,Homo sapiens,CS20250428_GROUP_0059,Nonneuron,CL:0000084,T cells,6,Yao et al. 2023,,,"CD247, ITK",#f3b79b,,CS20250428_SUBCL_0015,CL:0000542,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTAGGCGTAGCTAGC,2362_A05,AIBS +TACCCGGCATTAAACC-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-187,Human-187,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,6762,2716,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACCCGGCATTAAACC,2362_A05,AIBS +TACCTTAGTTGCGCGA-2362_A05,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-456,Human-456,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,66696,8348,0.27027027027027,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCTTAGTTGCGCGA,2362_A05,AIBS +TACGGATTCGTTAAGC-2362_A05,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-253,Human-253,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,18857,5610,0.0,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACGGATTCGTTAAGC,2362_A05,AIBS +TAGCGGCTCAGCCAAT-2362_A05,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-320,Human-320,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,59526,8198,0.0958904109589041,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCGGCTCAGCCAAT,2362_A05,AIBS +TAGCTAGGTACGGGTT-2362_A05,Nonneuron,Vascular,Pericyte,Pericyte,Human-45,Human-45,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,3192,1682,0.0,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAGCTAGGTACGGGTT,2362_A05,AIBS +TAGGAACCATAATCGT-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-335,Human-335,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,68955,7834,0.189189189189189,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGAACCATAATCGT,2362_A05,AIBS +TAGGAGTCACCAGGTT-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-547,Human-547,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,93865,9177,0.123287671232877,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGAGTCACCAGGTT,2362_A05,AIBS +TAGTGAGAGATAGACG-2362_A05,Nonneuron,OPC-Oligo,OPC,OPC,Human-182,Human-182,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,9686,3308,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAGTGAGAGATAGACG,2362_A05,AIBS +TCACCGGCAGGCTTCG-2362_A05,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-450,Human-450,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,5055,2413,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCACCGGCAGGCTTCG,2362_A05,AIBS +TCCGGTTTCCCTGGTT-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Human-204,Human-204,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,33731,6438,0.10958904109589,Homo sapiens,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCGGTTTCCCTGGTT,2362_A05,AIBS +TCTTCAAGTAAGGTCC-2362_A05,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-61,Human-61,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,18931,5339,0.108108108108108,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTTCAAGTAAGGTCC,2362_A05,AIBS +TGATTCAAGCCTGTGA-2362_A05,Nonneuron,Vascular,Endo,Endo,Human-76,Human-76,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,4121,2360,0.0,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGATTCAAGCCTGTGA,2362_A05,AIBS +TGCAAGCGTATGGTGC-2362_A05,Nonneuron,Immune,Microglia,Microglia,Human-486,Human-486,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,17197,4850,0.324324324324324,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGCAAGCGTATGGTGC,2362_A05,AIBS +TGCACTTGTTCAAGAT-2362_A05,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-47,Human-47,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,10784,3897,0.027027027027027,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGCACTTGTTCAAGAT,2362_A05,AIBS +TGGCTAAGTTCCGCAC-2362_A05,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Human-519,Human-519,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,80744,8128,0.164383561643836,Homo sapiens,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGCTAAGTTCCGCAC,2362_A05,AIBS +TGTCAGTAGCCGCTAA-2362_A05,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Human-206,Human-206,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,15164,4715,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTCAGTAGCCGCTAA,2362_A05,AIBS +TGTCATAAGCGATAAG-2362_A05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-348,Human-348,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,45804,7160,0.136986301369863,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTCATAAGCGATAAG,2362_A05,AIBS +TTAAAGGCAGTCTATG-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-405,Human-405,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,49928,7176,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAAAGGCAGTCTATG,2362_A05,AIBS +TTCAACCGTTAGCTGA-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-334,Human-334,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,21825,5089,0.0547945205479452,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTCAACCGTTAGCTGA,2362_A05,AIBS +TTGTGCCTCCGCAACA-2362_A05,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Human-311,Human-311,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,66030,8285,0.123287671232877,Homo sapiens,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGTGCCTCCGCAACA,2362_A05,AIBS +TTTCACCCAATAATGG-2362_A05,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-104,Human-104,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,57110,7780,0.136986301369863,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTCACCCAATAATGG,2362_A05,AIBS +TTTGACCGTCAACAAT-2362_A05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-384,Human-384,CL:0000003,2362_A05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9066,0.0444,0.8316,0.2835,0.4029,0.364,129099.6234,26702.0,0.0055,161567,0.5838,0.9471,0.9607,0.9598,0.9581,945009243,5.9583,0.0169,0.9856,0.8387,204604.0214,15112.0,4126.0,0.7117,0.9551,0.9399,0.9514,0.9537,0.9551,0.0781,0.123,0.9153,0.0725,0.7198,0.752,0.9633,0.3973,1497701437,33651,0.9957,0.9466,41502,7025,0.0821917808219178,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGACCGTCAACAAT,2362_A05,AIBS +AAACCAACAATATAGG-2368_B02,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-302,Human-302,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,58671,8537,0.148648648648649,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCAACAATATAGG,2368_B02,AIBS +AAACCGGCACAGAACG-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-517,Human-517,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,13150,4795,0.148648648648649,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCACAGAACG,2368_B02,AIBS +AAAGGCTCAGTAAAGC-2368_B02,Nonneuron,Immune,Microglia,Microglia,Human-151,Human-151,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,3317,1920,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGGCTCAGTAAAGC,2368_B02,AIBS +AAATGCCTCTCCTCAA-2368_B02,Nonneuron,Vascular,VLMC,VLMC,Human-442,Human-442,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,7803,3442,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAATGCCTCTCCTCAA,2368_B02,AIBS +AACAGCAAGCTAATTG-2368_B02,Nonneuron,Vascular,Pericyte,Pericyte,Human-265,Human-265,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,5639,2958,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACAGCAAGCTAATTG,2368_B02,AIBS +AAGGATGTCAATGACC-2368_B02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-542,Human-542,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,97409,10665,0.243243243243243,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGATGTCAATGACC,2368_B02,AIBS +ACAGGATCATGCTATG-2368_B02,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Human-365,Human-365,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,19737,5583,0.148648648648649,Homo sapiens,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGGATCATGCTATG,2368_B02,AIBS +ACCAAGCGTGCGCATG-2368_B02,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-315,Human-315,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,21443,6032,0.297297297297297,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAAGCGTGCGCATG,2368_B02,AIBS +ACCTAAATCGGCTAGC-2368_B02,Nonneuron,Vascular,Endo,Endo,Human-328,Human-328,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,2594,1534,0.027027027027027,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACCTAAATCGGCTAGC,2368_B02,AIBS +ACCTGGATCCTGATGG-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-346,Human-346,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,7255,3581,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTGGATCCTGATGG,2368_B02,AIBS +ACTAAAGCACCACAAC-2368_B02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-248,Human-248,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,93957,10309,0.22972972972973,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTAAAGCACCACAAC,2368_B02,AIBS +AGGTGAATCATAGCCG-2368_B02,Nonneuron,Vascular,Pericyte,Pericyte,Human-267,Human-267,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,4071,2123,0.027027027027027,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGTGAATCATAGCCG,2368_B02,AIBS +AGTGGACAGTGAACGA-2368_B02,Nonneuron,Vascular,Endo,Endo,Human-322,Human-322,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,8727,3464,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGTGGACAGTGAACGA,2368_B02,AIBS +AGTGTGGCAAGTGTTT-2368_B02,Nonneuron,Astro-Epen,Ependymal,Ependymal,Human-114,Human-114,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,2933,1861,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGTGTGGCAAGTGTTT,2368_B02,AIBS +ATCACAATCATAACGC-2368_B02,Nonneuron,Vascular,Endo,Endo,Human-330,Human-330,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,8907,3399,0.0810810810810811,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATCACAATCATAACGC,2368_B02,AIBS +ATTACGTCACCGGTAT-2368_B02,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-49,Human-49,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,2373,1569,0.0945945945945946,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTACGTCACCGGTAT,2368_B02,AIBS +ATTATCCTCGGGCCAT-2368_B02,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-426,Human-426,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,41890,8140,0.162162162162162,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATTATCCTCGGGCCAT,2368_B02,AIBS +ATTGTCCGTCAACAAT-2368_B02,Nonneuron,Vascular,VLMC,VLMC,Human-46,Human-46,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,9594,3985,0.162162162162162,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTGTCCGTCAACAAT,2368_B02,AIBS +CAGGACACATTGCGTA-2368_B02,Nonneuron,Vascular,Endo,Endo,Human-507,Human-507,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,7804,2769,0.0540540540540541,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGGACACATTGCGTA,2368_B02,AIBS +CCTCCTGAGTTATTCC-2368_B02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-205,Human-205,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,11451,4693,0.0405405405405405,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTCCTGAGTTATTCC,2368_B02,AIBS +CGAAGGCCAGTCTAGC-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-367,Human-367,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,6181,2953,0.0,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAAGGCCAGTCTAGC,2368_B02,AIBS +CGCCAAATCCCATAGG-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-359,Human-359,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,20382,6305,0.189189189189189,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCCAAATCCCATAGG,2368_B02,AIBS +CTTGCATGTGATGAGG-2368_B02,Nonneuron,Immune,Microglia,Microglia,Human-186,Human-186,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,9442,3630,0.0945945945945946,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTGCATGTGATGAGG,2368_B02,AIBS +GAACCAGCAACAGGTG-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-92,Human-92,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,31744,6658,0.189189189189189,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAACCAGCAACAGGTG,2368_B02,AIBS +GAGCCACTCACTTCAT-2368_B02,Nonneuron,Immune,Lymphocyte,T cells,Human-82,Human-82,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,10336,3941,0.216216216216216,Homo sapiens,CS20250428_GROUP_0059,Nonneuron,CL:0000084,T cells,6,Yao et al. 2023,,,"CD247, ITK",#f3b79b,,CS20250428_SUBCL_0015,CL:0000542,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGCCACTCACTTCAT,2368_B02,AIBS +GAGCGATAGTATTGTG-2368_B02,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-319,Human-319,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,30238,7219,0.297297297297297,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGCGATAGTATTGTG,2368_B02,AIBS +GCTAGCCAGCCGCTTT-2368_B02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-192,Human-192,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,17168,5522,0.202702702702703,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTAGCCAGCCGCTTT,2368_B02,AIBS +GTCTTTGTCTAGCTTT-2368_B02,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-62,Human-62,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,15077,4449,0.0,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCTTTGTCTAGCTTT,2368_B02,AIBS +TAATTGCCAAGGTGCA-2368_B02,Nonneuron,Vascular,VLMC,VLMC,Human-441,Human-441,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,2028,1478,0.108108108108108,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAATTGCCAAGGTGCA,2368_B02,AIBS +TGCTGGATCTAAGTGC-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-93,Human-93,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,13148,4332,0.135135135135135,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGCTGGATCTAAGTGC,2368_B02,AIBS +TGTAAGTGTTGTGACA-2368_B02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Human-282,Human-282,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,30068,7363,0.0945945945945946,Homo sapiens,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTAAGTGTTGTGACA,2368_B02,AIBS +TTATGACCAGTAGCCT-2368_B02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-225,Human-225,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,10689,2493,0.0,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTATGACCAGTAGCCT,2368_B02,AIBS +TTGAGGCGTGTGAGGA-2368_B02,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-299,Human-299,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,27434,7380,0.27027027027027,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGAGGCGTGTGAGGA,2368_B02,AIBS +TTGGATATCAAATCGC-2368_B02,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-63,Human-63,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,39883,7879,0.189189189189189,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGGATATCAAATCGC,2368_B02,AIBS +TTTCACCCAAACTAAG-2368_B02,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-128,Human-128,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,62460,9281,0.162162162162162,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TTTCACCCAAACTAAG,2368_B02,AIBS +TTTCACCCAATATACC-2368_B02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-518,Human-518,CL:0000003,2368_B02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8988,0.0377,0.8108,0.2502,0.3209,0.2897,152069.8979,36849.0,0.0019,138152,0.5068,0.9438,0.9603,0.9524,0.8736,1128510712,5.0865,0.0112,0.9849,0.8199,209062.58,7360.0,3051.0,0.8453,0.9741,0.9564,0.9617,0.9834,0.9055,0.0718,0.148,0.8262,0.076,0.6021,0.6677,0.9181,0.5894,1551453406,33424,0.9962,0.9462,47794,7683,0.202702702702703,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTCACCCAATATACC,2368_B02,AIBS +AAAGGACGTGCCGCAA-2349_C08,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Human-91,Human-91,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,46275,7678,0.228571428571429,Homo sapiens,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGACGTGCCGCAA,2349_C08,AIBS +AACTACTCATTAAACC-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-481,Human-481,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,69406,9144,0.188405797101449,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTACTCATTAAACC,2349_C08,AIBS +AACTGTTCACCAACCG-2349_C08,Nonneuron,Astro-Epen,Ependymal,Ependymal,Human-125,Human-125,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,23671,5609,0.0869565217391304,Homo sapiens,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACTGTTCACCAACCG,2349_C08,AIBS +AACTTAGTCTCGCCCA-2349_C08,Nonneuron,Astro-Epen,Ependymal,Ependymal,Human-113,Human-113,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,66075,9481,0.257142857142857,Homo sapiens,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACTTAGTCTCGCCCA,2349_C08,AIBS +AAGCTTGGTCAAGTAT-2349_C08,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-220,Human-220,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,39124,7411,0.115942028985507,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCTTGGTCAAGTAT,2349_C08,AIBS +AAGGATCCAATTTGGT-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-343,Human-343,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,58212,8852,0.228571428571429,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGATCCAATTTGGT,2349_C08,AIBS +AATAGCTGTCCCGGAA-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-514,Human-514,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,18479,5266,0.0579710144927536,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATAGCTGTCCCGGAA,2349_C08,AIBS +AATCCTAAGTTGCGTG-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-478,Human-478,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,35284,7060,0.0869565217391304,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATCCTAAGTTGCGTG,2349_C08,AIBS +ACCAGGACACAGGATG-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-221,Human-221,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,70217,9225,0.144927536231884,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAGGACACAGGATG,2349_C08,AIBS +AGATGAAGTTTGTTGC-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-87,Human-87,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,46858,8498,0.115942028985507,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGATGAAGTTTGTTGC,2349_C08,AIBS +AGGATGTCATTAAGCT-2349_C08,Nonneuron,Vascular,Pericyte,Pericyte,Human-275,Human-275,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,2863,1708,0.0,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGATGTCATTAAGCT,2349_C08,AIBS +AGGGCTACATAGACCC-2349_C08,Nonneuron,OPC-Oligo,COP,COP,Human-67,Human-67,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,12531,3726,0.0,Homo sapiens,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGGCTACATAGACCC,2349_C08,AIBS +ATATGCATCTTGTCCA-2349_C08,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-462,Human-462,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,8761,3343,0.0,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATGCATCTTGTCCA,2349_C08,AIBS +ATGGCTGTCAAGTGAG-2349_C08,Nonneuron,Astro-Epen,Ependymal,Ependymal,Human-115,Human-115,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,17968,5261,0.130434782608696,Homo sapiens,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGGCTGTCAAGTGAG,2349_C08,AIBS +CCCGCTTCAGGATTAA-2349_C08,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Human-344,Human-344,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,31559,6639,0.217391304347826,Homo sapiens,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCGCTTCAGGATTAA,2349_C08,AIBS +CCGATGCAGGTCGATT-2349_C08,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Human-410,Human-410,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,10003,3377,0.0571428571428571,Homo sapiens,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGATGCAGGTCGATT,2349_C08,AIBS +CTAAGGTTCGGCCAGT-2349_C08,Nonneuron,OPC-Oligo,COP,COP,Human-66,Human-66,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,6435,2739,0.0,Homo sapiens,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTAAGGTTCGGCCAGT,2349_C08,AIBS +CTCACACTCACGTTAA-2349_C08,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-162,Human-162,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,7762,2959,0.0,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCACACTCACGTTAA,2349_C08,AIBS +CTTAGGAGTCATGCCC-2349_C08,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-103,Human-103,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,31754,6650,0.2,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTAGGAGTCATGCCC,2349_C08,AIBS +CTTCAAGCAAGATTCT-2349_C08,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-243,Human-243,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,24326,5432,0.0857142857142857,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTCAAGCAAGATTCT,2349_C08,AIBS +GAGAACCAGTGCACGC-2349_C08,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-259,Human-259,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,73216,8817,0.173913043478261,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGAACCAGTGCACGC,2349_C08,AIBS +GAGAGGCGTTTAGTCC-2349_C08,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-195,Human-195,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,74117,9285,0.257142857142857,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGAGGCGTTTAGTCC,2349_C08,AIBS +GAGGTACAGGATTGCT-2349_C08,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-306,Human-306,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,76330,9506,0.289855072463768,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGGTACAGGATTGCT,2349_C08,AIBS +GATCGAGCATGATTGT-2349_C08,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-31,Human-31,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,23395,5467,0.114285714285714,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATCGAGCATGATTGT,2349_C08,AIBS +GCCATGATCTGCAAGT-2349_C08,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-309,Human-309,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,40127,7554,0.289855072463768,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCATGATCTGCAAGT,2349_C08,AIBS +GGATAACCAGCTCATA-2349_C08,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-536,Human-536,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,5118,2402,0.0,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGATAACCAGCTCATA,2349_C08,AIBS +GGCAATCGTCCACAAA-2349_C08,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB Dopa-GABA,Human-413,Human-413,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,16230,4463,0.114285714285714,Homo sapiens,CS20250428_GROUP_0067,Interneuron,,OB|Dopa|GABA,61,,,,,#902f6b,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCAATCGTCCACAAA,2349_C08,AIBS +GTAAGCGCATGGAGGC-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-215,Human-215,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,61217,8085,0.144927536231884,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTAAGCGCATGGAGGC,2349_C08,AIBS +GTCATGAGTACCGAAC-2349_C08,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-458,Human-458,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,30416,6645,0.228571428571429,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCATGAGTACCGAAC,2349_C08,AIBS +GTCGGTTCACCTCGCT-2349_C08,Nonneuron,Immune,Microglia,Microglia,Human-540,Human-540,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,6822,2914,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTCGGTTCACCTCGCT,2349_C08,AIBS +GTCGGTTCATTCCTCG-2349_C08,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-347,Human-347,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,14003,4031,0.114285714285714,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCGGTTCATTCCTCG,2349_C08,AIBS +GTTACCTGTCACGAAC-2349_C08,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Human-108,Human-108,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,34313,6661,0.0285714285714286,Homo sapiens,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTACCTGTCACGAAC,2349_C08,AIBS +GTTTCCTCAGCTAACC-2349_C08,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-506,Human-506,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,42930,7923,0.115942028985507,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTTCCTCAGCTAACC,2349_C08,AIBS +GTTTGTTTCCTTAAGA-2349_C08,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-156,Human-156,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,30570,6094,0.285714285714286,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTTGTTTCCTTAAGA,2349_C08,AIBS +TACCGAAGTCGACTAA-2349_C08,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-353,Human-353,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,28813,6586,0.188405797101449,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCGAAGTCGACTAA,2349_C08,AIBS +TCCTTAGTCGCAGGCT-2349_C08,Nonneuron,Vascular,Endo,Endo,Human-324,Human-324,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,5158,2514,0.0,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCCTTAGTCGCAGGCT,2349_C08,AIBS +TGCTAACAGCTCCTTA-2349_C08,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-210,Human-210,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,11642,4269,0.333333333333333,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,TGCTAACAGCTCCTTA,2349_C08,AIBS +TTTAGCAAGGAACACA-2349_C08,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-473,Human-473,CL:0000003,2349_C08,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8973,0.0427,0.8214,0.277,0.3866,0.3542,95647.9276,22381.5,0.0049,154799,0.5049,0.9036,0.9489,0.9383,0.8966,657483854,6.0921,0.0173,0.9736,0.9365,191237.3161,9088.0,3362.0,0.8249,0.9453,0.9373,0.9291,0.9531,0.8544,0.145,0.1316,0.9101,0.0704,0.708,0.6835,0.9507,0.2226,1314565311,33533,0.9982,0.9137,28023,5934,0.144927536231884,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTAGCAAGGAACACA,2349_C08,AIBS +AAAGCACCATAATCGT-2355_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-341,Human-341,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,50023,7983,0.161764705882353,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCACCATAATCGT,2355_C02,AIBS +AACAGGATCTTTGACT-2355_C02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-107,Human-107,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,30804,6758,0.191176470588235,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGGATCTTTGACT,2355_C02,AIBS +AATACCGGTAGACAAA-2355_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-539,Human-539,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,16969,4796,0.102941176470588,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATACCGGTAGACAAA,2355_C02,AIBS +AATGGCGCAGGCTAAG-2355_C02,Nonneuron,Immune,Microglia,Microglia,Human-531,Human-531,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,2575,1045,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATGGCGCAGGCTAAG,2355_C02,AIBS +AATGTCATCGCATTAA-2355_C02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Human-50,Human-50,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,9656,3906,0.0882352941176471,Homo sapiens,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATGTCATCGCATTAA,2355_C02,AIBS +ACAGGCTGTGGTGAGA-2355_C02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-279,Human-279,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,51110,8202,0.294117647058824,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGGCTGTGGTGAGA,2355_C02,AIBS +ACCCAGGGTTGTTCAC-2355_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-216,Human-216,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,55767,7771,0.205882352941176,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAGGGTTGTTCAC,2355_C02,AIBS +ATTCGTTTCTCGCCCA-2355_C02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-496,Human-496,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,89998,11239,0.264705882352941,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCGTTTCTCGCCCA,2355_C02,AIBS +CAGGGCTTCGTTACTT-2355_C02,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-171,Human-171,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,72467,9415,0.161764705882353,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAGGGCTTCGTTACTT,2355_C02,AIBS +CTTCGCGTCAGGCCTA-2355_C02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-534,Human-534,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,26667,6355,0.235294117647059,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTCGCGTCAGGCCTA,2355_C02,AIBS +GCGAAGCCACCTGTAA-2355_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-176,Human-176,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,74115,8846,0.205882352941176,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGAAGCCACCTGTAA,2355_C02,AIBS +GCTCATTGTCTAACCT-2355_C02,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-455,Human-455,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,76105,8923,0.0588235294117647,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTCATTGTCTAACCT,2355_C02,AIBS +GGGTGTTGTAATCACG-2355_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-261,Human-261,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,73354,9192,0.205882352941176,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGTGTTGTAATCACG,2355_C02,AIBS +TACTGGCCAGGACCAA-2355_C02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-37,Human-37,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,56626,8076,0.102941176470588,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACTGGCCAGGACCAA,2355_C02,AIBS +TAGTAGGAGCTCCTAC-2355_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-41,Human-41,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,17799,5330,0.0882352941176471,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGTAGGAGCTCCTAC,2355_C02,AIBS +TCAAGCTAGCCTCTGT-2355_C02,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Human-523_1,Human-523_1,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,64451,8490,0.147058823529412,Homo sapiens,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCAAGCTAGCCTCTGT,2355_C02,AIBS +TCTAGCCTCGGTTAGT-2355_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-166,Human-166,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,23128,5412,0.0294117647058824,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTAGCCTCGGTTAGT,2355_C02,AIBS +TGTCAATCATTGTCAG-2355_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-202,Human-202,CL:0000003,2355_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9087,0.0392,0.8129,0.2529,0.3357,0.2985,236471.7008,42770.0,0.0023,142624,0.6374,0.9475,0.96,0.9589,0.9632,1602568716,5.3069,0.0117,0.9863,0.8505,180466.1133,11346.0,3766.0,0.7651,0.954,0.9396,0.9461,0.9308,0.9506,0.1347,0.1235,0.9228,0.0717,0.7276,0.7047,0.9648,0.2653,1223018850,33534,0.9956,0.933,32608,6306,0.0441176470588235,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTCAATCATTGTCAG,2355_C02,AIBS +AAACCAACAGTAAGTA-2370_B03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-27,Human-27,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,27220,6162,0.0493827160493827,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCAACAGTAAGTA,2370_B03,AIBS +AAACGGATCTTTAAGG-2370_B03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-90,Human-90,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,94523,9493,0.195121951219512,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGGATCTTTAAGG,2370_B03,AIBS +AAATCCGGTGTTGTAG-2370_B03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-29,Human-29,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,31799,6848,0.037037037037037,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATCCGGTGTTGTAG,2370_B03,AIBS +AACTAGTGTCGCATAA-2370_B03,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-211,Human-211,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,7320,3520,0.024390243902439,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AACTAGTGTCGCATAA,2370_B03,AIBS +ACCAGCTCATCCCTCA-2370_B03,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-357,Human-357,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,46042,7282,0.123456790123457,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAGCTCATCCCTCA,2370_B03,AIBS +ACCGAAGCACAACAGG-2370_B03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-382,Human-382,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,16847,4741,0.037037037037037,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCGAAGCACAACAGG,2370_B03,AIBS +ACTTAGTCATCGTTCT-2370_B03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-525,Human-525,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,45118,7465,0.111111111111111,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTAGTCATCGTTCT,2370_B03,AIBS +ACTTGAATCTAAATCG-2370_B03,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Human-521_2,Human-521_2,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,67325,9200,0.320987654320988,Homo sapiens,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTGAATCTAAATCG,2370_B03,AIBS +AGCAATTGTTTGCGAA-2370_B03,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-520,Human-520,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,29478,6491,0.121951219512195,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCAATTGTTTGCGAA,2370_B03,AIBS +AGTTGGCGTGTCCAGG-2370_B03,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-58,Human-58,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,10226,4188,0.024390243902439,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTTGGCGTGTCCAGG,2370_B03,AIBS +CACATACAGTCACTCC-2370_B03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-228,Human-228,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,43991,7296,0.024390243902439,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACATACAGTCACTCC,2370_B03,AIBS +CCGTTGCGTCAATAGT-2370_B03,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-313,Human-313,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,70449,8940,0.234567901234568,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGTTGCGTCAATAGT,2370_B03,AIBS +CTGAAACTCATGTTTC-2370_B03,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-406,Human-406,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,37672,6535,0.24390243902439,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGAAACTCATGTTTC,2370_B03,AIBS +GACCTAGTCTCTAGCC-2370_B03,Nonneuron,Vascular,Endo,Endo,Human-321,Human-321,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,28549,6234,0.024390243902439,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GACCTAGTCTCTAGCC,2370_B03,AIBS +GCAAGTGCAAACCTTG-2370_B03,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-152,Human-152,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,3864,2124,0.0,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCAAGTGCAAACCTTG,2370_B03,AIBS +GGGTCAACATTAGGCC-2370_B03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Human-229,Human-229,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,33380,6387,0.0617283950617284,Homo sapiens,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGTCAACATTAGGCC,2370_B03,AIBS +TGAGGCACAGCACGAA-2370_B03,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Human-203,Human-203,CL:0000003,2370_B03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9017,0.0397,0.85,0.2476,0.3485,0.3099,198405.3425,34988.0,0.0045,144634,0.6231,0.9445,0.9528,0.948,0.9424,1603511978,5.3044,0.0111,0.9839,0.9456,158720.84,8896.0,3294.5,0.8143,0.9737,0.9552,0.9674,0.9311,0.9731,0.1272,0.1452,0.9239,0.0706,0.7081,0.7147,0.9632,0.2276,1282781829,33485,0.9959,0.9379,69627,9348,0.222222222222222,Homo sapiens,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGAGGCACAGCACGAA,2370_B03,AIBS +AAGGTATAGATTCCTT-2386_A02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-360,Human-360,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,45104,7749,0.22,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGTATAGATTCCTT,2386_A02,AIBS +AATTGCCAGTAACCAC-2386_A02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-508,Human-508,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,24671,5376,0.14,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGCCAGTAACCAC,2386_A02,AIBS +ACGTCAAGTAAGCACC-2386_A02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-509,Human-509,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,11381,4235,0.04,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGTCAAGTAAGCACC,2386_A02,AIBS +ACGTCAAGTGTTAGCA-2386_A02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-381,Human-381,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,22710,5530,0.04,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGTCAAGTGTTAGCA,2386_A02,AIBS +AGGATGCAGGGCCACT-2386_A02,Nonneuron,Vascular,Endo,Endo,Human-331,Human-331,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,3861,1827,0.02,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGATGCAGGGCCACT,2386_A02,AIBS +AGGATGCAGTCACGAT-2386_A02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Human-285,Human-285,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,33186,6686,0.1,Homo sapiens,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGATGCAGTCACGAT,2386_A02,AIBS +AGGTAACCAGGTTTGC-2386_A02,Nonneuron,Astro-Epen,Ependymal,Ependymal,Human-116,Human-116,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,15536,4573,0.1,Homo sapiens,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGTAACCAGGTTTGC,2386_A02,AIBS +AGGTTACTCATGCAAC-2386_A02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Human-533,Human-533,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,26791,5777,0.18,Homo sapiens,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTTACTCATGCAAC,2386_A02,AIBS +ATAAGTCGTTAGTGAT-2386_A02,Nonneuron,Immune,Microglia,Microglia,Human-417,Human-417,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,3985,2003,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATAAGTCGTTAGTGAT,2386_A02,AIBS +CAGCCTAAGTATTGGC-2386_A02,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-230,Human-230,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,2588,1736,0.12,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGCCTAAGTATTGGC,2386_A02,AIBS +CATGGCGGTTTCCGGC-2386_A02,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Human-303,Human-303,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,47437,7805,0.16,Homo sapiens,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATGGCGGTTTCCGGC,2386_A02,AIBS +CCCTAATGTACAATGT-2386_A02,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Human-409,Human-409,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,21056,5182,0.06,Homo sapiens,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTAATGTACAATGT,2386_A02,AIBS +CCGCAAGGTCACAAAT-2386_A02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Human-338,Human-338,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,62042,7979,0.18,Homo sapiens,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGCAAGGTCACAAAT,2386_A02,AIBS +CGCGGATTCATGAGCT-2386_A02,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-277,Human-277,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,9333,3241,0.2,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGCGGATTCATGAGCT,2386_A02,AIBS +CTAATAGTCAGGTTTA-2386_A02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Human-194,Human-194,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,14401,4406,0.3,Homo sapiens,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAATAGTCAGGTTTA,2386_A02,AIBS +CTCTGTTCAACACCTA-2386_A02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-167,Human-167,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,35435,5962,0.06,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCTGTTCAACACCTA,2386_A02,AIBS +CTGGCTTTCGGTTAGT-2386_A02,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-407,Human-407,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,65794,9091,0.3,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGGCTTTCGGTTAGT,2386_A02,AIBS +GAGATAAGTAATTAGC-2386_A02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-548,Human-548,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,33077,6549,0.14,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGATAAGTAATTAGC,2386_A02,AIBS +GAGGTACAGGGTTATC-2386_A02,Nonneuron,Vascular,Endo,Endo,Human-329,Human-329,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,3818,1772,0.02,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGGTACAGGGTTATC,2386_A02,AIBS +GCTGACATCTAAGTGC-2386_A02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-283,Human-283,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,22619,5610,0.34,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTGACATCTAAGTGC,2386_A02,AIBS +GCTGGTTCATCCTGAA-2386_A02,Nonneuron,Vascular,VLMC,VLMC,Human-3,Human-3,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,5303,2231,0.02,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCTGGTTCATCCTGAA,2386_A02,AIBS +GGCGGTAAGGTGAAAT-2386_A02,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST D1 GABA,Human-161,Human-161,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,41658,7176,0.34,Homo sapiens,CS20250428_GROUP_0065,Interneuron,,AMY|SLEA|BNST|D1|GABA,47,,,,,#9e86de,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCGGTAAGGTGAAAT,2386_A02,AIBS +GTAGCCATCGCTTGCT-2386_A02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-358,Human-358,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,17046,5088,0.26,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTAGCCATCGCTTGCT,2386_A02,AIBS +GTAGGTGCAGTGAACG-2386_A02,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Human-375,Human-375,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,14113,4541,0.16,Homo sapiens,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTAGGTGCAGTGAACG,2386_A02,AIBS +TACTGAGGTTAGCAGC-2386_A02,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Human-304,Human-304,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,27232,6436,0.26,Homo sapiens,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACTGAGGTTAGCAGC,2386_A02,AIBS +TAGCGCGGTTAAGTGT-2386_A02,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-300,Human-300,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,32960,7274,0.24,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCGCGGTTAAGTGT,2386_A02,AIBS +TATCCAGCAATACTGT-2386_A02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-482,Human-482,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,18488,4834,0.1,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATCCAGCAATACTGT,2386_A02,AIBS +TCAGGTTAGAGGATAT-2386_A02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-233,Human-233,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,15574,4428,0.03,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCAGGTTAGAGGATAT,2386_A02,AIBS +TGGATTCAGTCTTGAA-2386_A02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-488,Human-488,CL:0000003,2386_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0399,0.8521,0.2305,0.3066,0.2794,60752.2499,19498.0,0.0034,146661,0.3121,0.9173,0.9316,0.9271,0.9279,905269276,5.1904,0.0126,0.9818,0.8876,92350.3728,10115.0,3531.0,0.6398,0.9468,0.932,0.9417,0.9277,0.9295,0.1157,0.1295,0.911,0.0689,0.7126,0.7146,0.9558,0.4001,1376112905,34008,0.9951,0.9412,9410,3298,0.32,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGATTCAGTCTTGAA,2386_A02,AIBS +AATTGCTCAACCGCCA-2362_1_D05,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-213,Human-213,CL:0000003,2362_1_D05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9005,0.0423,0.8593,0.2626,0.3821,0.3452,151900.3209,28120.5,0.0026,153668,0.608,0.9497,0.9602,0.9606,0.938,1043251404,5.7543,0.0163,0.9866,0.9379,249706.3551,23789.5,5428.0,0.7706,0.9481,0.9321,0.9441,0.9219,0.9321,0.1023,0.1351,0.9286,0.0687,0.7248,0.7454,0.9686,0.3267,1714983247,33679,0.9957,0.9346,14614,4765,0.188405797101449,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AATTGCTCAACCGCCA,2362_1_D05,AIBS +ACTCAGTAGGTAAGGC-2362_1_D05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-538,Human-538,CL:0000003,2362_1_D05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9005,0.0423,0.8593,0.2626,0.3821,0.3452,151900.3209,28120.5,0.0026,153668,0.608,0.9497,0.9602,0.9606,0.938,1043251404,5.7543,0.0163,0.9866,0.9379,249706.3551,23789.5,5428.0,0.7706,0.9481,0.9321,0.9441,0.9219,0.9321,0.1023,0.1351,0.9286,0.0687,0.7248,0.7454,0.9686,0.3267,1714983247,33679,0.9957,0.9346,46730,7626,0.0285714285714286,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTCAGTAGGTAAGGC,2362_1_D05,AIBS +GTACTGGTCTCGCCTG-2362_1_D05,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-212,Human-212,CL:0000003,2362_1_D05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9005,0.0423,0.8593,0.2626,0.3821,0.3452,151900.3209,28120.5,0.0026,153668,0.608,0.9497,0.9602,0.9606,0.938,1043251404,5.7543,0.0163,0.9866,0.9379,249706.3551,23789.5,5428.0,0.7706,0.9481,0.9321,0.9441,0.9219,0.9321,0.1023,0.1351,0.9286,0.0687,0.7248,0.7454,0.9686,0.3267,1714983247,33679,0.9957,0.9346,20491,5165,0.0434782608695652,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,GTACTGGTCTCGCCTG,2362_1_D05,AIBS +TAACAAGCAGCCTGCA-2362_1_D05,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-129,Human-129,CL:0000003,2362_1_D05,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9005,0.0423,0.8593,0.2626,0.3821,0.3452,151900.3209,28120.5,0.0026,153668,0.608,0.9497,0.9602,0.9606,0.938,1043251404,5.7543,0.0163,0.9866,0.9379,249706.3551,23789.5,5428.0,0.7706,0.9481,0.9321,0.9441,0.9219,0.9321,0.1023,0.1351,0.9286,0.0687,0.7248,0.7454,0.9686,0.3267,1714983247,33679,0.9957,0.9346,8678,3404,0.0,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TAACAAGCAGCCTGCA,2362_1_D05,AIBS +ACACTTAAGGCGGGTA-2346_B06,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Human-374,Human-374,CL:0000003,2346_B06,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8843,0.0334,0.7022,0.243,0.2948,0.2698,141477.9194,23635.5,0.0018,121598,0.5368,0.91,0.9503,0.9428,0.9088,1071836717,5.2394,0.0132,0.9759,0.8588,150436.9031,11888.0,3494.5,0.6704,0.9446,0.9365,0.9278,0.9438,0.9344,0.0856,0.1236,0.8977,0.066,0.7081,0.7338,0.9425,0.3666,1139709978,33501,0.9983,0.9328,11183,4300,0.0789473684210526,Homo sapiens,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACACTTAAGGCGGGTA,2346_B06,AIBS +TACTGGCCACTGACCG-2346_B06,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-479,Human-479,CL:0000003,2346_B06,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8843,0.0334,0.7022,0.243,0.2948,0.2698,141477.9194,23635.5,0.0018,121598,0.5368,0.91,0.9503,0.9428,0.9088,1071836717,5.2394,0.0132,0.9759,0.8588,150436.9031,11888.0,3494.5,0.6704,0.9446,0.9365,0.9278,0.9438,0.9344,0.0856,0.1236,0.8977,0.066,0.7081,0.7338,0.9425,0.3666,1139709978,33501,0.9983,0.9328,15107,4709,0.0526315789473684,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACTGGCCACTGACCG,2346_B06,AIBS +AAGACATAGCACAGAA-2433_1_G04,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Human-269,Human-269,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,10357,3881,0.238095238095238,Homo sapiens,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAGACATAGCACAGAA,2433_1_G04,AIBS +AATTGGGAGACAGGCG-2433_1_G04,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Human-122,Human-122,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,24001,6098,0.285714285714286,Homo sapiens,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AATTGGGAGACAGGCG,2433_1_G04,AIBS +ACTTGTCGTGATGAGG-2433_1_G04,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Human-296,Human-296,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,5376,2934,0.0238095238095238,Homo sapiens,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTGTCGTGATGAGG,2433_1_G04,AIBS +AGAGATTAGCGCAATT-2433_1_G04,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Human-119,Human-119,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,10852,3651,0.0,Homo sapiens,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AGAGATTAGCGCAATT,2433_1_G04,AIBS +AGCTAAACACCTCGCT-2433_1_G04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-242,Human-242,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,99197,10333,0.180722891566265,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTAAACACCTCGCT,2433_1_G04,AIBS +AGTAGCTTCATTGCGG-2433_1_G04,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Human-404,Human-404,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,91536,10857,0.253012048192771,Homo sapiens,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGTAGCTTCATTGCGG,2433_1_G04,AIBS +AGTTGTCAGTCAGTAC-2433_1_G04,Nonneuron,Vascular,Endo,Endo,Human-505,Human-505,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,5019,2148,0.0,Homo sapiens,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGTTGTCAGTCAGTAC,2433_1_G04,AIBS +AGTTTGATCTGTGAGT-2433_1_G04,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Human-420,Human-420,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,11909,3581,0.0714285714285714,Homo sapiens,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AGTTTGATCTGTGAGT,2433_1_G04,AIBS +ATGAGCCGTGGAAACG-2433_1_G04,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Human-421,Human-421,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,16517,4929,0.0238095238095238,Homo sapiens,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,ATGAGCCGTGGAAACG,2433_1_G04,AIBS +CCCAAACCAATAGTCT-2433_1_G04,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-214,Human-214,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,6956,3260,0.0714285714285714,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,CCCAAACCAATAGTCT,2433_1_G04,AIBS +CTTGAACAGGAGGGTT-2433_1_G04,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Human-524,Human-524,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,45049,8277,0.253012048192771,Homo sapiens,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTGAACAGGAGGGTT,2433_1_G04,AIBS +GAGCAAATCCTCACTA-2433_1_G04,Nonneuron,Vascular,VLMC,VLMC,Human-446,Human-446,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,7267,3285,0.0714285714285714,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGCAAATCCTCACTA,2433_1_G04,AIBS +GGTAGGAGTCCGTAGG-2433_1_G04,Nonneuron,Vascular,SMC,SMC,Human-264,Human-264,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,6567,3453,0.119047619047619,Homo sapiens,CS20250428_GROUP_0028,Nonneuron,CL:0000192,SMC,16,Yao et al. 2023,,,ACTA2,#177242,,CS20250428_SUBCL_0024,CL:0000192,SMC,12,#ab0c8d,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGTAGGAGTCCGTAGG,2433_1_G04,AIBS +GTCTCACTCCCTGGTT-2433_1_G04,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-146,Human-146,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,27425,6592,0.261904761904762,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTCTCACTCCCTGGTT,2433_1_G04,AIBS +TTTAAGGTCGCTAGAT-2433_1_G04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-391,Human-391,CL:0000003,2433_1_G04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8818,0.0299,0.5564,0.2555,0.2947,0.2687,141917.3042,26459.0,0.0059,110471,0.433,0.9067,0.9394,0.9284,0.9357,1181745392,4.8462,0.013,0.9797,0.4543,158949.5163,6021.0,2689.0,0.7904,0.9519,0.9381,0.9442,0.9426,0.8692,0.1148,0.1564,0.9032,0.0655,0.6814,0.7119,0.958,0.3562,1323572622,33121,0.9954,0.9386,23360,6677,0.132530120481928,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TTTAAGGTCGCTAGAT,2433_1_G04,AIBS +AACCTTGCAGTTTCTC-2368_A02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-491,Human-491,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,25200,5412,0.108108108108108,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTTGCAGTTTCTC,2368_A02,AIBS +AAGCCTGTCTAAGTCA-2368_A02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-246,Human-246,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,80192,10324,0.162162162162162,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTGTCTAAGTCA,2368_A02,AIBS +AAGGATCCAAACTAAG-2368_A02,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Human-362,Human-362,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,23805,6429,0.189189189189189,Homo sapiens,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGATCCAAACTAAG,2368_A02,AIBS +ACAACAACATTAAACC-2368_A02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Human-287,Human-287,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,46254,7931,0.216216216216216,Homo sapiens,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAACAACATTAAACC,2368_A02,AIBS +ACCTACCTCGCTTGCT-2368_A02,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-64,Human-64,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,68771,9468,0.202702702702703,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTACCTCGCTTGCT,2368_A02,AIBS +ACTTATCTCAAGGACA-2368_A02,Nonneuron,Immune,Microglia,Microglia,Human-147,Human-147,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,4387,2191,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACTTATCTCAAGGACA,2368_A02,AIBS +AGAAACTAGGCGTAAA-2368_A02,Subpallium GABA,CN MGE GABA,STR SST GABA,STR SST-ADARB2 GABA,Human-173,Human-173,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,61524,9370,0.189189189189189,Homo sapiens,CS20250428_GROUP_0042,Interneuron,,STR|SST|ADARB2|GABA,30,,,,,#cfebed,,CS20250428_SUBCL_0032,,STR|SST|GABA,20,#ed8d40,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGAAACTAGGCGTAAA,2368_A02,AIBS +AGGACTAAGTAAGTCC-2368_A02,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-316,Human-316,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,57074,9563,0.27027027027027,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGACTAAGTAAGTCC,2368_A02,AIBS +AGTAACACACGGTACT-2368_A02,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Human-522,Human-522,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,56678,9608,0.243243243243243,Homo sapiens,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTAACACACGGTACT,2368_A02,AIBS +ATAATGGCAAGTGTTT-2368_A02,Nonneuron,Immune,Microglia,Microglia,Human-148,Human-148,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,3099,1695,0.027027027027027,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATAATGGCAAGTGTTT,2368_A02,AIBS +CCATCACTCGGCTATG-2368_A02,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-400,Human-400,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,70334,9530,0.175675675675676,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CCATCACTCGGCTATG,2368_A02,AIBS +CCTAAGGTCGGCTATG-2368_A02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-254,Human-254,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,42208,8045,0.121621621621622,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTAAGGTCGGCTATG,2368_A02,AIBS +GCAACAGCATCTAGCA-2368_A02,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-428,Human-428,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,68131,9086,0.202702702702703,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCAACAGCATCTAGCA,2368_A02,AIBS +GGATACTTCTTGACCC-2368_A02,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-523_2,Human-523_2,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,15165,5330,0.0405405405405405,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGATACTTCTTGACCC,2368_A02,AIBS +TAGTGTGGTTAAATGC-2368_A02,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Human-364,Human-364,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,14783,4921,0.027027027027027,Homo sapiens,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGTGTGGTTAAATGC,2368_A02,AIBS +TGCTTTAGTACCAGGT-2368_A02,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-301,Human-301,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,9040,3918,0.027027027027027,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGCTTTAGTACCAGGT,2368_A02,AIBS +TTGTTCCCAAATTGCT-2368_A02,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Human-419,Human-419,CL:0000003,2368_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.887,0.0291,0.7029,0.2492,0.2822,0.2569,163163.7731,29937.5,0.0187,106994,0.5017,0.9422,0.9611,0.9542,0.9442,1201864353,5.2126,0.013,0.9845,0.7489,125052.6138,4978.0,2298.0,0.7924,0.973,0.9542,0.9702,0.98,0.9809,0.1595,0.1534,0.9275,0.0679,0.7062,0.689,0.9703,0.1877,921137553,33143,0.996,0.9308,89762,10316,0.337837837837838,Homo sapiens,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,TTGTTCCCAAATTGCT,2368_A02,AIBS +TTATCCTAGTTAGCTA-2377_A07,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-59,Human-59,CL:0000003,2377_A07,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8918,0.0313,0.7304,0.1927,0.2366,0.2113,147137.0273,39112.0,0.0029,114926,0.3979,0.9492,0.9546,0.9506,0.9428,1447975486,4.0045,0.0095,0.9847,0.8295,143728.5201,16770.0,4399.0,0.6674,0.9737,0.9557,0.9698,0.9665,0.9833,0.0987,0.1278,0.9173,0.0707,0.7189,0.7356,0.9659,0.3546,1414432366,33690,0.9962,0.942,82964,8900,0.102040816326531,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTATCCTAGTTAGCTA,2377_A07,AIBS +CGTTTCTCAGTTTGTG-2370_C03,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Human-499,Human-499,CL:0000003,2370_C03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8955,0.0377,0.7683,0.2183,0.3021,0.2697,192893.0226,40653.0,0.0028,137610,0.5295,0.9423,0.9584,0.9514,0.9456,1408504851,4.5716,0.0105,0.9843,0.9086,195350.605,16386.5,4485.0,0.7775,0.9728,0.9529,0.9682,0.9522,0.9412,0.138,0.1326,0.9355,0.0717,0.7313,0.7142,0.9706,0.2077,1426450118,33436,0.9959,0.9341,32818,6075,0.0,Homo sapiens,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTTTCTCAGTTTGTG,2370_C03,AIBS +AACCTCACATAACGGG-2368_C02,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Human-503,Human-503,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,58683,8654,0.169014084507042,Homo sapiens,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTCACATAACGGG,2368_C02,AIBS +AAGCTCCCATCACTTC-2368_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Human-224,Human-224,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,50917,7661,0.295774647887324,Homo sapiens,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCTCCCATCACTTC,2368_C02,AIBS +AAGGATTAGCTTAGCG-2368_C02,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-423,Human-423,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,22839,6659,0.305555555555556,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGGATTAGCTTAGCG,2368_C02,AIBS +AATAGCTGTTATCCGT-2368_C02,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Human-504,Human-504,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,73731,9380,0.183098591549296,Homo sapiens,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATAGCTGTTATCCGT,2368_C02,AIBS +ACAACATGTTTCCGGC-2368_C02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-252,Human-252,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,6829,3088,0.111111111111111,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAACATGTTTCCGGC,2368_C02,AIBS +AGTAAACAGCAGGTGG-2368_C02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Human-286,Human-286,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,23433,5975,0.0833333333333333,Homo sapiens,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTAAACAGCAGGTGG,2368_C02,AIBS +ATGCGATTCCGCCTAT-2368_C02,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Human-418,Human-418,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,65730,8674,0.23943661971831,Homo sapiens,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,ATGCGATTCCGCCTAT,2368_C02,AIBS +CCGGTAGGTTGCGTAA-2368_C02,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-168,Human-168,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,15100,4705,0.111111111111111,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGGTAGGTTGCGTAA,2368_C02,AIBS +CCTAAAGGTATTGAGT-2368_C02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-281,Human-281,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,9060,3377,0.183098591549296,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTAAAGGTATTGAGT,2368_C02,AIBS +CGAACAAAGTTGCCTC-2368_C02,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-36,Human-36,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,66656,8814,0.333333333333333,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAACAAAGTTGCCTC,2368_C02,AIBS +GACCGAACATTTGCTC-2368_C02,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Human-294,Human-294,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,49612,7462,0.183098591549296,Homo sapiens,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GACCGAACATTTGCTC,2368_C02,AIBS +GAGGTACAGCTGTAAC-2368_C02,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-130,Human-130,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,24495,5665,0.0704225352112676,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GAGGTACAGCTGTAAC,2368_C02,AIBS +GAGTAACCATAGTCAT-2368_C02,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-430,Human-430,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,84334,9821,0.166666666666667,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GAGTAACCATAGTCAT,2368_C02,AIBS +TGATCCTGTAGTTAAC-2368_C02,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Human-295,Human-295,CL:0000003,2368_C02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8788,0.0234,0.6039,0.2374,0.2439,0.2208,177472.6754,30094.0,0.0036,85953,0.4968,0.9441,0.9617,0.9547,0.9461,1268397211,4.5114,0.0102,0.9847,0.7115,156636.1658,4453.0,2124.0,0.8309,0.974,0.956,0.9709,0.9617,0.9826,0.0978,0.1342,0.9221,0.07,0.718,0.7422,0.9664,0.2754,1119478677,33218,0.996,0.9477,8780,3241,0.0,Homo sapiens,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGATCCTGTAGTTAAC,2368_C02,AIBS +TCCAGGATCGCTAGCA-2346_C06,Nonneuron,Immune,Microglia,Microglia,Human-532,Human-532,CL:0000003,2346_C06,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaH,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.894,0.038,0.7991,0.2364,0.3164,0.2886,119584.3526,23860.0,0.0023,138313,0.5066,0.9031,0.9501,0.9412,0.9413,1011205286,5.0659,0.0133,0.9734,0.8776,118244.8661,13095.5,3897.0,0.5747,0.9427,0.9349,0.9305,0.9346,0.9526,0.0735,0.1201,0.8832,0.0705,0.6926,0.7272,0.935,0.5021,999878588,33487,0.9984,0.9383,4933,2262,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCCAGGATCGCTAGCA,2346_C06,AIBS +ATCCATAAGTAACGAG-2357_A03,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Human-298,Human-298,CL:0000003,2357_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8972,0.0349,0.7022,0.2332,0.2873,0.259,118036.3368,35400.0,0.0023,128181,0.3469,0.9479,0.9608,0.9577,0.9404,1183314276,4.6779,0.0094,0.9861,0.7999,96146.4875,14210.0,4348.0,0.5908,0.9563,0.9415,0.9524,0.9517,0.9186,0.1215,0.1356,0.9279,0.0703,0.7219,0.7243,0.9674,0.2739,963868537,33639,0.9956,0.9332,22182,5794,0.1,Homo sapiens,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCCATAAGTAACGAG,2357_A03,AIBS +CACGCTAAGGATTGCT-2357_A03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-500,Human-500,CL:0000003,2357_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8972,0.0349,0.7022,0.2332,0.2873,0.259,118036.3368,35400.0,0.0023,128181,0.3469,0.9479,0.9608,0.9577,0.9404,1183314276,4.6779,0.0094,0.9861,0.7999,96146.4875,14210.0,4348.0,0.5908,0.9563,0.9415,0.9524,0.9517,0.9186,0.1215,0.1356,0.9279,0.0703,0.7219,0.7243,0.9674,0.2739,963868537,33639,0.9956,0.9332,43795,8270,0.22,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACGCTAAGGATTGCT,2357_A03,AIBS +CCATTATTCCTCATGC-2357_A03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-493,Human-493,CL:0000003,2357_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8972,0.0349,0.7022,0.2332,0.2873,0.259,118036.3368,35400.0,0.0023,128181,0.3469,0.9479,0.9608,0.9577,0.9404,1183314276,4.6779,0.0094,0.9861,0.7999,96146.4875,14210.0,4348.0,0.5908,0.9563,0.9415,0.9524,0.9517,0.9186,0.1215,0.1356,0.9279,0.0703,0.7219,0.7243,0.9674,0.2739,963868537,33639,0.9956,0.9332,68637,8993,0.22,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCATTATTCCTCATGC,2357_A03,AIBS +CCGTTTGGTTACGCGG-2357_A03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-494,Human-494,CL:0000003,2357_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8972,0.0349,0.7022,0.2332,0.2873,0.259,118036.3368,35400.0,0.0023,128181,0.3469,0.9479,0.9608,0.9577,0.9404,1183314276,4.6779,0.0094,0.9861,0.7999,96146.4875,14210.0,4348.0,0.5908,0.9563,0.9415,0.9524,0.9517,0.9186,0.1215,0.1356,0.9279,0.0703,0.7219,0.7243,0.9674,0.2739,963868537,33639,0.9956,0.9332,79662,9076,0.2,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGTTTGGTTACGCGG,2357_A03,AIBS +TTTCGTCCACCTGCCT-2357_A03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-38,Human-38,CL:0000003,2357_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8972,0.0349,0.7022,0.2332,0.2873,0.259,118036.3368,35400.0,0.0023,128181,0.3469,0.9479,0.9608,0.9577,0.9404,1183314276,4.6779,0.0094,0.9861,0.7999,96146.4875,14210.0,4348.0,0.5908,0.9563,0.9415,0.9524,0.9517,0.9186,0.1215,0.1356,0.9279,0.0703,0.7219,0.7243,0.9674,0.2739,963868537,33639,0.9956,0.9332,82498,10144,0.28,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTCGTCCACCTGCCT,2357_A03,AIBS +AATAGCTGTAATGACT-2447_C06,Nonneuron,Immune,Macrophage,BAM,Human-73,Human-73,CL:0000003,2447_C06,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaH,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8912,0.0373,0.8019,0.2315,0.3057,0.2698,178507.3776,32596.0,0.0097,136586,0.5954,0.9469,0.9604,0.9537,0.955,1439126478,4.6523,0.0156,0.9829,0.9156,147979.6371,15767.0,4371.0,0.6875,0.9505,0.9376,0.9457,0.944,0.9699,0.1234,0.1334,0.9255,0.0738,0.7183,0.7168,0.9635,0.177,1193011834,33470,0.9966,0.9393,8359,2576,0.0,Homo sapiens,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATAGCTGTAATGACT,2447_C06,AIBS +GATAGACCATCCATCT-2447_C06,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Human-112,Human-112,CL:0000003,2447_C06,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaH,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8912,0.0373,0.8019,0.2315,0.3057,0.2698,178507.3776,32596.0,0.0097,136586,0.5954,0.9469,0.9604,0.9537,0.955,1439126478,4.6523,0.0156,0.9829,0.9156,147979.6371,15767.0,4371.0,0.6875,0.9505,0.9376,0.9457,0.944,0.9699,0.1234,0.1334,0.9255,0.0738,0.7183,0.7168,0.9635,0.177,1193011834,33470,0.9966,0.9393,4049,2058,0.0,Homo sapiens,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATAGACCATCCATCT,2447_C06,AIBS +TGCCGGTAGTTGTCCC-2447_C06,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-307,Human-307,CL:0000003,2447_C06,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaH,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8912,0.0373,0.8019,0.2315,0.3057,0.2698,178507.3776,32596.0,0.0097,136586,0.5954,0.9469,0.9604,0.9537,0.955,1439126478,4.6523,0.0156,0.9829,0.9156,147979.6371,15767.0,4371.0,0.6875,0.9505,0.9376,0.9457,0.944,0.9699,0.1234,0.1334,0.9255,0.0738,0.7183,0.7168,0.9635,0.177,1193011834,33470,0.9966,0.9393,28470,6697,0.0975609756097561,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGCCGGTAGTTGTCCC,2447_C06,AIBS +CATAGGCGTAGCTAAT-2357_E03,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Human-459,Human-459,CL:0000003,2357_E03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9019,0.0361,0.7714,0.2577,0.3266,0.2925,182859.4754,42094.5,0.0036,131177,0.5548,0.9497,0.958,0.9605,0.8916,1343651425,5.2991,0.0102,0.9856,0.864,184821.5689,6951.0,2867.0,0.8679,0.9527,0.9371,0.9461,0.9455,0.899,0.1129,0.1358,0.9239,0.0677,0.7204,0.7316,0.9671,0.189,1358068888,33246,0.9956,0.9378,26978,6335,0.342465753424658,Homo sapiens,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATAGGCGTAGCTAAT,2357_E03,AIBS +GCCCATAAGCAAGATG-2357_E03,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-240,Human-240,CL:0000003,2357_E03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9019,0.0361,0.7714,0.2577,0.3266,0.2925,182859.4754,42094.5,0.0036,131177,0.5548,0.9497,0.958,0.9605,0.8916,1343651425,5.2991,0.0102,0.9856,0.864,184821.5689,6951.0,2867.0,0.8679,0.9527,0.9371,0.9461,0.9455,0.899,0.1129,0.1358,0.9239,0.0677,0.7204,0.7316,0.9671,0.189,1358068888,33246,0.9956,0.9378,14159,4058,0.027027027027027,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCCATAAGCAAGATG,2357_E03,AIBS +TCAAGTATCTTAGCCC-2357_E03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-256,Human-256,CL:0000003,2357_E03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9019,0.0361,0.7714,0.2577,0.3266,0.2925,182859.4754,42094.5,0.0036,131177,0.5548,0.9497,0.958,0.9605,0.8916,1343651425,5.2991,0.0102,0.9856,0.864,184821.5689,6951.0,2867.0,0.8679,0.9527,0.9371,0.9461,0.9455,0.899,0.1129,0.1358,0.9239,0.0677,0.7204,0.7316,0.9671,0.189,1358068888,33246,0.9956,0.9378,12632,3638,0.0958904109589041,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCAAGTATCTTAGCCC,2357_E03,AIBS +TCGCGCACAATGAAGC-2357_E03,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-378,Human-378,CL:0000003,2357_E03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,VeP,VeP,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9019,0.0361,0.7714,0.2577,0.3266,0.2925,182859.4754,42094.5,0.0036,131177,0.5548,0.9497,0.958,0.9605,0.8916,1343651425,5.2991,0.0102,0.9856,0.864,184821.5689,6951.0,2867.0,0.8679,0.9527,0.9371,0.9461,0.9455,0.899,0.1129,0.1358,0.9239,0.0677,0.7204,0.7316,0.9671,0.189,1358068888,33246,0.9956,0.9378,6598,3197,0.162162162162162,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TCGCGCACAATGAAGC,2357_E03,AIBS +ACTTCGCTCGGGACCT-2357_D03,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Human-498,Human-498,CL:0000003,2357_D03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9011,0.0377,0.7839,0.2363,0.3157,0.2842,130330.5477,32996.0,0.0014,137920,0.4298,0.9469,0.961,0.9572,0.9601,1203602608,5.0156,0.0093,0.9855,0.8684,152136.759,11408.0,3794.0,0.7588,0.9536,0.9391,0.9467,0.9469,0.8993,0.0862,0.131,0.9175,0.0715,0.7149,0.7476,0.9604,0.3505,1404982969,33560,0.9956,0.9465,15326,5340,0.0217391304347826,Homo sapiens,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTCGCTCGGGACCT,2357_D03,AIBS +AAGTTTGTCCGCAACA-2372_C04,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Human-395,Human-395,CL:0000003,2372_C04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8883,0.0282,0.7254,0.2599,0.2977,0.2665,145711.7329,34265.0,0.0053,103218,0.5361,0.9436,0.9552,0.9466,0.9492,1302662892,4.8369,0.0114,0.9838,0.6433,163691.1682,4626.0,2256.5,0.8777,0.9726,0.9526,0.9674,0.972,0.9339,0.1123,0.1508,0.9296,0.0646,0.7143,0.7418,0.9703,0.1755,1463399044,32903,0.9959,0.942,64119,8623,0.222222222222222,Homo sapiens,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGTTTGTCCGCAACA,2372_C04,AIBS +ACACCTTGTCATGAGC-2372_C04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Human-308,Human-308,CL:0000003,2372_C04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8883,0.0282,0.7254,0.2599,0.2977,0.2665,145711.7329,34265.0,0.0053,103218,0.5361,0.9436,0.9552,0.9466,0.9492,1302662892,4.8369,0.0114,0.9838,0.6433,163691.1682,4626.0,2256.5,0.8777,0.9726,0.9526,0.9674,0.972,0.9339,0.1123,0.1508,0.9296,0.0646,0.7143,0.7418,0.9703,0.1755,1463399044,32903,0.9959,0.942,12549,4498,0.0888888888888889,Homo sapiens,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACACCTTGTCATGAGC,2372_C04,AIBS +TATGTGATCCAGGGAG-2372_C04,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Human-549,Human-549,CL:0000003,2372_C04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8883,0.0282,0.7254,0.2599,0.2977,0.2665,145711.7329,34265.0,0.0053,103218,0.5361,0.9436,0.9552,0.9466,0.9492,1302662892,4.8369,0.0114,0.9838,0.6433,163691.1682,4626.0,2256.5,0.8777,0.9726,0.9526,0.9674,0.972,0.9339,0.1123,0.1508,0.9296,0.0646,0.7143,0.7418,0.9703,0.1755,1463399044,32903,0.9959,0.942,96241,10808,0.244444444444444,Homo sapiens,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TATGTGATCCAGGGAG,2372_C04,AIBS +ATAAGCCTCTCAATTC-2372_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Human-528,Human-528,CL:0000003,2372_B04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8888,0.0292,0.6789,0.222,0.2478,0.2203,227577.9301,42667.0,0.004,106971,0.5335,0.9414,0.9571,0.9472,0.8654,1370701873,4.2685,0.0129,0.9841,0.7363,312857.6035,8370.0,3163.0,0.8787,0.9734,0.9547,0.9686,0.9688,0.9781,0.0919,0.1396,0.9088,0.0682,0.701,0.7369,0.9597,0.252,1884341346,33376,0.996,0.9476,58674,7985,0.233333333333333,Homo sapiens,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATAAGCCTCTCAATTC,2372_B04,AIBS +GAGCTTAGTGTTGTGA-2372_B04,Nonneuron,Vascular,VLMC,VLMC,Human-4,Human-4,CL:0000003,2372_B04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8888,0.0292,0.6789,0.222,0.2478,0.2203,227577.9301,42667.0,0.004,106971,0.5335,0.9414,0.9571,0.9472,0.8654,1370701873,4.2685,0.0129,0.9841,0.7363,312857.6035,8370.0,3163.0,0.8787,0.9734,0.9547,0.9686,0.9688,0.9781,0.0919,0.1396,0.9088,0.0682,0.701,0.7369,0.9597,0.252,1884341346,33376,0.996,0.9476,4948,2543,0.0333333333333333,Homo sapiens,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGCTTAGTGTTGTGA,2372_B04,AIBS +GTCATCACACTCGCTC-2372_B04,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-318,Human-318,CL:0000003,2372_B04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8888,0.0292,0.6789,0.222,0.2478,0.2203,227577.9301,42667.0,0.004,106971,0.5335,0.9414,0.9571,0.9472,0.8654,1370701873,4.2685,0.0129,0.9841,0.7363,312857.6035,8370.0,3163.0,0.8787,0.9734,0.9547,0.9686,0.9688,0.9781,0.0919,0.1396,0.9088,0.0682,0.701,0.7369,0.9597,0.252,1884341346,33376,0.996,0.9476,93451,10034,0.216666666666667,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCATCACACTCGCTC,2372_B04,AIBS +CGGACCTAGACAGGCG-2355_A02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-363,Human-363,CL:0000003,2355_A02,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9025,0.0408,0.8198,0.2534,0.354,0.3176,205975.3969,31434.5,0.002,148167,0.6273,0.9542,0.9573,0.9595,0.947,1504444299,5.4499,0.014,0.9863,0.9014,161842.4276,11926.0,3710.5,0.7257,0.9527,0.9371,0.9448,0.9306,0.9044,0.1595,0.1411,0.9298,0.0667,0.722,0.6926,0.9676,0.2679,1182097091,33588,0.9955,0.9217,11994,4599,0.0,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGACCTAGACAGGCG,2355_A02,AIBS +AAGCCTTAGTCATCCC-2389_A04,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Human-386,Human-386,CL:0000003,2389_A04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8924,0.032,0.6722,0.2229,0.2606,0.231,407133.4074,39466.5,0.0032,117845,0.661,0.912,0.9351,0.9237,0.9227,-1788654040,4.3757,0.0155,0.9808,0.6739,229486.4557,8228.5,3156.5,0.6326,0.9488,0.9332,0.9382,0.9571,0.9462,0.1896,0.1306,0.9052,0.0657,0.7089,0.6385,0.9534,0.2897,1412718621,33778,0.9952,0.9071,81134,10340,0.129032258064516,Homo sapiens,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGCCTTAGTCATCCC,2389_A04,AIBS +ACACTTGCAGGACCAA-2389_A04,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Human-121,Human-121,CL:0000003,2389_A04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8924,0.032,0.6722,0.2229,0.2606,0.231,407133.4074,39466.5,0.0032,117845,0.661,0.912,0.9351,0.9237,0.9227,-1788654040,4.3757,0.0155,0.9808,0.6739,229486.4557,8228.5,3156.5,0.6326,0.9488,0.9332,0.9382,0.9571,0.9462,0.1896,0.1306,0.9052,0.0657,0.7089,0.6385,0.9534,0.2897,1412718621,33778,0.9952,0.9071,88698,10616,0.129032258064516,Homo sapiens,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,ACACTTGCAGGACCAA,2389_A04,AIBS +GAGATAAGTTTGCTGT-2389_A04,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Human-387,Human-387,CL:0000003,2389_A04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8924,0.032,0.6722,0.2229,0.2606,0.231,407133.4074,39466.5,0.0032,117845,0.661,0.912,0.9351,0.9237,0.9227,-1788654040,4.3757,0.0155,0.9808,0.6739,229486.4557,8228.5,3156.5,0.6326,0.9488,0.9332,0.9382,0.9571,0.9462,0.1896,0.1306,0.9052,0.0657,0.7089,0.6385,0.9534,0.2897,1412718621,33778,0.9952,0.9071,88617,9462,0.129032258064516,Homo sapiens,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GAGATAAGTTTGCTGT,2389_A04,AIBS +GCATTAGGTCTTACTA-2389_A04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-556,Human-556,CL:0000003,2389_A04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8924,0.032,0.6722,0.2229,0.2606,0.231,407133.4074,39466.5,0.0032,117845,0.661,0.912,0.9351,0.9237,0.9227,-1788654040,4.3757,0.0155,0.9808,0.6739,229486.4557,8228.5,3156.5,0.6326,0.9488,0.9332,0.9382,0.9571,0.9462,0.1896,0.1306,0.9052,0.0657,0.7089,0.6385,0.9534,0.2897,1412718621,33778,0.9952,0.9071,67438,9142,0.032258064516129,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCATTAGGTCTTACTA,2389_A04,AIBS +TACGCTTGTCACCAAA-2389_A04,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Human-140,Human-140,CL:0000003,2389_A04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8924,0.032,0.6722,0.2229,0.2606,0.231,407133.4074,39466.5,0.0032,117845,0.661,0.912,0.9351,0.9237,0.9227,-1788654040,4.3757,0.0155,0.9808,0.6739,229486.4557,8228.5,3156.5,0.6326,0.9488,0.9332,0.9382,0.9571,0.9462,0.1896,0.1306,0.9052,0.0657,0.7089,0.6385,0.9534,0.2897,1412718621,33778,0.9952,0.9071,49888,8033,0.0645161290322581,Homo sapiens,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACGCTTGTCACCAAA,2389_A04,AIBS +TTGGCTACAAAGCTAA-2389_A04,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Human-390,Human-390,CL:0000003,2389_A04,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8924,0.032,0.6722,0.2229,0.2606,0.231,407133.4074,39466.5,0.0032,117845,0.661,0.912,0.9351,0.9237,0.9227,-1788654040,4.3757,0.0155,0.9808,0.6739,229486.4557,8228.5,3156.5,0.6326,0.9488,0.9332,0.9382,0.9571,0.9462,0.1896,0.1306,0.9052,0.0657,0.7089,0.6385,0.9534,0.2897,1412718621,33778,0.9952,0.9071,55266,8950,0.032258064516129,Homo sapiens,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,TTGGCTACAAAGCTAA,2389_A04,AIBS +CTTCGCGTCCAAGTTA-2370_A03,Nonneuron,Vascular,Pericyte,Pericyte,Human-272,Human-272,CL:0000003,2370_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8977,0.0374,0.8012,0.2354,0.3169,0.2811,193118.5839,32801.0,0.0022,136634,0.5983,0.9468,0.9533,0.9499,0.934,1502848820,4.8177,0.0104,0.9847,0.9163,172156.7949,9567.5,3350.0,0.8105,0.9741,0.9551,0.9679,0.9091,0.9749,0.1359,0.1385,0.9284,0.0696,0.7203,0.7114,0.9647,0.2047,1339724178,33378,0.996,0.9365,3880,1857,0.0512820512820513,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTCGCGTCCAAGTTA,2370_A03,AIBS +GATGGACAGGATAAAC-2370_A03,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Human-293,Human-293,CL:0000003,2370_A03,H24.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8977,0.0374,0.8012,0.2354,0.3169,0.2811,193118.5839,32801.0,0.0022,136634,0.5983,0.9468,0.9533,0.9499,0.934,1502848820,4.8177,0.0104,0.9847,0.9163,172156.7949,9567.5,3350.0,0.8105,0.9741,0.9551,0.9679,0.9091,0.9749,0.1359,0.1385,0.9284,0.0696,0.7203,0.7114,0.9647,0.2047,1339724178,33378,0.996,0.9365,43867,7347,0.115384615384615,Homo sapiens,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATGGACAGGATAAAC,2370_A03,AIBS +AAAGCCGCATTGTGTG-1458_A09,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-401,Human-401,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,88001,10680,0.213333333333333,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAAGCCGCATTGTGTG,1458_A09,AIBS +AAAGGACGTACGGTAC-1458_A09,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-394,Human-394,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,44665,9252,0.293333333333333,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAAGGACGTACGGTAC,1458_A09,AIBS +ATGGCCGGTTTCCGGC-1458_A09,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Human-529,Human-529,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,25295,5760,0.157894736842105,Homo sapiens,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATGGCCGGTTTCCGGC,1458_A09,AIBS +CGGACAACATGTTGGC-1458_A09,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Human-397,Human-397,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,46894,8633,0.184210526315789,Homo sapiens,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CGGACAACATGTTGGC,1458_A09,AIBS +CTCAATAAGGAAGTAT-1458_A09,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-392,Human-392,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,41483,9119,0.346666666666667,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTCAATAAGGAAGTAT,1458_A09,AIBS +CTCCATCAGCTTTGTT-1458_A09,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Human-554,Human-554,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,52458,8365,0.157894736842105,Homo sapiens,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCCATCAGCTTTGTT,1458_A09,AIBS +TATTTGGAGGGACTAA-1458_A09,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PVALB GABA,Human-393,Human-393,CL:0000003,1458_A09,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9152,0.019,0.678,0.1807,0.1584,0.136,69623.2779,6326.0,0.0088,70051,0.479,0.909,0.8963,0.9477,0.8975,520016263,3.3673,0.0113,0.9797,0.7321,93308.4965,6524.0,3516.0,0.7132,0.9394,0.943,0.9154,0.9504,0.9268,0.1223,0.2698,0.9238,0.0663,0.5877,0.7249,0.9658,0.104,696921160,32907,0.9994,0.9662,42227,8521,0.24,Homo sapiens,CS20250428_GROUP_0033,Interneuron,PR 2577,SN|GATA3|PVALB|GABA,41,Partanen et al. 2022,aSNpr,,Six3 and Foxp1,#017d7c,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATTTGGAGGGACTAA,1458_A09,AIBS +CACAGGGAGGGTGAAC-1091_A05,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Human-474,Human-474,CL:0000003,1091_A05,H18.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9101,0.0423,0.8623,0.2474,0.3727,0.3422,119512.5505,37746.5,0.0019,153070,0.5639,0.8943,0.9584,0.944,0.8765,818660971,5.5254,0.013,0.9808,0.9676,161190.1545,35442.5,7501.0,0.5839,0.9412,0.9447,0.9256,0.9382,0.8972,0.22,0.1561,0.9095,0.0766,0.6767,0.6029,0.9576,0.2886,1104152558,33912,0.9996,0.9466,5954,3093,0.0,Homo sapiens,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,CACAGGGAGGGTGAAC,1091_A05,AIBS +CTTAGTTTCTAACCAA-1110_A07,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Human-237,Human-237,CL:0000003,1110_A07,H18.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8715,0.0294,0.7732,0.2025,0.2587,0.2306,217464.5336,16245.0,0.0039,105953,0.8268,0.9269,0.9585,0.9575,0.9457,1355891367,4.4175,0.0471,0.9848,0.8924,159069.7817,7591.0,3152.0,0.8097,0.9334,0.9397,0.9129,0.9418,0.8731,0.3679,0.1148,0.909,0.0777,0.7166,0.4558,0.9429,0.0002,991800089,33689,0.9983,0.8003,26254,6269,0.161290322580645,Homo sapiens,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTAGTTTCTAACCAA,1110_A07,AIBS +AAACCGGCACAACAAA-960_B03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-255,Human-255,CL:0000003,960_B03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPeR,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9074,0.0362,0.6403,0.2569,0.323,0.2873,165898.7752,17806.0,0.0038,133038,0.656,0.8898,0.9533,0.9436,0.9176,1172738442,4.8938,0.0244,0.9671,0.5949,222872.13,6149.0,2502.0,0.7619,0.957,0.9585,0.9401,0.9177,0.9614,0.1342,0.1476,0.9101,0.0736,0.6889,0.6916,0.9642,0.2249,1575483087,33525,0.9996,0.9572,21114,5800,0.277777777777778,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCACAACAAA,960_B03,AIBS +AACAAAGGTACTTAGG-960_B03,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Human-544,Human-544,CL:0000003,960_B03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPeR,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9074,0.0362,0.6403,0.2569,0.323,0.2873,165898.7752,17806.0,0.0038,133038,0.656,0.8898,0.9533,0.9436,0.9176,1172738442,4.8938,0.0244,0.9671,0.5949,222872.13,6149.0,2502.0,0.7619,0.957,0.9585,0.9401,0.9177,0.9614,0.1342,0.1476,0.9101,0.0736,0.6889,0.6916,0.9642,0.2249,1575483087,33525,0.9996,0.9572,9708,3843,0.166666666666667,Homo sapiens,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAAAGGTACTTAGG,960_B03,AIBS +AACCCGCAGTGACCTG-960_B03,Nonneuron,Vascular,Pericyte,Pericyte,Human-274,Human-274,CL:0000003,960_B03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPeR,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9074,0.0362,0.6403,0.2569,0.323,0.2873,165898.7752,17806.0,0.0038,133038,0.656,0.8898,0.9533,0.9436,0.9176,1172738442,4.8938,0.0244,0.9671,0.5949,222872.13,6149.0,2502.0,0.7619,0.957,0.9585,0.9401,0.9177,0.9614,0.1342,0.1476,0.9101,0.0736,0.6889,0.6916,0.9642,0.2249,1575483087,33525,0.9996,0.9572,6652,2525,0.0833333333333333,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACCCGCAGTGACCTG,960_B03,AIBS +AACTAGTGTCATAAGT-960_B03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Human-257,Human-257,CL:0000003,960_B03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPeR,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9074,0.0362,0.6403,0.2569,0.323,0.2873,165898.7752,17806.0,0.0038,133038,0.656,0.8898,0.9533,0.9436,0.9176,1172738442,4.8938,0.0244,0.9671,0.5949,222872.13,6149.0,2502.0,0.7619,0.957,0.9585,0.9401,0.9177,0.9614,0.1342,0.1476,0.9101,0.0736,0.6889,0.6916,0.9642,0.2249,1575483087,33525,0.9996,0.9572,3708,2012,0.138888888888889,Homo sapiens,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTAGTGTCATAAGT,960_B03,AIBS +ATGAGCCGTCATTGTC-960_B03,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Human-117,Human-117,CL:0000003,960_B03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPeR,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9074,0.0362,0.6403,0.2569,0.323,0.2873,165898.7752,17806.0,0.0038,133038,0.656,0.8898,0.9533,0.9436,0.9176,1172738442,4.8938,0.0244,0.9671,0.5949,222872.13,6149.0,2502.0,0.7619,0.957,0.9585,0.9401,0.9177,0.9614,0.1342,0.1476,0.9101,0.0736,0.6889,0.6916,0.9642,0.2249,1575483087,33525,0.9996,0.9572,3989,2181,0.0555555555555556,Homo sapiens,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,ATGAGCCGTCATTGTC,960_B03,AIBS +CTGTACCTCATGCTAA-960_B03,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Human-143,Human-143,CL:0000003,960_B03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPeR,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9074,0.0362,0.6403,0.2569,0.323,0.2873,165898.7752,17806.0,0.0038,133038,0.656,0.8898,0.9533,0.9436,0.9176,1172738442,4.8938,0.0244,0.9671,0.5949,222872.13,6149.0,2502.0,0.7619,0.957,0.9585,0.9401,0.9177,0.9614,0.1342,0.1476,0.9101,0.0736,0.6889,0.6916,0.9642,0.2249,1575483087,33525,0.9996,0.9572,48852,5590,0.309859154929577,Homo sapiens,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTGTACCTCATGCTAA,960_B03,AIBS +CCGTTGCGTGCAATAT-980_C02,Nonneuron,Vascular,Pericyte,Pericyte,Human-271,Human-271,CL:0000003,980_C02,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaT,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9131,0.0328,0.8611,0.1988,0.2559,0.2284,89801.8885,18535.0,0.0032,119417,0.4646,0.9228,0.966,0.9589,0.9577,992041462,4.2541,0.0123,0.9865,0.8724,115432.7746,13824.0,4916.0,0.6731,0.9614,0.9632,0.9371,0.9266,0.9646,0.2336,0.1756,0.9018,0.0688,0.6575,0.59,0.9583,0.1988,1275185861,33812,0.9994,0.9287,7930,3291,0.0,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCGTTGCGTGCAATAT,980_C02,AIBS +GCTTCGCGTCTTACTA-1110_B07,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-454,Human-454,CL:0000003,1110_B07,H18.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8755,0.0306,0.8191,0.2139,0.2684,0.241,136421.089,16656.0,0.0063,110112,0.7546,0.9234,0.9631,0.9556,0.9239,992872686,4.6782,0.0454,0.9845,0.8869,128790.0559,7848.0,3230.5,0.7594,0.9382,0.9431,0.915,0.9377,0.9206,0.3642,0.1183,0.9153,0.0772,0.7198,0.4659,0.949,0.0001,937334027,33652,0.9984,0.8132,5755,2670,0.0,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTTCGCGTCTTACTA,1110_B07,AIBS +CTAGATTCAGGCGAGT-988_C05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-352,Human-352,CL:0000003,988_C05,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaT,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9157,0.0257,0.7145,0.2032,0.2095,0.1885,150925.0014,31477.5,0.003,94152,0.514,0.904,0.9434,0.9487,0.9199,1053154660,4.0567,0.0085,0.9802,0.721,198924.9572,20556.5,5245.0,0.6618,0.9615,0.9629,0.9446,0.9588,0.9548,0.1198,0.1407,0.9057,0.0719,0.6931,0.7019,0.9651,0.2744,1388098351,33928,0.9995,0.9499,28321,6212,0.0571428571428571,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAGATTCAGGCGAGT,988_C05,AIBS +GGGCATGAGACTATTG-988_C05,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Human-356,Human-356,CL:0000003,988_C05,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaT,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9157,0.0257,0.7145,0.2032,0.2095,0.1885,150925.0014,31477.5,0.003,94152,0.514,0.904,0.9434,0.9487,0.9199,1053154660,4.0567,0.0085,0.9802,0.721,198924.9572,20556.5,5245.0,0.6618,0.9615,0.9629,0.9446,0.9588,0.9548,0.1198,0.1407,0.9057,0.0719,0.6931,0.7019,0.9651,0.2744,1388098351,33928,0.9995,0.9499,58954,9529,0.285714285714286,Homo sapiens,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGCATGAGACTATTG,988_C05,AIBS +TGTCCTGGTCCAAGAC-988_C05,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Human-312,Human-312,CL:0000003,988_C05,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,CaT,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9157,0.0257,0.7145,0.2032,0.2095,0.1885,150925.0014,31477.5,0.003,94152,0.514,0.904,0.9434,0.9487,0.9199,1053154660,4.0567,0.0085,0.9802,0.721,198924.9572,20556.5,5245.0,0.6618,0.9615,0.9629,0.9446,0.9588,0.9548,0.1198,0.1407,0.9057,0.0719,0.6931,0.7019,0.9651,0.2744,1388098351,33928,0.9995,0.9499,37054,6806,0.228571428571429,Homo sapiens,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTCCTGGTCCAAGAC,988_C05,AIBS +ATGACCAGTAGCTGGT-930_B05,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Human-511,Human-511,CL:0000003,930_B05,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9091,0.0314,0.8715,0.1898,0.2319,0.2072,310786.6756,80846.5,0.0014,115131,0.6624,0.9041,0.9544,0.9448,0.941,977113308,3.6364,0.0181,0.9808,0.8938,395531.3177,64075.5,7949.5,0.7326,0.9591,0.963,0.9239,0.9697,0.9544,0.1045,0.1279,0.9157,0.0736,0.7142,0.7249,0.959,0.25,1243550463,33114,0.9996,0.9621,69741,8179,0.0,Homo sapiens,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGACCAGTAGCTGGT,930_B05,AIBS +AGGTATTGTACTTCAC-1001_A06,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Human-437,Human-437,CL:0000003,1001_A06,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.904,0.0355,0.6262,0.2918,0.3737,0.3427,97689.9606,16000.0,0.006,130008,0.5264,0.8955,0.956,0.9469,0.9374,522738979,5.3233,0.0187,0.9806,0.4353,182608.4472,6872.0,2885.0,0.7059,0.9601,0.9624,0.9418,0.9205,0.9657,0.1436,0.1716,0.8364,0.0708,0.5939,0.6128,0.9271,0.4275,977137801,32849,0.9995,0.9509,57126,10645,0.12962962962963,Homo sapiens,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTATTGTACTTCAC,1001_A06,AIBS +CCTGGTAAGGAAGCAC-1001_A06,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Human-438,Human-438,CL:0000003,1001_A06,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.904,0.0355,0.6262,0.2918,0.3737,0.3427,97689.9606,16000.0,0.006,130008,0.5264,0.8955,0.956,0.9469,0.9374,522738979,5.3233,0.0187,0.9806,0.4353,182608.4472,6872.0,2885.0,0.7059,0.9601,0.9624,0.9418,0.9205,0.9657,0.1436,0.1716,0.8364,0.0708,0.5939,0.6128,0.9271,0.4275,977137801,32849,0.9995,0.9509,38292,8364,0.0740740740740741,Homo sapiens,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTGGTAAGGAAGCAC,1001_A06,AIBS +CATTATGAGAGAAGGG-930_D05,Nonneuron,Vascular,Pericyte,Pericyte,Human-273,Human-273,CL:0000003,930_D05,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,PuC,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9238,0.0376,0.9059,0.2105,0.2945,0.2618,96720.5049,34033.5,0.0045,138200,0.5241,0.9232,0.9639,0.9505,0.9324,1020594768,4.1345,0.0075,0.9793,0.9249,89319.1471,26210.5,5915.5,0.4876,0.9594,0.9636,0.9235,0.9669,0.937,0.131,0.1617,0.9065,0.0742,0.6706,0.6902,0.9609,0.3161,942495640,33546,0.9996,0.9576,3746,2008,0.0,Homo sapiens,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATTATGAGAGAAGGG,930_D05,AIBS +TTGGCTGAGGCGAATA-1042_A06,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Human-262,Human-262,CL:0000003,1042_A06,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9156,0.0336,0.8411,0.1979,0.252,0.2256,150377.7052,56008.0,0.0016,122793,0.511,0.9058,0.962,0.9489,0.9351,1064072642,3.9121,0.0094,0.9823,0.901,170257.1665,33236.5,6937.5,0.6508,0.9739,0.9759,0.9618,0.9592,0.9757,0.1916,0.1435,0.9306,0.0778,0.7093,0.6501,0.9706,0.087,1204739710,33386,0.9994,0.9499,51045,8717,0.0563380281690141,Homo sapiens,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGGCTGAGGCGAATA,1042_A06,AIBS +AAGGATCCAAACGCGA-994_C03,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Human-380,Human-380,CL:0000003,994_C03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8941,0.0366,0.6859,0.3018,0.3885,0.3485,29479.2214,4262.0,0.0048,134514,0.4669,0.8785,0.9543,0.9443,0.8951,589584428,5.7029,0.0318,0.9483,0.5889,55843.8322,2159.0,1412.0,0.7209,0.9719,0.9736,0.9579,0.9852,0.9595,0.1134,0.1542,0.8843,0.0696,0.6605,0.6909,0.9601,0.3091,1116876644,33225,0.9996,0.9556,8253,3906,0.2,Homo sapiens,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,AAGGATCCAAACGCGA,994_C03,AIBS +GAGCTGCTCAAGCCTG-994_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-250,Human-250,CL:0000003,994_C03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8941,0.0366,0.6859,0.3018,0.3885,0.3485,29479.2214,4262.0,0.0048,134514,0.4669,0.8785,0.9543,0.9443,0.8951,589584428,5.7029,0.0318,0.9483,0.5889,55843.8322,2159.0,1412.0,0.7209,0.9719,0.9736,0.9579,0.9852,0.9595,0.1134,0.1542,0.8843,0.0696,0.6605,0.6909,0.9601,0.3091,1116876644,33225,0.9996,0.9556,6580,3124,0.19,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGCTGCTCAAGCCTG,994_C03,AIBS +AAAGGCTCATGGAGGC-1169_A01,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Human-376,Human-376,CL:0000003,1169_A01,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9125,0.0252,0.765,0.1825,0.1795,0.1571,75888.0861,20082.0,0.0023,93930,0.4014,0.9149,0.9606,0.9559,0.9272,843799629,3.5493,0.0126,0.987,0.7787,35804.0576,9143.0,3576.0,0.2201,0.9467,0.9464,0.9248,0.9339,0.8807,0.1483,0.1604,0.9076,0.0673,0.6799,0.6815,0.9621,0.2159,398105316,33114,0.9996,0.9515,27905,6012,0.06,Homo sapiens,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AAAGGCTCATGGAGGC,1169_A01,AIBS +AACTCACAGGAGGACT-1169_A01,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Human-388,Human-388,CL:0000003,1169_A01,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9125,0.0252,0.765,0.1825,0.1795,0.1571,75888.0861,20082.0,0.0023,93930,0.4014,0.9149,0.9606,0.9559,0.9272,843799629,3.5493,0.0126,0.987,0.7787,35804.0576,9143.0,3576.0,0.2201,0.9467,0.9464,0.9248,0.9339,0.8807,0.1483,0.1604,0.9076,0.0673,0.6799,0.6815,0.9621,0.2159,398105316,33114,0.9996,0.9515,11403,4858,0.08,Homo sapiens,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AACTCACAGGAGGACT,1169_A01,AIBS +AGAAACTAGGTGAAGC-1169_A01,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Human-389,Human-389,CL:0000003,1169_A01,H20.30.002,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9125,0.0252,0.765,0.1825,0.1795,0.1571,75888.0861,20082.0,0.0023,93930,0.4014,0.9149,0.9606,0.9559,0.9272,843799629,3.5493,0.0126,0.987,0.7787,35804.0576,9143.0,3576.0,0.2201,0.9467,0.9464,0.9248,0.9339,0.8807,0.1483,0.1604,0.9076,0.0673,0.6799,0.6815,0.9621,0.2159,398105316,33114,0.9996,0.9515,5168,2511,0.02,Homo sapiens,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGAAACTAGGTGAAGC,1169_A01,AIBS +AACGCCCAGACAAAGT-1279_B07,Nonneuron,Immune,Microglia,Microglia,Human-111,Human-111,CL:0000003,1279_B07,H19.30.004,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9125,0.036,0.7314,0.3183,0.4248,0.3768,298791.8285,33124.0,0.0044,131586,0.6745,0.8948,0.9342,0.9512,0.8776,1104633390,5.3439,0.0239,0.982,0.5708,337891.3538,10591.0,3358.0,0.8406,0.9508,0.9543,0.931,0.9693,0.9258,0.1394,0.1699,0.8856,0.0625,0.6532,0.6743,0.952,0.2082,1249184335,32241,0.9996,0.9574,7974,2748,0.0,Homo sapiens,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACGCCCAGACAAAGT,1279_B07,AIBS +AGGATTGAGTCAGGCC-1482_A03,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Human-429,Human-429,CL:0000003,1482_A03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.922,0.0302,0.8,0.234,0.2643,0.2347,122516.5001,28149.0,0.0048,110916,0.5453,0.9281,0.9678,0.9559,0.9545,851734709,4.6515,0.0076,0.9817,0.8332,78975.8087,10585.0,3440.0,0.4716,0.9476,0.9493,0.9344,0.9521,0.9402,0.1109,0.1558,0.9156,0.0691,0.6907,0.7243,0.9668,0.237,549039822,33302,0.9993,0.9558,33315,7146,0.0571428571428571,Homo sapiens,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGGATTGAGTCAGGCC,1482_A03,AIBS +GCGCTTAAGGCCTAAT-1482_A03,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Human-408,Human-408,CL:0000003,1482_A03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.922,0.0302,0.8,0.234,0.2643,0.2347,122516.5001,28149.0,0.0048,110916,0.5453,0.9281,0.9678,0.9559,0.9545,851734709,4.6515,0.0076,0.9817,0.8332,78975.8087,10585.0,3440.0,0.4716,0.9476,0.9493,0.9344,0.9521,0.9402,0.1109,0.1558,0.9156,0.0691,0.6907,0.7243,0.9668,0.237,549039822,33302,0.9993,0.9558,58030,8599,0.271428571428571,Homo sapiens,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGCTTAAGGCCTAAT,1482_A03,AIBS +GCTAACCCATCCGTAA-1482_A03,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Human-118,Human-118,CL:0000003,1482_A03,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.922,0.0302,0.8,0.234,0.2643,0.2347,122516.5001,28149.0,0.0048,110916,0.5453,0.9281,0.9678,0.9559,0.9545,851734709,4.6515,0.0076,0.9817,0.8332,78975.8087,10585.0,3440.0,0.4716,0.9476,0.9493,0.9344,0.9521,0.9402,0.1109,0.1558,0.9156,0.0691,0.6907,0.7243,0.9668,0.237,549039822,33302,0.9993,0.9558,68252,10183,0.185714285714286,Homo sapiens,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,GCTAACCCATCCGTAA,1482_A03,AIBS +GCCTACTTCCGGAACC-1468_A09,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Human-396,Human-396,CL:0000003,1468_A09,H19.30.004,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9179,0.0264,0.4821,0.2542,0.2933,0.2578,138905.6595,22118.0,0.0036,97181,0.4366,0.911,0.896,0.9523,0.9439,712586033,4.0914,0.0125,0.9796,0.348,183449.4211,4515.0,2138.5,0.7901,0.942,0.9454,0.9214,0.9584,0.886,0.1622,0.2152,0.9299,0.069,0.6458,0.6885,0.9681,0.0763,941095530,32084,0.9992,0.9552,53023,8246,0.176470588235294,Homo sapiens,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCCTACTTCCGGAACC,1468_A09,AIBS +ATTGGCTAGTAAGAAC-1233_A02,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Human-134,Human-134,CL:0000003,1233_A02,H20.30.001,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9043,0.0277,0.657,0.1852,0.2004,0.1767,131023.0628,15504.5,0.0056,101971,0.6475,0.9044,0.9666,0.954,0.9212,1014118506,3.6541,0.016,0.9855,0.6773,74788.7388,4511.0,2334.0,0.5333,0.9316,0.9367,0.9112,0.9394,0.9123,0.3607,0.1129,0.9128,0.0765,0.7234,0.4672,0.9513,0.0001,578864838,32849,0.9989,0.8411,20092,5254,0.194805194805195,Homo sapiens,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTGGCTAGTAAGAAC,1233_A02,AIBS +GCTGGTTCAATCCCTT-2289_D04,Nonneuron,OPC-Oligo,OPC,OPC,Human-180,Human-180,CL:0000003,2289_D04,H24.30.003,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPe,GPe,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9132,0.0399,0.8687,0.2407,0.3195,0.2883,75084.3496,25869.0,0.0053,146176,0.2969,0.8945,0.9385,0.934,0.8844,858889875,5.0859,0.0082,0.9711,0.8711,114169.5576,2519.0,1500.0,0.8915,0.9719,0.9628,0.9594,0.9835,0.957,0.1057,0.1578,0.9193,0.0698,0.6918,0.7323,0.9651,0.1539,1305985569,32964,0.9979,0.947,14067,4796,0.04,Homo sapiens,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCTGGTTCAATCCCTT,2289_D04,AIBS +ACCTTCCAGCGGGCAA-2328_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-495,Human-495,CL:0000003,2328_C03,H24.30.003,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.9027,0.0332,0.8557,0.2304,0.2695,0.2421,134111.9566,30824.5,0.008,122377,0.4733,0.9139,0.9452,0.9398,0.9347,1214517879,5.0311,0.0108,0.9771,0.8683,140797.4492,7134.5,2796.5,0.6142,0.9765,0.9666,0.9612,0.9752,0.9802,0.1219,0.1293,0.9119,0.0705,0.7122,0.7073,0.9559,0.3263,1275061700,34095,0.9984,0.9362,75254,9797,0.21978021978022,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTCCAGCGGGCAA,2328_C03,AIBS +AAATGCCTCCTTGCAC-2440_1_D02,Subpallium GABA,F M GABA,SN PAX7 GABA,SN SEMA5A GABA,Human-138,Human-138,CL:0000003,2440_1_D02,H24.30.003,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8808,0.0295,0.4993,0.213,0.2292,0.2075,140859.5997,20733.0,0.0034,110247,0.3634,0.9174,0.9371,0.9281,0.9069,1401834736,3.8376,0.0154,0.9812,0.3946,117899.9447,3354.5,1934.5,0.5731,0.9552,0.9422,0.9551,0.9213,0.9138,0.1862,0.127,0.9056,0.0713,0.7074,0.6368,0.9609,0.3475,1173340250,33575,0.9953,0.9269,56592,8079,0.22,Homo sapiens,CS20250428_GROUP_0034,Interneuron,,SN|SEMA5A|GABA,45,,,,,#3604fb,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATGCCTCCTTGCAC,2440_1_D02,AIBS +AACTCACAGTTACCGG-2440_1_D02,Subpallium GABA,F M GABA,SN PAX7 GABA,SN SEMA5A GABA,Human-434,Human-434,CL:0000003,2440_1_D02,H24.30.003,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8808,0.0295,0.4993,0.213,0.2292,0.2075,140859.5997,20733.0,0.0034,110247,0.3634,0.9174,0.9371,0.9281,0.9069,1401834736,3.8376,0.0154,0.9812,0.3946,117899.9447,3354.5,1934.5,0.5731,0.9552,0.9422,0.9551,0.9213,0.9138,0.1862,0.127,0.9056,0.0713,0.7074,0.6368,0.9609,0.3475,1173340250,33575,0.9953,0.9269,35994,7166,0.24,Homo sapiens,CS20250428_GROUP_0034,Interneuron,,SN|SEMA5A|GABA,45,,,,,#3604fb,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTCACAGTTACCGG,2440_1_D02,AIBS +CTAAGTCAGTGAAGTG-2440_1_D02,Subpallium GABA,F M GABA,SN PAX7 GABA,SN SEMA5A GABA,Human-135,Human-135,CL:0000003,2440_1_D02,H24.30.003,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8808,0.0295,0.4993,0.213,0.2292,0.2075,140859.5997,20733.0,0.0034,110247,0.3634,0.9174,0.9371,0.9281,0.9069,1401834736,3.8376,0.0154,0.9812,0.3946,117899.9447,3354.5,1934.5,0.5731,0.9552,0.9422,0.9551,0.9213,0.9138,0.1862,0.127,0.9056,0.0713,0.7074,0.6368,0.9609,0.3475,1173340250,33575,0.9953,0.9269,13679,4561,0.19,Homo sapiens,CS20250428_GROUP_0034,Interneuron,,SN|SEMA5A|GABA,45,,,,,#3604fb,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAAGTCAGTGAAGTG,2440_1_D02,AIBS +AGGCAGGTCTGTGAGT-2344_A05,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Human-251,Human-251,CL:0000003,2344_A05,H24.30.003,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8951,0.0314,0.6808,0.2147,0.2417,0.2195,91870.5805,21712.0,0.0056,116608,0.3019,0.9088,0.9506,0.9392,0.9205,1071119098,4.5294,0.0101,0.9754,0.7138,83334.2247,4762.0,2333.0,0.4453,0.9449,0.9378,0.9309,0.7898,0.8987,0.1104,0.1268,0.9008,0.0706,0.7033,0.7079,0.9493,0.4046,971593726,33874,0.9984,0.9297,15490,4740,0.16,Homo sapiens,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGCAGGTCTGTGAGT,2344_A05,AIBS +AACCTTAAGGTTACGT-2393_C06,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Human-120,Human-120,CL:0000003,2393_C06,H24.30.004,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8843,0.0296,0.683,0.2401,0.2797,0.2534,30116.393,4656.5,0.0117,109378,0.4861,0.9143,0.9336,0.9261,0.8993,602327859,4.7898,0.022,0.9821,0.5225,38411.5978,1899.0,1201.0,0.694,0.9507,0.9353,0.939,0.9461,0.9112,0.1515,0.1223,0.9011,0.0671,0.7117,0.6711,0.9459,0.325,768231955,32374,0.9952,0.9218,43653,8606,0.33,Homo sapiens,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AACCTTAAGGTTACGT,2393_C06,AIBS +AACATTGTCCTCAGTC-2414_E01,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Human-136,Human-136,CL:0000003,2414_E01,H24.30.004,10x multiome,EFO_0030059,Human,NCBITaxon:9606,Adult,SN,SN-VTA,Unknown,Unknown,Female,PATO:0000383,unknown,Homo sapiens,normal,PATO:0000461,nucleus,True,0.8789,0.0264,0.6231,0.2032,0.2086,0.1873,205396.7573,38133.5,0.004,97936,0.4464,0.9158,0.9394,0.9367,0.9177,1203624998,3.8881,0.0139,0.9798,0.7287,195326.5391,11316.0,4072.5,0.5558,0.9546,0.9417,0.9541,0.9052,0.9676,0.1251,0.1227,0.9067,0.0719,0.7121,0.6971,0.9552,0.4154,1144613519,33908,0.9945,0.9348,95551,10590,0.186440677966102,Homo sapiens,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACATTGTCCTCAGTC,2414_E01,AIBS diff --git a/bkbit/data/ait_output/Macaque_cluster_info.pkl b/bkbit/data/ait_output/Macaque_cluster_info.pkl new file mode 100644 index 0000000..963ffc6 Binary files /dev/null and b/bkbit/data/ait_output/Macaque_cluster_info.pkl differ diff --git a/bkbit/data/ait_output/Macaque_taxonomy.csv b/bkbit/data/ait_output/Macaque_taxonomy.csv new file mode 100644 index 0000000..3b8b6d4 --- /dev/null +++ b/bkbit/data/ait_output/Macaque_taxonomy.csv @@ -0,0 +1,389 @@ +cell_label,Neighborhood,Class,Subclass,Group,Cluster,cluster_id,cell_type_ontology_term,load_id,donor_id,assay,assay_ontology_term_id,organism,organism_ontology_term_id,development_stage,anatomical_region,anatomical_region_merged,anatomical_region_ontology_term_id,brain_region_ontology_term_id,self_reported_sex,self_reported_sex_ontology_term_id,self_reported_ethnicity,self_reported_ethnicity_ontology_term_id,disease,disease_ontology_term_id,suspension_type,is_primary_data,atac_confidently_mapped_read_pairs,atac_fraction_of_genome_in_peaks,atac_fraction_of_high_quality_fragments_in_cells,atac_fraction_of_high_quality_fragments_overlapping_tss,atac_fraction_of_high_quality_fragments_overlapping_peaks,atac_fraction_of_transposition_events_in_peaks_in_cells,atac_mean_raw_read_pairs_per_cell,atac_median_high_quality_fragments_per_cell,atac_non_nuclear_read_pairs,atac_number_of_peaks,atac_percent_duplicates,atac_q30_bases_in_barcode,atac_q30_bases_in_read_1,atac_q30_bases_in_read_2,atac_q30_bases_in_sample_index_i1,atac_sequenced_read_pairs,atac_tss_enrichment_score,atac_unmapped_read_pairs,atac_valid_barcodes,gex_fraction_of_transcriptomic_reads_in_cells,gex_mean_raw_reads_per_cell,gex_median_umi_counts_per_cell,gex_median_genes_per_cell,gex_percent_duplicates,gex_q30_bases_in_umi,gex_q30_bases_in_barcode,gex_q30_bases_in_read_2,gex_q30_bases_in_sample_index_i1,gex_q30_bases_in_sample_index_i2,gex_reads_mapped_antisense_to_gene,gex_reads_mapped_confidently_to_exonic_regions,gex_reads_mapped_confidently_to_genome,gex_reads_mapped_confidently_to_intergenic_regions,gex_reads_mapped_confidently_to_intronic_regions,gex_reads_mapped_confidently_to_transcriptome,gex_reads_mapped_to_genome,gex_reads_with_tso,gex_sequenced_read_pairs,gex_total_genes_detected,gex_valid_umis,gex_valid_barcodes,total_counts,total_genes,doublet_score,organism_sci,accession_group,embedding_set,CL:ID_group,tokens_group,display_order_group,literature_support,literature_name_short,literature_name_long,curated_markers,color_hex_group,color_group,accession_subclass,CL:ID_subclass,tokens_subclass,display_order_subclass,color_hex_subclass,color_subclass,accession_class,CL:ID_class,tokens_class,display_order_class,color_hex_class,color_class,accession_neighborhood,CL:ID_neighborhood,tokens_neighborhood,display_order_neighborhood,color_hex_neighborhood,color_neighborhood,cell_barcode,barcoded_cell_sample_label,alignment_job_database +AAACAGCCAGTTGCGT-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-1,Macaque-1,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14195,4639,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACAGCCAGTTGCGT,1061_B04,AIBS +AAACATGCAATTGACT-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-18,Macaque-18,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4441,2507,0.0,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACATGCAATTGACT,1061_B04,AIBS +AAACATGCACGTTACA-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-35,Macaque-35,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10473,3808,0.0,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACATGCACGTTACA,1061_B04,AIBS +AAACATGCAGGTTACC-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-31,Macaque-31,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,11817,4080,0.0,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACATGCAGGTTACC,1061_B04,AIBS +AAACCAACAATCCTGA-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-33,Macaque-33,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9796,3745,0.0,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCAACAATCCTGA,1061_B04,AIBS +AAACCGCGTTAACACG-1061_B04,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-80,Macaque-80,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7631,3616,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAACCGCGTTAACACG,1061_B04,AIBS +AAACCGGCAAAGGTAC-1061_B04,Subpallium GABA,CN MGE GABA,STR SST GABA,STR SST-ADARB2 GABA,Macaque-87,Macaque-87,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10707,4367,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0042,Interneuron,,STR|SST|ADARB2|GABA,30,,,,,#cfebed,,CS20250428_SUBCL_0032,,STR|SST|GABA,20,#ed8d40,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCAAAGGTAC,1061_B04,AIBS +AAACCGGCAACTAGCC-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-108,Macaque-108,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,22035,5369,0.0727272727272727,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCAACTAGCC,1061_B04,AIBS +AAACCGGCACGTTACA-1061_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-109,Macaque-109,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,30649,7436,0.178571428571429,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCACGTTACA,1061_B04,AIBS +AAACCGGCATTAAGCT-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-88,Macaque-88,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5371,2485,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGGCATTAAGCT,1061_B04,AIBS +AAACGCGCACAGAACG-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Macaque-120,Macaque-120,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6274,3099,0.0,Macaca Mulatta,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGCGCACAGAACG,1061_B04,AIBS +AAACGCGCAGGCTGTT-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Macaque-118,Macaque-118,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4337,2269,0.0,Macaca Mulatta,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGCGCAGGCTGTT,1061_B04,AIBS +AAACGGATCATTAGCA-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-41,Macaque-41,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8125,3386,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGGATCATTAGCA,1061_B04,AIBS +AAACGGATCTTAGGGT-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-2,Macaque-2,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12077,4316,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGGATCTTAGGGT,1061_B04,AIBS +AAACGTACACAAAGGT-1061_B04,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Macaque-152,Macaque-152,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6811,3035,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGTACACAAAGGT,1061_B04,AIBS +AAAGCAAGTCTCAGCC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-170,Macaque-170,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,3613,2084,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCAAGTCTCAGCC,1061_B04,AIBS +AAAGCACCAAAGCTCC-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-5,Macaque-5,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12200,4367,0.0,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCACCAAAGCTCC,1061_B04,AIBS +AAAGCCCGTACCGTAA-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-171,Macaque-171,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,15276,5104,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCCGTACCGTAA,1061_B04,AIBS +AAAGCCCGTCGTAATG-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Macaque-196,Macaque-196,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2580,1561,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGCCCGTCGTAATG,1061_B04,AIBS +AAAGCCCGTGCAACTA-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-6,Macaque-6,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,13330,4503,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCCGTGCAACTA,1061_B04,AIBS +AAAGCGGGTAGGTTGC-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-32,Macaque-32,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5613,2623,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCGGGTAGGTTGC,1061_B04,AIBS +AAAGCGGGTGGATTCA-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-38,Macaque-38,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6364,3056,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCGGGTGGATTCA,1061_B04,AIBS +AAAGGACGTGAAGCCT-1061_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-111,Macaque-111,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7216,3445,0.0,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGACGTGAAGCCT,1061_B04,AIBS +AAAGGAGCAGGCTGTT-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-11,Macaque-11,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8728,3613,0.0,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGAGCAGGCTGTT,1061_B04,AIBS +AAAGGAGCATAAACCT-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Macaque-213,Macaque-213,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,25240,5518,0.145454545454545,Macaca Mulatta,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGAGCATAAACCT,1061_B04,AIBS +AACAGATAGCCGGTAC-1061_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-110,Macaque-110,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,20742,6136,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGATAGCCGGTAC,1061_B04,AIBS +AACAGATAGGCTACTG-1061_B04,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-82,Macaque-82,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,16458,5542,0.0909090909090909,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AACAGATAGGCTACTG,1061_B04,AIBS +AACCCGCAGTGAACGA-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-34,Macaque-34,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12662,4109,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCCGCAGTGAACGA,1061_B04,AIBS +AACCTAATCGTGCTTC-1061_B04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Macaque-214,Macaque-214,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9996,3733,0.0,Macaca Mulatta,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTAATCGTGCTTC,1061_B04,AIBS +AACCTCCTCATTTGTC-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST D1 GABA,Macaque-7,Macaque-7,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12223,4356,0.0,Macaca Mulatta,CS20250428_GROUP_0065,Interneuron,,AMY|SLEA|BNST|D1|GABA,47,,,,,#9e86de,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTCCTCATTTGTC,1061_B04,AIBS +AACCTTGCAATCATGT-1061_B04,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-231,Macaque-231,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2776,1658,0.0,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACCTTGCAATCATGT,1061_B04,AIBS +AACGACAAGGTAGCTT-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-121,Macaque-121,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7601,3501,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACGACAAGGTAGCTT,1061_B04,AIBS +AACGCTAGTAAGCTCA-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-30,Macaque-30,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8554,3688,0.0,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACGCTAGTAAGCTCA,1061_B04,AIBS +AACTAGCTCTGGCATG-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-237,Macaque-237,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4444,2325,0.0,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTAGCTCTGGCATG,1061_B04,AIBS +AACTAGTGTAATAACC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-174,Macaque-174,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,25747,6744,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTAGTGTAATAACC,1061_B04,AIBS +AACTCACAGTCGCTAG-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-153,Macaque-153,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6263,2588,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTCACAGTCGCTAG,1061_B04,AIBS +AACTGTTCAACCTGGT-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-39,Macaque-39,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8142,3258,0.0,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTGTTCAACCTGGT,1061_B04,AIBS +AACTGTTCAACTGGCT-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Macaque-251,Macaque-251,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,20774,5307,0.142857142857143,Macaca Mulatta,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTGTTCAACTGGCT,1061_B04,AIBS +AACTGTTCAGCTTAAT-1061_B04,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-257,Macaque-257,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6460,2910,0.178571428571429,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACTGTTCAGCTTAAT,1061_B04,AIBS +AACTGTTCATCCCTCA-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-23,Macaque-23,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5148,2500,0.0,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTGTTCATCCCTCA,1061_B04,AIBS +AAGACAAGTTAGAGGG-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Macaque-258,Macaque-258,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14413,4172,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGACAAGTTAGAGGG,1061_B04,AIBS +AAGACAAGTTTGCGAA-1061_B04,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-83,Macaque-83,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9698,4227,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGACAAGTTTGCGAA,1061_B04,AIBS +AAGCATGAGCATCCAG-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-260,Macaque-260,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8046,3353,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCATGAGCATCCAG,1061_B04,AIBS +AAGCATGAGGTCGAGG-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-239,Macaque-239,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8695,3726,0.0,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCATGAGGTCGAGG,1061_B04,AIBS +AAGCCACGTAGTTAAC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-172,Macaque-172,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,20856,5594,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCACGTAGTTAAC,1061_B04,AIBS +AAGCCTGTCTACTAAG-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-19,Macaque-19,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,11941,4606,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTGTCTACTAAG,1061_B04,AIBS +AAGCCTTAGATACTTG-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-20,Macaque-20,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,24487,6255,0.2,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTTAGATACTTG,1061_B04,AIBS +AAGCGTTTCATTGCAA-1061_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Macaque-269,Macaque-269,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,28493,6513,0.0909090909090909,Macaca Mulatta,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCGTTTCATTGCAA,1061_B04,AIBS +AAGCTAGAGGATCACT-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-21,Macaque-21,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,13936,5183,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCTAGAGGATCACT,1061_B04,AIBS +AAGCTAGAGGTCCAAT-1061_B04,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-81,Macaque-81,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14047,4943,0.0,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGCTAGAGGTCCAAT,1061_B04,AIBS +AAGCTATGTTGTTGGA-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-175,Macaque-175,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9160,3945,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCTATGTTGTTGGA,1061_B04,AIBS +AAGCTCCCAATGCCCG-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-36,Macaque-36,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,13041,4129,0.0,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCTCCCAATGCCCG,1061_B04,AIBS +AAGGAAGCACCGTTCC-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-241,Macaque-241,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10283,3754,0.0,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGAAGCACCGTTCC,1061_B04,AIBS +AAGTAGCCAGCCTAAC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-89,Macaque-89,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,29160,7066,0.2,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTAGCCAGCCTAAC,1061_B04,AIBS +AATACCGGTAACCACA-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Macaque-200,Macaque-200,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2385,1400,0.0,Macaca Mulatta,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATACCGGTAACCACA,1061_B04,AIBS +AATATCCCAACTGGGA-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Macaque-280,Macaque-280,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2000,1182,0.0,Macaca Mulatta,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATATCCCAACTGGGA,1061_B04,AIBS +AATCCATCAACAGGTG-1061_B04,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Macaque-285,Macaque-285,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9839,4020,0.109090909090909,Macaca Mulatta,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATCCATCAACAGGTG,1061_B04,AIBS +AATGCGCGTCCGTGAG-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-22,Macaque-22,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6711,3271,0.0,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATGCGCGTCCGTGAG,1061_B04,AIBS +AATTACCCACCCTCAC-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Macaque-195,Macaque-195,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5409,2596,0.109090909090909,Macaca Mulatta,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATTACCCACCCTCAC,1061_B04,AIBS +AATTGGACACTGACTA-1061_B04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Macaque-215,Macaque-215,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12924,4699,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGGACACTGACTA,1061_B04,AIBS +AATTGTGTCACCATTT-1061_B04,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-286,Macaque-286,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,13206,4817,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGTGTCACCATTT,1061_B04,AIBS +AATTGTGTCGCAGGCT-1061_B04,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-293,Macaque-293,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,18826,6566,0.107142857142857,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGTGTCGCAGGCT,1061_B04,AIBS +AATTTCCTCAGTTCCC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-176,Macaque-176,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4540,2459,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTTCCTCAGTTCCC,1061_B04,AIBS +AATTTGGTCCTAAGAC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-94,Macaque-94,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8656,3922,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTTGGTCCTAAGAC,1061_B04,AIBS +ACAACACTCGGTTACG-1061_B04,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-287,Macaque-287,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6963,3350,0.0,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAACACTCGGTTACG,1061_B04,AIBS +ACACGGACAAGCGAGC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-95,Macaque-95,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,23625,6327,0.127272727272727,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACACGGACAAGCGAGC,1061_B04,AIBS +ACAGCGCTCCTCCCTC-1061_B04,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-288,Macaque-288,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7026,3393,0.0,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGCGCTCCTCCCTC,1061_B04,AIBS +ACATCAATCGTTAAGC-1061_B04,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-86,Macaque-86,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7958,3434,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACATCAATCGTTAAGC,1061_B04,AIBS +ACATTGCAGTTACTTC-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-154,Macaque-154,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5327,2604,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACATTGCAGTTACTTC,1061_B04,AIBS +ACCAAACTCGCTAAAC-1061_B04,Nonneuron,Vascular,Endo,Endo,Macaque-336,Macaque-336,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2514,1543,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACCAAACTCGCTAAAC,1061_B04,AIBS +ACCAAGTTCTCGACCT-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-238,Macaque-238,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,16226,4480,0.0727272727272727,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAAGTTCTCGACCT,1061_B04,AIBS +ACCAATATCTAATCCT-1061_B04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Macaque-216,Macaque-216,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,16384,5034,0.254545454545455,Macaca Mulatta,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAATATCTAATCCT,1061_B04,AIBS +ACCACATAGCATGAAG-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Macaque-178,Macaque-178,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,22650,6134,0.145454545454545,Macaca Mulatta,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCACATAGCATGAAG,1061_B04,AIBS +ACCCAACCAAACTGCC-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-240,Macaque-240,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10464,3722,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAACCAAACTGCC,1061_B04,AIBS +ACCCAGGGTTTCCTCC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Macaque-180,Macaque-180,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,27832,6990,0.2,Macaca Mulatta,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAGGGTTTCCTCC,1061_B04,AIBS +ACCCTGTTCCTAAGGT-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-25,Macaque-25,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9393,4016,0.178571428571429,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCTGTTCCTAAGGT,1061_B04,AIBS +ACGAATCTCCTTAGTT-1061_B04,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Macaque-165,Macaque-165,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14664,4621,0.218181818181818,Macaca Mulatta,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGAATCTCCTTAGTT,1061_B04,AIBS +ACGCCTAAGCACAGGG-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-262,Macaque-262,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10169,3813,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGCCTAAGCACAGGG,1061_B04,AIBS +ACGCCTTTCCTTGCAC-1061_B04,Nonneuron,Vascular,VLMC,VLMC,Macaque-346,Macaque-346,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7260,3072,0.0,Macaca Mulatta,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACGCCTTTCCTTGCAC,1061_B04,AIBS +ACGTACCCATCATGGC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-181,Macaque-181,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,18581,5671,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGTACCCATCATGGC,1061_B04,AIBS +ACGTCAAGTTAATGAC-1061_B04,Nonneuron,Vascular,VLMC,VLMC,Macaque-348,Macaque-348,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2406,1593,0.0,Macaca Mulatta,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACGTCAAGTTAATGAC,1061_B04,AIBS +ACGTTACAGTCACCTC-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-155,Macaque-155,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14047,4801,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGTTACAGTCACCTC,1061_B04,AIBS +ACTCGCGCATGGTTAT-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-90,Macaque-90,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,17806,5452,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTCGCGCATGGTTAT,1061_B04,AIBS +ACTTACAAGTCATGCG-1061_B04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Macaque-217,Macaque-217,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10810,3995,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTACAAGTCATGCG,1061_B04,AIBS +ACTTACAAGTTATTCC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-179,Macaque-179,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8994,3773,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTACAAGTTATTCC,1061_B04,AIBS +ACTTACTTCCCATAGG-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-182,Macaque-182,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4630,2610,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTACTTCCCATAGG,1061_B04,AIBS +ACTTAGGGTCCTTTAA-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-243,Macaque-243,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9005,3817,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTAGGGTCCTTTAA,1061_B04,AIBS +AGAACCGCATAGACTT-1061_B04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Macaque-218,Macaque-218,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8964,3311,0.0,Macaca Mulatta,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGAACCGCATAGACTT,1061_B04,AIBS +AGACAATAGTCATTAG-1061_B04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Macaque-219,Macaque-219,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8564,3782,0.0,Macaca Mulatta,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGACAATAGTCATTAG,1061_B04,AIBS +AGCAGGTAGTGAACAG-1061_B04,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-52,Macaque-52,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7876,3544,0.0,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCAGGTAGTGAACAG,1061_B04,AIBS +AGCGCCTAGTTAGTTG-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-24,Macaque-24,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14077,4780,0.178571428571429,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCGCCTAGTTAGTTG,1061_B04,AIBS +AGCTACTAGCTATTGA-1061_B04,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Macaque-362,Macaque-362,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8830,3494,0.0,Macaca Mulatta,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTACTAGCTATTGA,1061_B04,AIBS +AGCTAGTTCTAGCGAT-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-14,Macaque-14,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12346,4188,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTAGTTCTAGCGAT,1061_B04,AIBS +AGCTTGGTCCCTGGAA-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-368,Macaque-368,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,11570,4197,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTTGGTCCCTGGAA,1061_B04,AIBS +AGGAACCAGCGAGTAA-1061_B04,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-232,Macaque-232,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2066,1384,0.0,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGAACCAGCGAGTAA,1061_B04,AIBS +AGGAGCTAGTAAGTCC-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Macaque-252,Macaque-252,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,15886,4954,0.142857142857143,Macaca Mulatta,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGAGCTAGTAAGTCC,1061_B04,AIBS +AGGATATAGTCATTGA-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-26,Macaque-26,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12298,4607,0.0,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGATATAGTCATTGA,1061_B04,AIBS +AGGATGCAGTTATTCC-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Macaque-253,Macaque-253,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8030,3609,0.0,Macaca Mulatta,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGATGCAGTTATTCC,1061_B04,AIBS +AGTCAGGCATTGCGAC-1061_B04,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-233,Macaque-233,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6170,3069,0.25,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGTCAGGCATTGCGAC,1061_B04,AIBS +AGTTACATCCGCATGA-1061_B04,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-289,Macaque-289,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,27736,6666,0.236363636363636,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTTACATCCGCATGA,1061_B04,AIBS +ATAAGCCTCCATCAGG-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-157,Macaque-157,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,23708,6122,0.145454545454545,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATAAGCCTCCATCAGG,1061_B04,AIBS +ATATGCATCTTTAAGG-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST D1 GABA,Macaque-8,Macaque-8,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,16895,4836,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0065,Interneuron,,AMY|SLEA|BNST|D1|GABA,47,,,,,#9e86de,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATGCATCTTTAAGG,1061_B04,AIBS +ATCGCCCGTGAGCACT-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-156,Macaque-156,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,11922,4132,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCGCCCGTGAGCACT,1061_B04,AIBS +ATGACAACAGTAGCCT-1061_B04,Nonneuron,Immune,Microglia,Microglia,Macaque-378,Macaque-378,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2079,1343,0.0,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGACAACAGTAGCCT,1061_B04,AIBS +ATGCAGGCACGTTACA-1061_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-27,Macaque-27,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,3739,2109,0.0,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGCAGGCACGTTACA,1061_B04,AIBS +ATGGTGCGTTGGCCGA-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Macaque-383,Macaque-383,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4969,2709,0.142857142857143,Macaca Mulatta,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGGTGCGTTGGCCGA,1061_B04,AIBS +ATGTAAGCACAGGATG-1061_B04,Nonneuron,OPC-Oligo,OPC,OPC,Macaque-391,Macaque-391,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2716,1549,0.0,Macaca Mulatta,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGTAAGCACAGGATG,1061_B04,AIBS +ATTAGTCCACGAATTT-1061_B04,Nonneuron,Immune,Monocyte,Monocyte,Macaque-393,Macaque-393,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2171,1400,0.0,Macaca Mulatta,CS20250428_GROUP_0022,Nonneuron,,Monocyte,8,Yao et al. 2023,,,,#48e6b4,,CS20250428_SUBCL_0038,CL:0000542,Monocyte,6,#91132c,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTAGTCCACGAATTT,1061_B04,AIBS +ATTGCGCCAACAGGTG-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-369,Macaque-369,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,18109,4337,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTGCGCCAACAGGTG,1061_B04,AIBS +CAACTAATCTATGACA-1061_B04,Nonneuron,Vascular,VLMC,VLMC,Macaque-347,Macaque-347,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6109,3140,0.107142857142857,Macaca Mulatta,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAACTAATCTATGACA,1061_B04,AIBS +CAAGAACCAAACCTTG-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Macaque-279,Macaque-279,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2318,1335,0.0,Macaca Mulatta,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAAGAACCAAACCTTG,1061_B04,AIBS +CACATACAGGCATTAC-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-261,Macaque-261,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12337,4413,0.0714285714285714,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACATACAGGCATTAC,1061_B04,AIBS +CACCTGTTCCGGGACT-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-12,Macaque-12,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,12357,4323,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACCTGTTCCGGGACT,1061_B04,AIBS +CAGCCTTTCATTGTCT-1061_B04,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-234,Macaque-234,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2818,1675,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGCCTTTCATTGTCT,1061_B04,AIBS +CAGGAAGGTCACCTAT-1061_B04,Nonneuron,Vascular,Endo,Endo,Macaque-337,Macaque-337,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2514,1429,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGGAAGGTCACCTAT,1061_B04,AIBS +CATAACGGTTTGCTGT-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Macaque-123,Macaque-123,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4185,2362,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATAACGGTTTGCTGT,1061_B04,AIBS +CATGCGGGTTGTTCAC-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Macaque-397,Macaque-397,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,3937,2156,0.0,Macaca Mulatta,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATGCGGGTTGTTCAC,1061_B04,AIBS +CCACTTGGTTAGAGGG-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-244,Macaque-244,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9963,3883,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCACTTGGTTAGAGGG,1061_B04,AIBS +CCATCACTCTCACAAA-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-159,Macaque-159,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5617,2678,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCATCACTCTCACAAA,1061_B04,AIBS +CCCTGGACAACTCGCG-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-403,Macaque-403,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9825,3907,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTGGACAACTCGCG,1061_B04,AIBS +CCTAATCGTAATCCCT-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-246,Macaque-246,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,13444,3425,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTAATCGTAATCCCT,1061_B04,AIBS +CGAAGGCCATCTTGAG-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-101,Macaque-101,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9580,4057,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAAGGCCATCTTGAG,1061_B04,AIBS +CGCATTACAGCACGAA-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-173,Macaque-173,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,33100,6982,0.178571428571429,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCATTACAGCACGAA,1061_B04,AIBS +CGCGATTCACAATTAC-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Macaque-126,Macaque-126,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,8480,3451,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCGATTCACAATTAC,1061_B04,AIBS +CGCTTGCGTGGTTCTT-1061_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-112,Macaque-112,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,25929,6999,0.321428571428571,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCTTGCGTGGTTCTT,1061_B04,AIBS +CTAAGTCAGTTCCTGC-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-330,Macaque-330,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14449,4793,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAAGTCAGTTCCTGC,1061_B04,AIBS +CTAATAGTCGGTCAGC-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-162,Macaque-162,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4816,2386,0.0,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAATAGTCGGTCAGC,1061_B04,AIBS +CTCAATAAGTCATTAG-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-247,Macaque-247,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,10518,3752,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCAATAAGTCATTAG,1061_B04,AIBS +CTTTGGGAGGTGAAGC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-183,Macaque-183,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14334,5097,0.0727272727272727,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTTGGGAGGTGAAGC,1061_B04,AIBS +GAACACAAGTTAGTGC-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-15,Macaque-15,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,13316,4344,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAACACAAGTTAGTGC,1061_B04,AIBS +GAACCAGCACCAAAGG-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Macaque-424,Macaque-424,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,19340,5076,0.0909090909090909,Macaca Mulatta,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAACCAGCACCAAAGG,1061_B04,AIBS +GAGCAAGGTTGACTTC-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Macaque-122,Macaque-122,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5324,2745,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGCAAGGTTGACTTC,1061_B04,AIBS +GATAATCGTCCTTTAA-1061_B04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-40,Macaque-40,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,18451,4817,0.142857142857143,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATAATCGTCCTTTAA,1061_B04,AIBS +GATCCGTCATGTCAGC-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Macaque-198,Macaque-198,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,3834,1918,0.0909090909090909,Macaca Mulatta,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATCCGTCATGTCAGC,1061_B04,AIBS +GATTAGTGTCACCTAT-1061_B04,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Macaque-384,Macaque-384,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2999,1806,0.107142857142857,Macaca Mulatta,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATTAGTGTCACCTAT,1061_B04,AIBS +GATTGTTCACGAATCC-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-372,Macaque-372,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4300,2238,0.0,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATTGTTCACGAATCC,1061_B04,AIBS +GCAAGTGCAAACCCTA-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Macaque-125,Macaque-125,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,3670,2253,0.0,Macaca Mulatta,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAAGTGCAAACCCTA,1061_B04,AIBS +GCATCCTTCGAAGCGG-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-406,Macaque-406,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,11483,4159,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCATCCTTCGAAGCGG,1061_B04,AIBS +GCCTGCTGTTGTTCAC-1061_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-91,Macaque-91,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,18266,5673,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCTGCTGTTGTTCAC,1061_B04,AIBS +GCTCACAAGGTATTGC-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-16,Macaque-16,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,31444,5530,0.178571428571429,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTCACAAGGTATTGC,1061_B04,AIBS +GCTTACCTCCCTGACT-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-163,Macaque-163,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9103,3650,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTTACCTCCCTGACT,1061_B04,AIBS +GCTTCGCGTAATAGCT-1061_B04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-160,Macaque-160,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5653,2882,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTTCGCGTAATAGCT,1061_B04,AIBS +GTAGTTTCACTAAATC-1061_B04,Nonneuron,Immune,Macrophage,BAM,Macaque-440,Macaque-440,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,2089,1285,0.0,Macaca Mulatta,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTAGTTTCACTAAATC,1061_B04,AIBS +GTCCTCCCAACGTGCT-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-408,Macaque-408,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,11701,4104,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCCTCCCAACGTGCT,1061_B04,AIBS +GTTACGTAGTGCACGC-1061_B04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Macaque-124,Macaque-124,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,6808,3301,0.0,Macaca Mulatta,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTACGTAGTGCACGC,1061_B04,AIBS +GTTACTAAGCCTGTTC-1061_B04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-54,Macaque-54,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9903,4273,0.0,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTTACTAAGCCTGTTC,1061_B04,AIBS +GTTCCTTCAATCCCTT-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-375,Macaque-375,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,4235,2178,0.0,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTCCTTCAATCCCTT,1061_B04,AIBS +TAAAGCCTCTCGCCCA-1061_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Macaque-270,Macaque-270,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,31475,6914,0.0727272727272727,Macaca Mulatta,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAAAGCCTCTCGCCCA,1061_B04,AIBS +TACAACATCTAAGTCA-1061_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Macaque-259,Macaque-259,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,26431,5379,0.2,Macaca Mulatta,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACAACATCTAAGTCA,1061_B04,AIBS +TAGCCTCTCCCTGATC-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Macaque-410,Macaque-410,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,14890,4718,0.0545454545454545,Macaca Mulatta,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCCTCTCCCTGATC,1061_B04,AIBS +TCGTTAGCAGCACGTT-1061_B04,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-84,Macaque-84,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,3535,2205,0.0,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TCGTTAGCAGCACGTT,1061_B04,AIBS +TCTTAGTTCAGCCAAT-1061_B04,Nonneuron,OPC-Oligo,COP,COP,Macaque-389,Macaque-389,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,5698,2295,0.0357142857142857,Macaca Mulatta,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCTTAGTTCAGCCAAT,1061_B04,AIBS +TGTTACTTCCTAAGAC-1061_B04,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Macaque-166,Macaque-166,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,7793,3365,0.0363636363636364,Macaca Mulatta,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTTACTTCCTAAGAC,1061_B04,AIBS +TTCACTGTCATGAAGG-1061_B04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-249,Macaque-249,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,9889,4071,0.0181818181818182,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTCACTGTCATGAAGG,1061_B04,AIBS +TTTAAGCCATAGTCAT-1061_B04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Macaque-444,Macaque-444,CL:0000003,1061_B04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.028,0.7524,0.213,0.2391,0.2184,95529.2519,35407.0,0,95381,0.3599,0.9235,0.9632,0.9532,0.9523,525315356,4.6613,0.0107,0.9846,0.9301,42172.1289,10016.0,3875.0,0.3316,0.9387,0.9398,0.9272,0.9373,0.9069,0.341,0.1172,0.9076,0.1177,0.6727,0.4463,0.9485,0.1083,231904537,29345,0.9994,0.892,24651,5410,0.145454545454545,Macaca Mulatta,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTAAGCCATAGTCAT,1061_B04,AIBS +AAAGCCGCAACTAGAA-1061_A04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-114,Macaque-114,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,36144,7559,0.0533333333333333,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCGCAACTAGAA,1061_A04,AIBS +AACAGATAGAGGAGGA-1061_A04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-177,Macaque-177,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,17735,5391,0.0266666666666667,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGATAGAGGAGGA,1061_A04,AIBS +AAGTCTATCTCCTCTT-1061_A04,Nonneuron,Vascular,Endo,Endo,Macaque-339,Macaque-339,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,3597,1796,0.0,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAGTCTATCTCCTCTT,1061_A04,AIBS +ACAGGAATCACACAGT-1061_A04,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-447,Macaque-447,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,4276,2531,0.0266666666666667,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,ACAGGAATCACACAGT,1061_A04,AIBS +ACTAACGGTTAAATGC-1061_A04,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-263,Macaque-263,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,12331,4181,0.0,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTAACGGTTAAATGC,1061_A04,AIBS +ACTCGCTTCTACCTGC-1061_A04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-158,Macaque-158,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,12457,4583,0.0533333333333333,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTCGCTTCTACCTGC,1061_A04,AIBS +AGCTATATCCTGAATA-1061_A04,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Macaque-119,Macaque-119,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,11876,3987,0.0263157894736842,Macaca Mulatta,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTATATCCTGAATA,1061_A04,AIBS +AGTATAGCACACTAAT-1061_A04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Macaque-399,Macaque-399,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,24116,5225,0.0526315789473684,Macaca Mulatta,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTATAGCACACTAAT,1061_A04,AIBS +ATATAGGCAGCCAGAA-1061_A04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-3,Macaque-3,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,24065,5711,0.12,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATAGGCAGCCAGAA,1061_A04,AIBS +ATCCTGACAGGTCCTG-1061_A04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-115,Macaque-115,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,41461,7896,0.106666666666667,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCCTGACAGGTCCTG,1061_A04,AIBS +ATTAACCCAAGCGATG-1061_A04,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Macaque-455,Macaque-455,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,3635,2033,0.0,Macaca Mulatta,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTAACCCAAGCGATG,1061_A04,AIBS +CAACTAATCCCTCAAC-1061_A04,Nonneuron,Vascular,Endo,Endo,Macaque-341,Macaque-341,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,2071,1354,0.0,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAACTAATCCCTCAAC,1061_A04,AIBS +CATGGATTCCTTAATC-1061_A04,Nonneuron,Vascular,VLMC,VLMC,Macaque-349,Macaque-349,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,2433,1567,0.0,Macaca Mulatta,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATGGATTCCTTAATC,1061_A04,AIBS +CCAAGTTAGGGACGCA-1061_A04,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Macaque-226,Macaque-226,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,6562,2850,0.0,Macaca Mulatta,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCAAGTTAGGGACGCA,1061_A04,AIBS +CCTGAGTCATAATCAC-1061_A04,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-245,Macaque-245,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,5680,3008,0.0263157894736842,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTGAGTCATAATCAC,1061_A04,AIBS +CGCACAATCTTGACCC-1061_A04,Nonneuron,Astro-Epen,Ependymal,Ependymal,Macaque-459,Macaque-459,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,7729,2831,0.0,Macaca Mulatta,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGCACAATCTTGACCC,1061_A04,AIBS +CGCTTAACAGTAAGTA-1061_A04,Nonneuron,Immune,Monocyte,Monocyte,Macaque-395,Macaque-395,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,2234,1450,0.0,Macaca Mulatta,CS20250428_GROUP_0022,Nonneuron,,Monocyte,8,Yao et al. 2023,,,,#48e6b4,,CS20250428_SUBCL_0038,CL:0000542,Monocyte,6,#91132c,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGCTTAACAGTAAGTA,1061_A04,AIBS +CGGCTCACAAGTGTCC-1061_A04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-138,Macaque-138,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,26748,6825,0.173333333333333,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CGGCTCACAAGTGTCC,1061_A04,AIBS +CTAGCGGGTGCAATGC-1061_A04,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-450,Macaque-450,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,3416,2061,0.157894736842105,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,CTAGCGGGTGCAATGC,1061_A04,AIBS +CTTCTAAGTTGCAATG-1061_A04,Nonneuron,Vascular,VLMC,VLMC,Macaque-350,Macaque-350,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,3675,2100,0.0263157894736842,Macaca Mulatta,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTCTAAGTTGCAATG,1061_A04,AIBS +CTTTGGTGTTAAGCGC-1061_A04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-331,Macaque-331,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,15296,4670,0.04,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTTGGTGTTAAGCGC,1061_A04,AIBS +GAGGTACAGCGCCTTT-1061_A04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-167,Macaque-167,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,5957,3022,0.0789473684210526,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGGTACAGCGCCTTT,1061_A04,AIBS +GCTGTAAGTAACTACG-1061_A04,Nonneuron,Immune,Lymphocyte,T cells,Macaque-396,Macaque-396,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,3752,1753,0.0,Macaca Mulatta,CS20250428_GROUP_0059,Nonneuron,CL:0000084,T cells,6,Yao et al. 2023,,,"CD247, ITK",#f3b79b,,CS20250428_SUBCL_0015,CL:0000542,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCTGTAAGTAACTACG,1061_A04,AIBS +GGAGGTTAGACTTATG-1061_A04,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-161,Macaque-161,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,12307,3948,0.0526315789473684,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGAGGTTAGACTTATG,1061_A04,AIBS +GGTACAAAGGTCAAAG-1061_A04,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-294,Macaque-294,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,14005,4976,0.0666666666666667,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTACAAAGGTCAAAG,1061_A04,AIBS +GTGTTACAGCTTGCTC-1061_A04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Macaque-271,Macaque-271,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,22733,5947,0.08,Macaca Mulatta,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTGTTACAGCTTGCTC,1061_A04,AIBS +TCACCTCAGACTCGCA-1061_A04,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Macaque-300,Macaque-300,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,25128,6488,0.131578947368421,Macaca Mulatta,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCACCTCAGACTCGCA,1061_A04,AIBS +TGCGATTAGGCTGTCA-1061_A04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-186,Macaque-186,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,4972,2478,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGCGATTAGGCTGTCA,1061_A04,AIBS +TGGATTGGTCCTAATC-1061_A04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-116,Macaque-116,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,35534,7611,0.04,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGATTGGTCCTAATC,1061_A04,AIBS +TGTTATGAGCTGGACC-1061_A04,Nonneuron,OPC-Oligo,COP,COP,Macaque-390,Macaque-390,CL:0000003,1061_A04,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8785,0.0288,0.7634,0.2133,0.2425,0.2214,78757.7259,31570.0,0,98193,0.3481,0.9221,0.9621,0.9501,0.9178,588792759,4.6261,0.0129,0.9857,0.9362,55240.7199,11348.0,4179.0,0.4366,0.9384,0.9401,0.9321,0.941,0.9455,0.3321,0.1181,0.9079,0.1194,0.6704,0.4537,0.9489,0.1325,412979622,29966,0.9994,0.9075,5426,2381,0.0263157894736842,Macaca Mulatta,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGTTATGAGCTGGACC,1061_A04,AIBS +AAAGCCGCAAACATAG-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Macaque-427,Macaque-427,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,12548,4119,0.06,Macaca Mulatta,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCGCAAACATAG,810_C02,AIBS +AAAGCCGCACCCACCT-810_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Macaque-400,Macaque-400,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,11716,3756,0.04,Macaca Mulatta,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCGCACCCACCT,810_C02,AIBS +AAAGCTTGTCAAGTGC-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Macaque-445,Macaque-445,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,8343,3318,0.01,Macaca Mulatta,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCTTGTCAAGTGC,810_C02,AIBS +AAATGCCTCAGGCTAT-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-334,Macaque-334,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,14367,4367,0.0,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATGCCTCAGGCTAT,810_C02,AIBS +AACAGCAAGTTAGACC-810_C02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Macaque-273,Macaque-273,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,20317,5553,0.04,Macaca Mulatta,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGCAAGTTAGACC,810_C02,AIBS +AAGACATAGCCTGTGA-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-333,Macaque-333,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,12769,4181,0.0,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGACATAGCCTGTGA,810_C02,AIBS +AAGCCTTAGGCTGGCT-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Macaque-425,Macaque-425,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,6617,2934,0.06,Macaca Mulatta,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTTAGGCTGGCT,810_C02,AIBS +AAGGTATAGGCTCATG-810_C02,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Macaque-284,Macaque-284,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,2006,1163,0.0,Macaca Mulatta,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAGGTATAGGCTCATG,810_C02,AIBS +AAGTAGCCAAATTGCT-810_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Macaque-254,Macaque-254,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,10057,3890,0.0,Macaca Mulatta,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTAGCCAAATTGCT,810_C02,AIBS +ACCTTGCTCTAAGGAG-810_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Macaque-401,Macaque-401,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,9051,3235,0.0,Macaca Mulatta,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTGCTCTAAGGAG,810_C02,AIBS +ACGCCTTTCGTTAACA-810_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Macaque-402,Macaque-402,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,14225,4304,0.09,Macaca Mulatta,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGCCTTTCGTTAACA,810_C02,AIBS +ACGGTACGTGGAAACG-810_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Macaque-255,Macaque-255,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,7900,3333,0.0,Macaca Mulatta,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGGTACGTGGAAACG,810_C02,AIBS +ACTGAAACAGAAATTG-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Macaque-465,Macaque-465,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,12881,4079,0.02,Macaca Mulatta,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTGAAACAGAAATTG,810_C02,AIBS +AGGTTGCGTCATGCCC-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-335,Macaque-335,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,10484,3997,0.0,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTTGCGTCATGCCC,810_C02,AIBS +ATATAGGCATCATGGC-810_C02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Macaque-275,Macaque-275,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,29732,6350,0.04,Macaca Mulatta,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATAGGCATCATGGC,810_C02,AIBS +ATGACAACACCTCAGG-810_C02,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Macaque-363,Macaque-363,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,5188,2422,0.0,Macaca Mulatta,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGACAACACCTCAGG,810_C02,AIBS +ATGCGATTCTCCTCTT-810_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Macaque-127,Macaque-127,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,9084,3639,0.0,Macaca Mulatta,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGCGATTCTCCTCTT,810_C02,AIBS +ATGTTGTCAGCATGGA-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Macaque-426,Macaque-426,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,10979,3905,0.0,Macaca Mulatta,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGTTGTCAGCATGGA,810_C02,AIBS +ATTACGTCACTCAACA-810_C02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-265,Macaque-265,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,11709,3859,0.0,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTACGTCACTCAACA,810_C02,AIBS +ATTGGCTAGTTTGTCT-810_C02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Macaque-276,Macaque-276,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,28071,6381,0.06,Macaca Mulatta,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTGGCTAGTTTGTCT,810_C02,AIBS +CAACCCGCAGAAACGT-810_C02,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Macaque-256,Macaque-256,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,10406,3928,0.0,Macaca Mulatta,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAACCCGCAGAAACGT,810_C02,AIBS +CAAGGCCTCTTGCAGG-810_C02,Nonneuron,Vascular,Endo,Endo,Macaque-340,Macaque-340,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,22972,5685,0.0,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAAGGCCTCTTGCAGG,810_C02,AIBS +CAAGTATGTGCTAGCG-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Macaque-446,Macaque-446,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,10981,3782,0.0,Macaca Mulatta,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAAGTATGTGCTAGCG,810_C02,AIBS +CACATGCCATTATGAC-810_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Macaque-466,Macaque-466,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,18774,4796,0.12,Macaca Mulatta,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACATGCCATTATGAC,810_C02,AIBS +CATAAGCTCCTAGTCC-810_C02,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Macaque-277,Macaque-277,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,39200,7561,0.24,Macaca Mulatta,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATAAGCTCCTAGTCC,810_C02,AIBS +CATTATCTCCTAGTTT-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Macaque-428,Macaque-428,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,13834,4111,0.0,Macaca Mulatta,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATTATCTCCTAGTTT,810_C02,AIBS +CCATCACTCATTGTCT-810_C02,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Macaque-467,Macaque-467,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,16591,4583,0.02,Macaca Mulatta,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCATCACTCATTGTCT,810_C02,AIBS +CCCTGTTAGGTTAGCT-810_C02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-266,Macaque-266,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,14209,4223,0.03,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTGTTAGGTTAGCT,810_C02,AIBS +CCCTTAATCCTTTACG-810_C02,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-268,Macaque-268,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,12258,4066,0.0,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTTAATCCTTTACG,810_C02,AIBS +GCTTAGTAGGACAACA-810_C02,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-332,Macaque-332,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,16999,4781,0.06,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTTAGTAGGACAACA,810_C02,AIBS +GTTACTCGTTTGCTGT-810_C02,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Macaque-364,Macaque-364,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,4698,2131,0.0,Macaca Mulatta,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTACTCGTTTGCTGT,810_C02,AIBS +TCAACAATCACTTCAT-810_C02,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-448,Macaque-448,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,4385,2241,0.0,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,TCAACAATCACTTCAT,810_C02,AIBS +TTTCAGTTCATGCTTT-810_C02,Nonneuron,OPC-Oligo,OPC,OPC,Macaque-392,Macaque-392,CL:0000003,810_C02,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8854,0.0374,0.8166,0.2204,0.329,0.3052,80320.8551,34932.0,0,126729,0.3784,0.917,0.9646,0.9525,0.9366,1281197959,5.6984,0.008,0.9802,0.9521,43247.0895,11890.0,3981.0,0.3929,0.9607,0.9622,0.9372,0.9692,0.9217,0.2664,0.097,0.9278,0.1481,0.6827,0.5112,0.9579,0.1734,689834325,30463,0.9993,0.9416,5100,2088,0.0,Macaca Mulatta,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTTCAGTTCATGCTTT,810_C02,AIBS +AAACCGAAGCAAGGAC-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-373,Macaque-373,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,4910,2055,0.04,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCGAAGCAAGGAC,911_C03,AIBS +AAAGCTTGTCCTGATT-911_C03,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-264,Macaque-264,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,9028,2810,0.06,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCTTGTCCTGATT,911_C03,AIBS +AAAGGAGCACATAACT-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-409,Macaque-409,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,12560,3539,0.21,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGAGCACATAACT,911_C03,AIBS +AAAGGCTCAAGCTACC-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-103,Macaque-103,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,11366,3425,0.1,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGCTCAAGCTACC,911_C03,AIBS +AAATGCCTCGATAACC-911_C03,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Macaque-272,Macaque-272,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,17020,4386,0.12,Macaca Mulatta,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATGCCTCGATAACC,911_C03,AIBS +AACAAAGGTCACAGAC-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-405,Macaque-405,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,7830,2836,0.02,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAAAGGTCACAGAC,911_C03,AIBS +AACAAAGGTTATCCTA-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-96,Macaque-96,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,19190,4602,0.18,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAAAGGTTATCCTA,911_C03,AIBS +AACAGCAAGTCACCAG-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-404,Macaque-404,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,7051,2691,0.08,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGCAAGTCACCAG,911_C03,AIBS +AACAGGATCATGAAGG-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Macaque-398,Macaque-398,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,13413,3850,0.12,Macaca Mulatta,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGGATCATGAAGG,911_C03,AIBS +AACATAGCATGGTTAT-911_C03,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Macaque-168,Macaque-168,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,11204,3282,0.02,Macaca Mulatta,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACATAGCATGGTTAT,911_C03,AIBS +AACCTTAAGCGCATTG-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-370,Macaque-370,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,8454,2818,0.06,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCTTAAGCGCATTG,911_C03,AIBS +AACTAGTGTGGAGCAA-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-192,Macaque-192,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,8894,3263,0.1,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACTAGTGTGGAGCAA,911_C03,AIBS +AAGCCTTAGCTAATTG-911_C03,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-117,Macaque-117,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,29801,5678,0.14,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCCTTAGCTAATTG,911_C03,AIBS +AAGGATGTCATGGCCA-911_C03,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-305,Macaque-305,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,10043,3631,0.16,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGGATGTCATGGCCA,911_C03,AIBS +AAGTGAAGTGACCTGG-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-411,Macaque-411,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,4897,2121,0.06,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTGAAGTGACCTGG,911_C03,AIBS +AATACCGGTTATCGAG-911_C03,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Macaque-385,Macaque-385,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,2571,1431,0.36,Macaca Mulatta,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATACCGGTTATCGAG,911_C03,AIBS +AATTTGCCAACAGCCT-911_C03,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-292,Macaque-292,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,14671,3900,0.1,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTTGCCAACAGCCT,911_C03,AIBS +ACACTTAAGGTAAGCA-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-374,Macaque-374,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,18356,4320,0.32,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACACTTAAGGTAAGCA,911_C03,AIBS +ACCCAACCAAGTGTTT-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-414,Macaque-414,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,8645,2870,0.14,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAACCAAGTGTTT,911_C03,AIBS +ACCTAAGGTGAGCAAG-911_C03,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Macaque-37,Macaque-37,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,5437,2154,0.02,Macaca Mulatta,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTAAGGTGAGCAAG,911_C03,AIBS +ACTTGTAAGCGCTAAT-911_C03,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Macaque-197,Macaque-197,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,4283,1819,0.09,Macaca Mulatta,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACTTGTAAGCGCTAAT,911_C03,AIBS +ACTTGTCGTAGTCAAT-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-413,Macaque-413,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,9086,3048,0.09,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTGTCGTAGTCAAT,911_C03,AIBS +AGCACTAGTTGAGGTC-911_C03,Nonneuron,Immune,Lymphocyte,T cells,Macaque-394,Macaque-394,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,2878,1606,0.1,Macaca Mulatta,CS20250428_GROUP_0059,Nonneuron,CL:0000084,T cells,6,Yao et al. 2023,,,"CD247, ITK",#f3b79b,,CS20250428_SUBCL_0015,CL:0000542,Lymphocyte,5,#aa66d4,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGCACTAGTTGAGGTC,911_C03,AIBS +AGCCTAAGTTTATCGC-911_C03,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-453,Macaque-453,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,3893,1914,0.04,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AGCCTAAGTTTATCGC,911_C03,AIBS +AGCTACTAGAATGACG-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-371,Macaque-371,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,16121,4278,0.15,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTACTAGAATGACG,911_C03,AIBS +AGGATATAGCCAAATC-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-17,Macaque-17,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,11119,3187,0.14,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGATATAGCCAAATC,911_C03,AIBS +ATTCCTAGTATTTGGG-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Macaque-329,Macaque-329,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,14456,3856,0.28,Macaca Mulatta,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCCTAGTATTTGGG,911_C03,AIBS +ATTCCTCCATAGGCGA-911_C03,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Macaque-267,Macaque-267,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,6634,2570,0.06,Macaca Mulatta,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCCTCCATAGGCGA,911_C03,AIBS +CCAGCTAAGCGCCTAA-911_C03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-412,Macaque-412,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,4618,2022,0.0,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCAGCTAAGCGCCTAA,911_C03,AIBS +CGCTTACTCTGTGCCT-911_C03,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-376,Macaque-376,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,6906,2559,0.0,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCTTACTCTGTGCCT,911_C03,AIBS +CGTATTGCAATAATGG-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Macaque-187,Macaque-187,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,19438,4557,0.14,Macaca Mulatta,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTATTGCAATAATGG,911_C03,AIBS +CTCCAACTCTTCAATC-911_C03,Nonneuron,Immune,Microglia,Microglia,Macaque-381,Macaque-381,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,3031,1494,0.06,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTCCAACTCTTCAATC,911_C03,AIBS +CTTGAACAGTTCCCAC-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-193,Macaque-193,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,13971,3913,0.12,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTGAACAGTTCCCAC,911_C03,AIBS +GAACCAAAGCGCCTTT-911_C03,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-242,Macaque-242,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,4943,2235,0.0,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAACCAAAGCGCCTTT,911_C03,AIBS +GTCGCAATCAGCTAAC-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Macaque-189,Macaque-189,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,5021,2344,0.04,Macaca Mulatta,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCGCAATCAGCTAAC,911_C03,AIBS +GTTTCCTCACAATACT-911_C03,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Macaque-201,Macaque-201,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,8104,3595,0.02,Macaca Mulatta,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTTCCTCACAATACT,911_C03,AIBS +TAGGAACCAGTTATCG-911_C03,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-290,Macaque-290,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,10258,3720,0.04,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGAACCAGTTATCG,911_C03,AIBS +TGATCAATCATGCCTC-911_C03,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-451,Macaque-451,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,2646,1514,0.08,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,TGATCAATCATGCCTC,911_C03,AIBS +TGTAACTCATAGCTTG-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-105,Macaque-105,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,7808,2876,0.0,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTAACTCATAGCTTG,911_C03,AIBS +TTGGATCAGGTTAGAG-911_C03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-191,Macaque-191,CL:0000003,911_C03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuPV,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8951,0.0274,0.8476,0.211,0.2527,0.2358,39462.9989,13584.0,0,90414,0.4385,0.9018,0.9531,0.9368,0.9337,528014925,5.2145,0.0132,0.9794,0.9367,63537.6089,5832.5,2349.5,0.6877,0.9568,0.9611,0.9358,0.9096,0.9384,0.352,0.0821,0.9323,0.1075,0.7427,0.4705,0.9523,0.0235,850133207,29923,0.9987,0.8034,7079,2940,0.06,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGGATCAGGTTAGAG,911_C03,AIBS +AAACATGCAGTTTGGC-1199_A06,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Macaque-470,Macaque-470,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,19202,4843,0.0425531914893617,Macaca Mulatta,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAACATGCAGTTTGGC,1199_A06,AIBS +AAACCGCGTTTGCTGT-1199_A06,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Macaque-471,Macaque-471,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,6778,2785,0.0,Macaca Mulatta,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAACCGCGTTTGCTGT,1199_A06,AIBS +AAACGTACATTGCGAC-1199_A06,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Macaque-139,Macaque-139,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,8476,3157,0.0,Macaca Mulatta,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AAACGTACATTGCGAC,1199_A06,AIBS +AAAGGAGCAATAGTCT-1199_A06,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-235,Macaque-235,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,2323,1327,0.0,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGGAGCAATAGTCT,1199_A06,AIBS +AACATTGTCGGGATTT-1199_A06,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-475,Macaque-475,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,17283,4633,0.234042553191489,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AACATTGTCGGGATTT,1199_A06,AIBS +AACCGCTCAGTAATAG-1199_A06,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-303,Macaque-303,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,11824,3890,0.0,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCGCTCAGTAATAG,1199_A06,AIBS +AACCGCTCATGTTGGC-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-306,Macaque-306,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,9374,3624,0.0212765957446809,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCGCTCATGTTGGC,1199_A06,AIBS +AACCGGCTCCCTCAGT-1199_A06,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-477,Macaque-477,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,9920,3497,0.191489361702128,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AACCGGCTCCCTCAGT,1199_A06,AIBS +AACCGGCTCCTCACAC-1199_A06,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-322,Macaque-322,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,6813,2966,0.0,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCGGCTCCTCACAC,1199_A06,AIBS +AATGTCCAGTGTTGTA-1199_A06,Nonneuron,Immune,Microglia,Microglia,Macaque-379,Macaque-379,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,2010,1161,0.0,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATGTCCAGTGTTGTA,1199_A06,AIBS +ACGAATCTCTCACTCA-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-310,Macaque-310,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,13440,4273,0.125,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGAATCTCTCACTCA,1199_A06,AIBS +AGAAACCCATTGCAGC-1199_A06,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-476,Macaque-476,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,13639,4410,0.333333333333333,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AGAAACCCATTGCAGC,1199_A06,AIBS +AGCCTGGGTGCTCCAC-1199_A06,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Macaque-141,Macaque-141,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,5635,2759,0.0212765957446809,Macaca Mulatta,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AGCCTGGGTGCTCCAC,1199_A06,AIBS +ATCCCGCGTGGGAACA-1199_A06,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-143,Macaque-143,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,4268,2209,0.0,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATCCCGCGTGGGAACA,1199_A06,AIBS +ATCGCCCGTACTTCAC-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-313,Macaque-313,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,8909,3429,0.0212765957446809,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCGCCCGTACTTCAC,1199_A06,AIBS +CACTTTGTCTGTTGCC-1199_A06,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-148,Macaque-148,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,10138,3577,0.0,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CACTTTGTCTGTTGCC,1199_A06,AIBS +CTCCTCACATGGCCTG-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-312,Macaque-312,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,5051,2454,0.0,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCCTCACATGGCCTG,1199_A06,AIBS +GGTGCTGGTTTCGCGC-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-297,Macaque-297,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,3858,2144,0.0,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTGCTGGTTTCGCGC,1199_A06,AIBS +GGTTCCCGTCTCACTG-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-295,Macaque-295,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,8347,3305,0.0,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTCCCGTCTCACTG,1199_A06,AIBS +GTAAGCTTCAAACACC-1199_A06,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-142,Macaque-142,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,6204,2589,0.0,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTAAGCTTCAAACACC,1199_A06,AIBS +GTTTCTAGTCATGCCC-1199_A06,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Macaque-480,Macaque-480,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,8046,3080,0.0416666666666667,Macaca Mulatta,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTTTCTAGTCATGCCC,1199_A06,AIBS +TCCCTGGTCGATTCTT-1199_A06,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-146,Macaque-146,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,16211,5000,0.125,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TCCCTGGTCGATTCTT,1199_A06,AIBS +TGACTCCTCTTGATGA-1199_A06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-315,Macaque-315,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,18474,5045,0.125,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGACTCCTCTTGATGA,1199_A06,AIBS +TGATCGAGTCCGGTTC-1199_A06,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PVALB GABA,Macaque-493,Macaque-493,CL:0000003,1199_A06,QM21.26.001,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0318,0.9065,0.2198,0.265,0.2401,89832.0581,12687.5,0,107576,0.6435,0.9277,0.9684,0.9591,0.9481,422390337,5.3126,0.02,0.9856,0.9454,64564.6925,2500.5,1322.5,0.7389,0.9489,0.9534,0.9186,0.9198,0.8988,0.3656,0.0858,0.9221,0.1103,0.726,0.4438,0.9435,0.0001,303583184,27861,0.9987,0.8148,7591,3026,0.0,Macaca Mulatta,CS20250428_GROUP_0033,Interneuron,PR 2577,SN|GATA3|PVALB|GABA,41,Partanen et al. 2022,aSNpr,,Six3 and Foxp1,#017d7c,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGATCGAGTCCGGTTC,1199_A06,AIBS +ACAGGAATCCGTTAAA-795.1_B06,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB Dopa-GABA,Macaque-365,Macaque-365,CL:0000003,795.1_B06,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8872,0.0255,0.777,0.19,0.2158,0.1969,734220.8371,34887.5,0,84864,0.8586,0.8754,0.9459,0.9253,0.9123,842885521,4.5618,0.0125,0.9741,0.9021,987956.716,31419.0,6577.5,0.9154,0.957,0.9598,0.9326,0.9581,0.9411,0.3217,0.0951,0.8973,0.1163,0.6859,0.4569,0.934,0.1194,1134174310,28794,0.9993,0.9408,25070,6463,0.0,Macaca Mulatta,CS20250428_GROUP_0067,Interneuron,,OB|Dopa|GABA,61,,,,,#902f6b,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGGAATCCGTTAAA,795.1_B06,AIBS +CCCTTAATCGTTTCGC-795.1_B06,Nonneuron,Immune,Microglia,Microglia,Macaque-432,Macaque-432,CL:0000003,795.1_B06,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8872,0.0255,0.777,0.19,0.2158,0.1969,734220.8371,34887.5,0,84864,0.8586,0.8754,0.9459,0.9253,0.9123,842885521,4.5618,0.0125,0.9741,0.9021,987956.716,31419.0,6577.5,0.9154,0.957,0.9598,0.9326,0.9581,0.9411,0.3217,0.0951,0.8973,0.1163,0.6859,0.4569,0.934,0.1194,1134174310,28794,0.9993,0.9408,4734,2393,0.0,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCCTTAATCGTTTCGC,795.1_B06,AIBS +CTACAACAGTTGTCAA-795.1_B06,Nonneuron,Astro-Epen,Ependymal,Ependymal,Macaque-460,Macaque-460,CL:0000003,795.1_B06,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8872,0.0255,0.777,0.19,0.2158,0.1969,734220.8371,34887.5,0,84864,0.8586,0.8754,0.9459,0.9253,0.9123,842885521,4.5618,0.0125,0.9741,0.9021,987956.716,31419.0,6577.5,0.9154,0.957,0.9598,0.9326,0.9581,0.9411,0.3217,0.0951,0.8973,0.1163,0.6859,0.4569,0.934,0.1194,1134174310,28794,0.9993,0.9408,38853,8016,0.166666666666667,Macaca Mulatta,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTACAACAGTTGTCAA,795.1_B06,AIBS +AAACGTACAGTAAAGC-897_D03,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Macaque-495,Macaque-495,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,28009,5957,0.0888888888888889,Macaca Mulatta,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACGTACAGTAAAGC,897_D03,AIBS +AACATTGTCTCCATGC-897_D03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-190,Macaque-190,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,26470,5539,0.144444444444444,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACATTGTCTCCATGC,897_D03,AIBS +AAGACCAAGTTAGAGG-897_D03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-185,Macaque-185,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,23771,5695,0.266666666666667,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGACCAAGTTAGAGG,897_D03,AIBS +AAGCGGGTCACCATTT-897_D03,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Macaque-488,Macaque-488,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,8760,3459,0.144444444444444,Macaca Mulatta,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,AAGCGGGTCACCATTT,897_D03,AIBS +AATTCGTCAATGAAGC-897_D03,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Macaque-291,Macaque-291,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,28186,5557,0.177777777777778,Macaca Mulatta,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTCGTCAATGAAGC,897_D03,AIBS +ACCTTGCTCCACCTGT-897_D03,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Macaque-194,Macaque-194,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,43794,7550,0.333333333333333,Macaca Mulatta,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTGCTCCACCTGT,897_D03,AIBS +ACGTCCAAGGCCAATT-897_D03,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-449,Macaque-449,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,2763,1555,0.133333333333333,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,ACGTCCAAGGCCAATT,897_D03,AIBS +AGAGAAGCATAGCTTG-897_D03,Nonneuron,Immune,Microglia,Microglia,Macaque-437,Macaque-437,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,3264,1594,0.177777777777778,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGAGAAGCATAGCTTG,897_D03,AIBS +ATTTAGCCACCTCACC-897_D03,Nonneuron,Vascular,Endo,Endo,Macaque-342,Macaque-342,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,3514,1728,0.111111111111111,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTTAGCCACCTCACC,897_D03,AIBS +CTGGCTAAGGTCCTGA-897_D03,Nonneuron,Vascular,Pericyte,Pericyte,Macaque-496,Macaque-496,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,2345,1369,0.0888888888888889,Macaca Mulatta,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTGGCTAAGGTCCTGA,897_D03,AIBS +CTGTTCATCACTAAGC-897_D03,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-452,Macaque-452,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,5364,2396,0.555555555555556,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,CTGTTCATCACTAAGC,897_D03,AIBS +GTGCTGGGTTTGGCGG-897_D03,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Macaque-386,Macaque-386,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,2116,1283,0.0,Macaca Mulatta,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTGCTGGGTTTGGCGG,897_D03,AIBS +GTTAATGTCCTAGTAA-897_D03,Nonneuron,Vascular,Pericyte,Pericyte,Macaque-498,Macaque-498,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,2190,1123,0.0222222222222222,Macaca Mulatta,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTAATGTCCTAGTAA,897_D03,AIBS +TACTGCACATCCATCT-897_D03,Nonneuron,Immune,Microglia,Microglia,Macaque-382,Macaque-382,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,3189,1360,0.0555555555555556,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACTGCACATCCATCT,897_D03,AIBS +TGACCTTGTCCTAATC-897_D03,Nonneuron,Immune,Microglia,Microglia,Macaque-434,Macaque-434,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,5081,2324,0.0666666666666667,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGACCTTGTCCTAATC,897_D03,AIBS +TTGTTGCGTGTTGCAA-897_D03,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Macaque-500,Macaque-500,CL:0000003,897_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8936,0.0412,0.8884,0.2588,0.3444,0.3109,102548.1168,14408.0,0,140792,0.664,0.9223,0.9595,0.9541,0.9472,926522235,5.8208,0.0189,0.9823,0.9287,124058.9151,2901.0,1399.0,0.8439,0.9734,0.9755,0.9546,0.9659,0.9594,0.3446,0.0945,0.9172,0.1156,0.7071,0.4546,0.9461,0.0233,1120872298,30143,0.9986,0.8237,17524,5057,0.0111111111111111,Macaca Mulatta,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGTTGCGTGTTGCAA,897_D03,AIBS +AAATGCCTCGTTACAA-936_D03,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Macaque-202,Macaque-202,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,10491,3368,0.24,Macaca Mulatta,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAATGCCTCGTTACAA,936_D03,AIBS +AAATGGCCAGCTCATA-936_D03,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Macaque-407,Macaque-407,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,21469,4723,0.0,Macaca Mulatta,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATGGCCAGCTCATA,936_D03,AIBS +AATCAGGAGCTTCTCA-936_D03,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Macaque-283,Macaque-283,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,19189,6060,0.0,Macaca Mulatta,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATCAGGAGCTTCTCA,936_D03,AIBS +AGCCAGTGTAGTTACG-936_D03,Nonneuron,Astro-Epen,Astrocyte,ImAstro,Macaque-454,Macaque-454,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,4938,2699,0.02,Macaca Mulatta,CS20250428_GROUP_0017,Nonneuron,,ImAstro,2,,,,,#f1c0a6,,CS20250428_SUBCL_0000,,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,,Nonneuron,1,#f2ca7d,,AGCCAGTGTAGTTACG,936_D03,AIBS +AGCTACTAGGTGCTGC-936_D03,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Macaque-236,Macaque-236,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,8115,2835,0.02,Macaca Mulatta,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGCTACTAGGTGCTGC,936_D03,AIBS +ATCCTTAGTTGCATCT-936_D03,Nonneuron,Vascular,Pericyte,Pericyte,Macaque-497,Macaque-497,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,2813,1612,0.0,Macaca Mulatta,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATCCTTAGTTGCATCT,936_D03,AIBS +ATCTATGAGGAGCAAC-936_D03,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-55,Macaque-55,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,22650,6502,0.12,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCTATGAGGAGCAAC,936_D03,AIBS +ATTTAGCCAGGCTTGT-936_D03,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB Dopa-GABA,Macaque-366,Macaque-366,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,6573,2942,0.0,Macaca Mulatta,CS20250428_GROUP_0067,Interneuron,,OB|Dopa|GABA,61,,,,,#902f6b,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTTAGCCAGGCTTGT,936_D03,AIBS +CAGGAAGGTTCAAGCA-936_D03,Nonneuron,Immune,Macrophage,BAM,Macaque-441,Macaque-441,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,5239,2473,0.04,Macaca Mulatta,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGGAAGGTTCAAGCA,936_D03,AIBS +GTACGTAGTATTTGCC-936_D03,Nonneuron,Immune,Microglia,Microglia,Macaque-435,Macaque-435,CL:0000003,936_D03,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8954,0.0363,0.8828,0.2198,0.3081,0.2803,81685.3549,24841.0,0,123039,0.4789,0.9108,0.9488,0.9583,0.9233,969360107,5.1628,0.011,0.9854,0.9445,85720.314,18121.0,5043.0,0.5824,0.967,0.9694,0.9561,0.9603,0.9642,0.247,0.1291,0.9246,0.139,0.6565,0.5362,0.9572,0.1325,1017242966,30477,0.9994,0.9411,2622,1651,0.16,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTACGTAGTATTTGCC,936_D03,AIBS +TCATTACTCACGAATC-897_A03,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Macaque-250,Macaque-250,CL:0000003,897_A03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaT,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8978,0.0346,0.8741,0.2116,0.2906,0.2634,76573.9707,23978.0,0,116867,0.4905,0.9126,0.9469,0.9552,0.9202,1023411119,4.9443,0.0162,0.9821,0.9359,94254.7766,8341.0,3020.0,0.7301,0.972,0.9739,0.9551,0.9613,0.9689,0.3487,0.0866,0.9324,0.1258,0.72,0.4559,0.9568,0.0224,1259715089,30671,0.9987,0.8083,13471,3848,0.1,Macaca Mulatta,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATTACTCACGAATC,897_A03,AIBS +TCTAGCCTCGCACAAT-897_A03,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Macaque-229,Macaque-229,CL:0000003,897_A03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaT,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8978,0.0346,0.8741,0.2116,0.2906,0.2634,76573.9707,23978.0,0,116867,0.4905,0.9126,0.9469,0.9552,0.9202,1023411119,4.9443,0.0162,0.9821,0.9359,94254.7766,8341.0,3020.0,0.7301,0.972,0.9739,0.9551,0.9613,0.9689,0.3487,0.0866,0.9324,0.1258,0.72,0.4559,0.9568,0.0224,1259715089,30671,0.9987,0.8083,8678,3454,0.0,Macaca Mulatta,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTAGCCTCGCACAAT,897_A03,AIBS +AAGTGAAGTGGATTAT-936_B03,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Macaque-274,Macaque-274,CL:0000003,936_B03,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuC,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8886,0.0357,0.8808,0.2468,0.3582,0.3273,53845.0566,24504.0,0,121260,0.4037,0.9147,0.9696,0.9566,0.9337,909119936,5.6124,0.012,0.9818,0.9671,58636.3288,14044.0,4168.0,0.4822,0.9661,0.9683,0.9584,0.9679,0.9518,0.2659,0.1019,0.9244,0.1434,0.6791,0.513,0.9579,0.1299,990015775,30328,0.9993,0.9395,22979,5689,0.04,Macaca Mulatta,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTGAAGTGGATTAT,936_B03,AIBS +ACGTTGTAGGTGTTAC-936_B03,Nonneuron,Vascular,SMC,SMC,Macaque-499,Macaque-499,CL:0000003,936_B03,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuC,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8886,0.0357,0.8808,0.2468,0.3582,0.3273,53845.0566,24504.0,0,121260,0.4037,0.9147,0.9696,0.9566,0.9337,909119936,5.6124,0.012,0.9818,0.9671,58636.3288,14044.0,4168.0,0.4822,0.9661,0.9683,0.9584,0.9679,0.9518,0.2659,0.1019,0.9244,0.1434,0.6791,0.513,0.9579,0.1299,990015775,30328,0.9993,0.9395,2724,1495,0.0,Macaca Mulatta,CS20250428_GROUP_0028,Nonneuron,CL:0000192,SMC,16,Yao et al. 2023,,,ACTA2,#177242,,CS20250428_SUBCL_0024,CL:0000192,SMC,12,#ab0c8d,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACGTTGTAGGTGTTAC,936_B03,AIBS +CAGATTCAGGAAACTG-936_B03,Nonneuron,Vascular,Endo,Endo,Macaque-343,Macaque-343,CL:0000003,936_B03,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuC,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8886,0.0357,0.8808,0.2468,0.3582,0.3273,53845.0566,24504.0,0,121260,0.4037,0.9147,0.9696,0.9566,0.9337,909119936,5.6124,0.012,0.9818,0.9671,58636.3288,14044.0,4168.0,0.4822,0.9661,0.9683,0.9584,0.9679,0.9518,0.2659,0.1019,0.9244,0.1434,0.6791,0.513,0.9579,0.1299,990015775,30328,0.9993,0.9395,21374,5763,0.0,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAGATTCAGGAAACTG,936_B03,AIBS +AAACATGCAAACGCGA-1106_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-106,Macaque-106,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,14117,3991,0.18,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACATGCAAACGCGA,1106_B04,AIBS +AAACATGCAATATACC-1106_B04,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Macaque-456,Macaque-456,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,5340,2057,0.08,Macaca Mulatta,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACATGCAATATACC,1106_B04,AIBS +AACAGATAGCGAGGTG-1106_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-28,Macaque-28,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,7994,3140,0.24,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGATAGCGAGGTG,1106_B04,AIBS +AACCGGCTCATTAGTG-1106_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-9,Macaque-9,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,7937,2886,0.21,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACCGGCTCATTAGTG,1106_B04,AIBS +AAGCAAGTCATGTTTC-1106_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Macaque-188,Macaque-188,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,5657,2657,0.0,Macaca Mulatta,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCAAGTCATGTTTC,1106_B04,AIBS +AAGTTTGTCATTACAG-1106_B04,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Macaque-457,Macaque-457,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,7331,2398,0.06,Macaca Mulatta,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTTTGTCATTACAG,1106_B04,AIBS +ACAGGATCAGTAGGAT-1106_B04,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Macaque-29,Macaque-29,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,13631,3778,0.21,Macaca Mulatta,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGGATCAGTAGGAT,1106_B04,AIBS +ACCCGCTGTCACACCC-1106_B04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-53,Macaque-53,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,5167,2505,0.1,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACCCGCTGTCACACCC,1106_B04,AIBS +ACCTTGCTCGGCCATA-1106_B04,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Macaque-102,Macaque-102,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,12052,3839,0.12,Macaca Mulatta,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTGCTCGGCCATA,1106_B04,AIBS +AGACACGCAGTTTCTC-1106_B04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-65,Macaque-65,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,7777,2837,0.14,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGACACGCAGTTTCTC,1106_B04,AIBS +CAGGCTGGTGTTCCCA-1106_B04,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Macaque-113,Macaque-113,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,5061,2520,0.04,Macaca Mulatta,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAGGCTGGTGTTCCCA,1106_B04,AIBS +CCTCAAACATTAAGCT-1106_B04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-10,Macaque-10,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,11449,3556,0.16,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTCAAACATTAAGCT,1106_B04,AIBS +CCTGCTCCAAACTGTT-1106_B04,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Macaque-458,Macaque-458,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,7143,2683,0.08,Macaca Mulatta,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTGCTCCAAACTGTT,1106_B04,AIBS +TGTGCACCATGTGGGA-1106_B04,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-66,Macaque-66,CL:0000003,1106_B04,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8907,0.0257,0.8582,0.2109,0.2248,0.2047,83170.4046,4080.0,0,86653,0.7832,0.9196,0.9594,0.9528,0.9034,1343368375,4.804,0.0304,0.9843,0.9289,61054.622,2445.5,1461.0,0.7757,0.9356,0.9419,0.9116,0.9252,0.9282,0.3594,0.0805,0.9085,0.1127,0.7153,0.434,0.9291,0.0001,986154255,30441,0.9984,0.8337,5268,2261,0.12,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TGTGCACCATGTGGGA,1106_B04,AIBS +CCTAATCGTGCTCACC-936_C03,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Macaque-278,Macaque-278,CL:0000003,936_C03,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8924,0.038,0.8951,0.2472,0.3596,0.3285,54325.338,22917.5,0,129779,0.4199,0.9205,0.9673,0.959,0.9377,1086506760,5.675,0.0103,0.9848,0.9601,54129.3235,13146.5,4045.0,0.4723,0.9673,0.9699,0.9596,0.9779,0.9773,0.2565,0.1042,0.926,0.1403,0.6816,0.527,0.9589,0.1385,1082586469,30609,0.9993,0.9413,11125,3915,0.0,Macaca Mulatta,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTAATCGTGCTCACC,936_C03,AIBS +TTTGAGTCATGAATAG-936_C03,Nonneuron,Vascular,Endo,Endo,Macaque-338,Macaque-338,CL:0000003,936_C03,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8924,0.038,0.8951,0.2472,0.3596,0.3285,54325.338,22917.5,0,129779,0.4199,0.9205,0.9673,0.959,0.9377,1086506760,5.675,0.0103,0.9848,0.9601,54129.3235,13146.5,4045.0,0.4723,0.9673,0.9699,0.9596,0.9779,0.9773,0.2565,0.1042,0.926,0.1403,0.6816,0.527,0.9589,0.1385,1082586469,30609,0.9993,0.9413,2348,1272,0.0,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTTGAGTCATGAATAG,936_C03,AIBS +AAACAGCCACTTCATC-954_C06,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Macaque-489,Macaque-489,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,59187,9369,0.0,Macaca Mulatta,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,AAACAGCCACTTCATC,954_C06,AIBS +AAACATGCACACTAAT-954_C06,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Macaque-501,Macaque-501,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,65055,9358,0.0,Macaca Mulatta,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACATGCACACTAAT,954_C06,AIBS +AAAGCTTGTACTAAAC-954_C06,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Macaque-502,Macaque-502,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,62602,9021,0.0149253731343284,Macaca Mulatta,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCTTGTACTAAAC,954_C06,AIBS +AAGCTCCCATTGCGTA-954_C06,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Macaque-491,Macaque-491,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,37900,7985,0.0149253731343284,Macaca Mulatta,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,AAGCTCCCATTGCGTA,954_C06,AIBS +ACCCAACCACCTACTT-954_C06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-309,Macaque-309,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,28853,6548,0.0,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAACCACCTACTT,954_C06,AIBS +AGATGAAGTTCGCTCA-954_C06,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Macaque-492,Macaque-492,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,12563,4963,0.0149253731343284,Macaca Mulatta,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,AGATGAAGTTCGCTCA,954_C06,AIBS +ATAAGCCTCTATGACA-954_C06,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-325,Macaque-325,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,31076,6781,0.0882352941176471,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATAAGCCTCTATGACA,954_C06,AIBS +ATCAAGACAATGAGGT-954_C06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-296,Macaque-296,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,46535,8589,0.223880597014925,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCAAGACAATGAGGT,954_C06,AIBS +CAGCAAGCAAAGCGCA-954_C06,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Macaque-490,Macaque-490,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,51748,9019,0.0,Macaca Mulatta,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,CAGCAAGCAAAGCGCA,954_C06,AIBS +CATAGTCAGTTATTCC-954_C06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-311,Macaque-311,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,46109,8279,0.0597014925373134,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATAGTCAGTTATTCC,954_C06,AIBS +CTTCTCAAGGAGCAAC-954_C06,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Macaque-387,Macaque-387,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,7554,3061,0.537313432835821,Macaca Mulatta,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTCTCAAGGAGCAAC,954_C06,AIBS +GATAAAGGTCCACAAA-954_C06,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-326,Macaque-326,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,24853,6450,0.0149253731343284,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATAAAGGTCCACAAA,954_C06,AIBS +TAGGAACCAATTGAAG-954_C06,Nonneuron,Immune,Microglia,Microglia,Macaque-380,Macaque-380,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,4236,1926,0.0,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAGGAACCAATTGAAG,954_C06,AIBS +TAGGAGTCAACCGCCA-954_C06,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-298,Macaque-298,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,35034,7605,0.0447761194029851,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGAGTCAACCGCCA,954_C06,AIBS +TAGTTGTCATTATCCC-954_C06,Nonneuron,Vascular,Endo,Endo,Macaque-344,Macaque-344,CL:0000003,954_C06,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8852,0.0368,0.8127,0.2404,0.31,0.28,147263.4198,26305.0,0,126209,0.5494,0.8909,0.9577,0.947,0.9019,993144503,5.2911,0.0205,0.9668,0.9493,130317.5245,5967.0,2550.5,0.7427,0.9562,0.9584,0.936,0.9393,0.93,0.2585,0.1217,0.9089,0.1343,0.6529,0.5132,0.9467,0.1865,878861385,30264,0.9995,0.9467,10891,3967,0.0588235294117647,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAGTTGTCATTATCCC,954_C06,AIBS +AAACCAACAGGCGAGT-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PVALB GABA,Macaque-494,Macaque-494,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,27446,7019,0.0833333333333333,Macaca Mulatta,CS20250428_GROUP_0033,Interneuron,PR 2577,SN|GATA3|PVALB|GABA,41,Partanen et al. 2022,aSNpr,,Six3 and Foxp1,#017d7c,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACCAACAGGCGAGT,1169_B01,AIBS +AAACCGAAGGCTAATC-1169_B01,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-484,Macaque-484,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,54226,8361,0.0138888888888889,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AAACCGAAGGCTAATC,1169_B01,AIBS +AAACCGCGTGCTCCGT-1169_B01,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-482,Macaque-482,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,40064,7889,0.0277777777777778,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AAACCGCGTGCTCCGT,1169_B01,AIBS +AAAGCCGCACACAATT-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Macaque-320,Macaque-320,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,41056,8253,0.180555555555556,Macaca Mulatta,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGCCGCACACAATT,1169_B01,AIBS +AAAGGTTAGCACTTGG-1169_B01,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-483,Macaque-483,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,30019,6808,0.111111111111111,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AAAGGTTAGCACTTGG,1169_B01,AIBS +AACAGGATCGTTACAA-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-324,Macaque-324,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,21617,6234,0.0694444444444444,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGGATCGTTACAA,1169_B01,AIBS +AACATTGTCGTCAAGT-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Macaque-327,Macaque-327,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,37488,7549,0.166666666666667,Macaca Mulatta,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACATTGTCGTCAAGT,1169_B01,AIBS +AACTAGTGTCAAAGAA-1169_B01,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Macaque-472,Macaque-472,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,34666,7266,0.277777777777778,Macaca Mulatta,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AACTAGTGTCAAAGAA,1169_B01,AIBS +AATGCGCGTGGTTATG-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Macaque-321,Macaque-321,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,27774,7326,0.138888888888889,Macaca Mulatta,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATGCGCGTGGTTATG,1169_B01,AIBS +ACATTGCAGTTCCCAC-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-323,Macaque-323,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,28493,7218,0.138888888888889,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACATTGCAGTTCCCAC,1169_B01,AIBS +ATACCGGTCGTCATTT-1169_B01,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-485,Macaque-485,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,49071,8125,0.0555555555555556,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,ATACCGGTCGTCATTT,1169_B01,AIBS +CACTTAAAGTAACTCA-1169_B01,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-144,Macaque-144,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,34090,7060,0.152777777777778,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CACTTAAAGTAACTCA,1169_B01,AIBS +CGTGACATCAAGTGAG-1169_B01,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Macaque-318,Macaque-318,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,17651,5714,0.0972222222222222,Macaca Mulatta,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTGACATCAAGTGAG,1169_B01,AIBS +CTCATTTAGGTGAGAC-1169_B01,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Macaque-481,Macaque-481,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,43446,7840,0.194444444444444,Macaca Mulatta,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTCATTTAGGTGAGAC,1169_B01,AIBS +GATCGAGCAATGAAGC-1169_B01,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-478,Macaque-478,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,15221,5059,0.0555555555555556,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,GATCGAGCAATGAAGC,1169_B01,AIBS +GTTAACCAGAAAGGAA-1169_B01,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Macaque-473,Macaque-473,CL:0000003,1169_B01,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8913,0.0385,0.8204,0.2089,0.2719,0.2457,89844.4454,15459.5,0,132081,0.4481,0.9164,0.9564,0.9584,0.9394,642926851,4.9185,0.0159,0.9871,0.9341,55199.5542,3706.0,1896.0,0.3639,0.95,0.9492,0.9357,0.8885,0.9106,0.3025,0.094,0.9179,0.136,0.6879,0.4767,0.9501,0.1408,395008010,30081,0.9995,0.9403,27244,6627,0.166666666666667,Macaca Mulatta,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTTAACCAGAAAGGAA,1169_B01,AIBS +AAACAGCCAGGTTAAA-1106_A04,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Macaque-429,Macaque-429,CL:0000003,1106_A04,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8685,0.0302,0.7514,0.2104,0.2757,0.2553,92757.0481,11896.0,0,100819,0.6646,0.9164,0.9647,0.9515,0.9298,1097037608,4.7345,0.0233,0.9822,0.9189,67090.4385,5571.0,2267.0,0.6724,0.9143,0.9228,0.8908,0.9191,0.8617,0.3479,0.0719,0.9022,0.118,0.7124,0.4344,0.9289,0.0001,793478616,29951,0.9987,0.8196,15328,3722,0.18,Macaca Mulatta,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACAGCCAGGTTAAA,1106_A04,AIBS +GATCGATTCGCTAGTG-1106_A04,Nonneuron,Astro-Epen,Ependymal,Ependymal,Macaque-461,Macaque-461,CL:0000003,1106_A04,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8685,0.0302,0.7514,0.2104,0.2757,0.2553,92757.0481,11896.0,0,100819,0.6646,0.9164,0.9647,0.9515,0.9298,1097037608,4.7345,0.0233,0.9822,0.9189,67090.4385,5571.0,2267.0,0.6724,0.9143,0.9228,0.8908,0.9191,0.8617,0.3479,0.0719,0.9022,0.118,0.7124,0.4344,0.9289,0.0001,793478616,29951,0.9987,0.8196,4671,2405,0.0,Macaca Mulatta,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATCGATTCGCTAGTG,1106_A04,AIBS +TCATTTGGTTAGGATT-810_E02,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Macaque-164,Macaque-164,CL:0000003,810_E02,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaH,Ca,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8831,0.0348,0.8509,0.203,0.294,0.2739,124822.6725,49346.0,0,117395,0.4324,0.9124,0.9417,0.9511,0.9213,1019676412,5.1902,0.0115,0.9818,0.9613,114394.959,18363.0,4907.0,0.6053,0.9598,0.9619,0.9309,0.9494,0.9348,0.2835,0.0966,0.9175,0.1401,0.6808,0.4917,0.9503,0.1523,934492420,30209,0.9993,0.9413,14868,4919,0.0,Macaca Mulatta,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATTTGGTTAGGATT,810_E02,AIBS +GATGCAGCACTTCACT-948_D03,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Macaque-388,Macaque-388,CL:0000003,948_D03,Q21.26.002,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPe,GPe,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8955,0.0332,0.8892,0.2177,0.2677,0.2439,77900.8732,14196.5,0,112709,0.5698,0.9215,0.9626,0.959,0.9548,1169292107,4.9052,0.011,0.9837,0.9301,59706.3306,4552.0,2236.0,0.6358,0.967,0.9694,0.9527,0.9688,0.9689,0.2627,0.1089,0.9149,0.131,0.675,0.5187,0.9497,0.1784,896192023,30609,0.9995,0.9386,5240,2419,0.16,Macaca Mulatta,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATGCAGCACTTCACT,948_D03,AIBS +AAACATGCATTGGGAG-948_C03,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-147,Macaque-147,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,32067,6857,0.0875,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAACATGCATTGGGAG,948_C03,AIBS +AACAAAGGTTACAAAC-948_C03,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Macaque-486,Macaque-486,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,45621,7054,0.05,Macaca Mulatta,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AACAAAGGTTACAAAC,948_C03,AIBS +AACTAGTGTGGATTGC-948_C03,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-145,Macaque-145,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,30945,7194,0.15,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AACTAGTGTGGATTGC,948_C03,AIBS +GATTCAGGTTCGGTAA-948_C03,Nonneuron,Vascular,VLMC,VLMC,Macaque-351,Macaque-351,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,4003,2136,0.0,Macaca Mulatta,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATTCAGGTTCGGTAA,948_C03,AIBS +GGTGAGTAGGTTTACA-948_C03,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Macaque-299,Macaque-299,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,27317,6410,0.025,Macaca Mulatta,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTGAGTAGGTTTACA,948_C03,AIBS +GTAGCCATCTAATCTC-948_C03,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-302,Macaque-302,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,30830,7307,0.025,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTAGCCATCTAATCTC,948_C03,AIBS +TGGACAAAGGGACGCA-948_C03,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Macaque-319,Macaque-319,CL:0000003,948_C03,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9037,0.0292,0.8317,0.1837,0.2008,0.1835,99674.6561,20808.0,0,99276,0.5055,0.8948,0.9634,0.9495,0.8862,801782934,4.1919,0.0103,0.9811,0.8915,168323.3646,25733.0,6312.5,0.6347,0.9666,0.9688,0.9527,0.9544,0.975,0.2375,0.1231,0.9214,0.128,0.6703,0.5529,0.9517,0.248,1353993145,31353,0.9996,0.9456,25925,6477,0.025,Macaca Mulatta,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGACAAAGGGACGCA,948_C03,AIBS +AATCAGGAGTAGCCAT-1001_C06,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Macaque-474,Macaque-474,CL:0000003,1001_C06,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,SN-VTA,SN-VTA,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9014,0.0371,0.9063,0.2351,0.2967,0.2725,99786.8917,16564.5,0,127012,0.5409,0.9003,0.9577,0.9492,0.9121,688529553,5.8539,0.0162,0.9805,0.9125,93862.7438,5645.0,2446.0,0.5446,0.9595,0.9619,0.9472,0.9632,0.968,0.246,0.116,0.894,0.1322,0.6457,0.5126,0.9365,0.2936,647652932,30032,0.9995,0.9438,41377,8303,0.0289855072463768,Macaca Mulatta,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AATCAGGAGTAGCCAT,1001_C06,AIBS +ATATGGTGTGTTAAAC-1061_D04,Nonneuron,Vascular,Endo,Endo,Macaque-345,Macaque-345,CL:0000003,1061_D04,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8978,0.0339,0.8202,0.2296,0.2913,0.2672,59160.1185,26210.5,0,115114,0.3384,0.9235,0.9627,0.9557,0.9294,864447651,5.0794,0.0083,0.9859,0.9625,42831.0407,11061.5,4106.5,0.376,0.9473,0.9488,0.9345,0.908,0.9156,0.3234,0.1054,0.9306,0.1362,0.689,0.4685,0.9597,0.1445,625847167,30652,0.9993,0.9332,2162,1343,0.0,Macaca Mulatta,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATATGGTGTGTTAAAC,1061_D04,AIBS +CCAACCCGTGGCTTCC-1061_D04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-4,Macaque-4,CL:0000003,1061_D04,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8978,0.0339,0.8202,0.2296,0.2913,0.2672,59160.1185,26210.5,0,115114,0.3384,0.9235,0.9627,0.9557,0.9294,864447651,5.0794,0.0083,0.9859,0.9625,42831.0407,11061.5,4106.5,0.376,0.9473,0.9488,0.9345,0.908,0.9156,0.3234,0.1054,0.9306,0.1362,0.689,0.4685,0.9597,0.1445,625847167,30652,0.9993,0.9332,16168,4926,0.03,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCAACCCGTGGCTTCC,1061_D04,AIBS +GGTTTCTGTTTCGCCA-1061_D04,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB Dopa-GABA,Macaque-367,Macaque-367,CL:0000003,1061_D04,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8978,0.0339,0.8202,0.2296,0.2913,0.2672,59160.1185,26210.5,0,115114,0.3384,0.9235,0.9627,0.9557,0.9294,864447651,5.0794,0.0083,0.9859,0.9625,42831.0407,11061.5,4106.5,0.376,0.9473,0.9488,0.9345,0.908,0.9156,0.3234,0.1054,0.9306,0.1362,0.689,0.4685,0.9597,0.1445,625847167,30652,0.9993,0.9332,12121,4103,0.0,Macaca Mulatta,CS20250428_GROUP_0067,Interneuron,,OB|Dopa|GABA,61,,,,,#902f6b,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTTCTGTTTCGCCA,1061_D04,AIBS +AAAGGTTAGTCCTTTG-1222_A02,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Macaque-314,Macaque-314,CL:0000003,1222_A02,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,STH,STH,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9051,0.0332,0.915,0.2016,0.2413,0.2157,194955.3254,45340.0,0,113590,0.5093,0.9176,0.9462,0.9335,0.8978,2091675686,4.9057,0.0132,0.9842,0.9463,61523.3724,16618.0,5229.0,0.4183,0.9289,0.9336,0.9167,0.9215,0.9385,0.2431,0.1247,0.9329,0.1236,0.6846,0.5631,0.959,0.1307,660084262,30458,0.9996,0.9399,30418,7123,0.0,Macaca Mulatta,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAAGGTTAGTCCTTTG,1222_A02,AIBS +ACTCAGTAGGATCCGC-774_B06,Nonneuron,Immune,Macrophage,BAM,Macaque-442,Macaque-442,CL:0000003,774_B06,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9098,0.043,0.9454,0.2687,0.3909,0.3604,86650.2858,17543.0,0,145437,0.4942,0.8782,0.9328,0.9399,0.9019,1000550850,6.837,0.0125,0.9783,0.9641,121470.8219,16798.0,4867.0,0.6189,0.9562,0.9583,0.9237,0.9517,0.9346,0.2478,0.1002,0.9312,0.1357,0.6953,0.5451,0.958,0.156,1402623580,31164,0.9994,0.9443,2757,1495,0.0,Macaca Mulatta,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACTCAGTAGGATCCGC,774_B06,AIBS +CCACAGGGTTACTTCA-774_B06,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Macaque-63,Macaque-63,CL:0000003,774_B06,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9098,0.043,0.9454,0.2687,0.3909,0.3604,86650.2858,17543.0,0,145437,0.4942,0.8782,0.9328,0.9399,0.9019,1000550850,6.837,0.0125,0.9783,0.9641,121470.8219,16798.0,4867.0,0.6189,0.9562,0.9583,0.9237,0.9517,0.9346,0.2478,0.1002,0.9312,0.1357,0.6953,0.5451,0.958,0.156,1402623580,31164,0.9994,0.9443,10120,3846,0.0,Macaca Mulatta,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CCACAGGGTTACTTCA,774_B06,AIBS +ACCACATAGGAATAAC-942_A05,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Macaque-85,Macaque-85,CL:0000003,942_A05,QM21.26.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,GPi,GPi,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.9112,0.0342,0.8763,0.2139,0.2578,0.234,154527.1847,28291.0,0,116888,0.521,0.9204,0.9713,0.9579,0.9021,850208570,4.802,0.0095,0.9848,0.9012,243593.8942,6324.0,2802.0,0.8243,0.9643,0.9657,0.9543,0.9708,0.9665,0.1489,0.1163,0.9333,0.1615,0.6555,0.6193,0.962,0.0635,1340253606,30171,0.9993,0.9594,36220,8201,0.181818181818182,Macaca Mulatta,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACCACATAGGAATAAC,942_A05,AIBS +CTTCTAAGTATTTGCC-988_B05,Nonneuron,Astro-Epen,Ependymal,Ependymal,Macaque-463,Macaque-463,CL:0000003,988_B05,Q21.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaH,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8999,0.0431,0.9201,0.231,0.3569,0.332,79386.4189,36376.5,0,145601,0.4619,0.9161,0.9608,0.9509,0.9371,817838888,6.0725,0.0115,0.9802,0.9445,52257.5442,13310.0,4260.0,0.4281,0.9608,0.9626,0.9458,0.9474,0.9462,0.2584,0.1005,0.9216,0.1367,0.6844,0.5241,0.9562,0.1653,538357220,29931,0.9994,0.9324,5955,2977,0.0,Macaca Mulatta,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTCTAAGTATTTGCC,988_B05,AIBS +CAACTAATCCTAAATG-911_F03,Nonneuron,Immune,Microglia,Microglia,Macaque-436,Macaque-436,CL:0000003,911_F03,Q19.26.010,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuC,Pu,Unknown,Unknown,Female,PATO:0000383,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8833,0.0275,0.8024,0.2009,0.2522,0.2326,104029.1394,22734.0,0,92514,0.5583,0.8926,0.9401,0.9337,0.8987,848253603,4.7856,0.0158,0.9784,0.9372,219063.6781,8675.0,2893.5,0.8669,0.9615,0.9625,0.9509,0.9756,0.9647,0.3486,0.0809,0.9279,0.1127,0.7343,0.4648,0.951,0.0183,1786245231,30082,0.9988,0.8187,2499,1362,0.0121951219512195,Macaca Mulatta,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CAACTAATCCTAAATG,911_F03,AIBS +ATGCGATTCATTCATC-2069_C04,Nonneuron,Immune,Macrophage,BAM,Macaque-443,Macaque-443,CL:0000003,2069_C04,QM23.50.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8844,0.0251,0.7242,0.2034,0.2139,0.1964,127330.6144,23425.5,0,84962,0.4449,0.9058,0.936,0.932,0.9085,1113378892,4.4972,0.017,0.975,0.8246,145656.4868,6125.0,2606.5,0.8088,0.9742,0.9634,0.9663,0.9831,0.98,0.2556,0.095,0.9409,0.1149,0.731,0.5674,0.9621,0.0925,1273620321,30114,0.9976,0.917,2342,1433,0.0,Macaca Mulatta,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGCGATTCATTCATC,2069_C04,AIBS +ATGGCTAGTTAGCTGA-2069_C04,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Macaque-13,Macaque-13,CL:0000003,2069_C04,QM23.50.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,NAC,NAC,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8844,0.0251,0.7242,0.2034,0.2139,0.1964,127330.6144,23425.5,0,84962,0.4449,0.9058,0.936,0.932,0.9085,1113378892,4.4972,0.017,0.975,0.8246,145656.4868,6125.0,2606.5,0.8088,0.9742,0.9634,0.9663,0.9831,0.98,0.2556,0.095,0.9409,0.1149,0.731,0.5674,0.9621,0.0925,1273620321,30114,0.9976,0.917,36302,6754,0.183908045977011,Macaca Mulatta,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGGCTAGTTAGCTGA,2069_C04,AIBS +GGCTGAGAGTTAGTTG-2067_B02,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Macaque-230,Macaque-230,CL:0000003,2067_B02,QM23.50.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,PuR,Pu,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8988,0.0389,0.7771,0.2138,0.2886,0.2643,140350.6549,33546.0,0,133067,0.4012,0.9236,0.9505,0.9466,0.93,1185401631,5.3451,0.0107,0.9763,0.8619,83720.763,4735.5,2252.0,0.725,0.9757,0.9646,0.9653,0.9795,0.9399,0.2215,0.0975,0.9445,0.1168,0.7303,0.6028,0.9656,0.0973,707105564,29621,0.9984,0.9278,19460,5453,0.214285714285714,Macaca Mulatta,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCTGAGAGTTAGTTG,2067_B02,AIBS +ATAATGGCACCAGGTT-2072_C07,Nonneuron,Astro-Epen,Ependymal,Ependymal,Macaque-462,Macaque-462,CL:0000003,2072_C07,QM23.50.003,10x multiome,EFO_0030059,Macaque,NCBITaxon:9544,Adult,CaB,Ca,Unknown,Unknown,Male,PATO:0000384,unknown,Macaca Mulatta,normal,PATO:0000461,nucleus,True,0.8805,0.03,0.8066,0.2138,0.2515,0.2314,113677.194,26029.0,0,102925,0.4472,0.9004,0.9459,0.9408,0.9254,1162804017,5.2395,0.0151,0.9736,0.9059,122569.2852,8024.0,3140.0,0.7213,0.9647,0.9526,0.9567,0.9485,0.9662,0.2584,0.096,0.9361,0.1315,0.7085,0.5436,0.9614,0.1043,1253761218,30646,0.9979,0.9124,15223,5144,0.0,Macaca Mulatta,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATAATGGCACCAGGTT,2072_C07,AIBS diff --git a/bkbit/data/ait_output/Marmoset_cluster_info.pkl b/bkbit/data/ait_output/Marmoset_cluster_info.pkl new file mode 100644 index 0000000..50deacf Binary files /dev/null and b/bkbit/data/ait_output/Marmoset_cluster_info.pkl differ diff --git a/bkbit/data/ait_output/Marmoset_taxonomy.csv b/bkbit/data/ait_output/Marmoset_taxonomy.csv new file mode 100644 index 0000000..a1e9e47 --- /dev/null +++ b/bkbit/data/ait_output/Marmoset_taxonomy.csv @@ -0,0 +1,595 @@ +cell_label,Neighborhood,Class,Subclass,Group,Cluster,cluster_id,cell_type_ontology_term,load_id,donor_id,assay,assay_ontology_term_id,organism,organism_ontology_term_id,development_stage,anatomical_region,anatomical_region_merged,anatomical_region_ontology_term_id,brain_region_ontology_term_id,self_reported_sex,self_reported_sex_ontology_term_id,self_reported_ethnicity,self_reported_ethnicity_ontology_term_id,disease,disease_ontology_term_id,suspension_type,is_primary_data,RNA_library_creation_date,RNA_library_prep_set,RNA_library_name,RNA_tapestation_avg_size_bp,RNA_library_num_cycles,RNA_lib_quantification_ng,RNA_library_pool_name,ATAC_library_creation_date,ATAC_library_prep_set,ATAC_library_name,ATAC_tapestation_avg_size_bp,ATAC_library_num_cycles,ATAC_lib_quantification_ng,ATAC_library_pool_name,RNA_r1_index,RNA_r2_index,ATAC_index,total_counts,total_genes,doublet_score,organism_sci,accession_group,embedding_set,CL:ID_group,tokens_group,display_order_group,literature_support,literature_name_short,literature_name_long,curated_markers,color_hex_group,color_group,accession_subclass,CL:ID_subclass,tokens_subclass,display_order_subclass,color_hex_subclass,color_subclass,accession_class,CL:ID_class,tokens_class,display_order_class,color_hex_class,color_class,accession_neighborhood,CL:ID_neighborhood,tokens_neighborhood,display_order_neighborhood,color_hex_neighborhood,color_neighborhood,cell_barcode,barcoded_cell_sample_label,alignment_job_id,alignment_job_database +GTTCCTGGTTAGCATG-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-1,Marmoset-1,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,33732,6363,0.019617335870862,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTCCTGGTTAGCATG,P0005_1,240822,Princeton +GGTTACCCACCACAAC-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-82,Marmoset-82,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,23914,5487,0.0337918475270271,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTACCCACCACAAC,P0005_1,240822,Princeton +CCATATTTCTGCAACG-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-83,Marmoset-83,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,23099,5247,0.0094511797651648,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCATATTTCTGCAACG,P0005_1,240822,Princeton +ATTGACTCAACTAGAA-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-96,Marmoset-96,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,22429,6415,0.590108692646027,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTGACTCAACTAGAA,P0005_1,240822,Princeton +GGTCCATCATAATTGC-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Marmoset-60,Marmoset-60,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,19041,4360,0.0704223737120628,Callithrix jacchus,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTCCATCATAATTGC,P0005_1,240822,Princeton +TTGCTTTAGTTGCCTC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-118,Marmoset-118,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,19035,4665,0.208685219287872,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCTTTAGTTGCCTC,P0005_1,240822,Princeton +ATTAGCGGTAAGGTCC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-86,Marmoset-86,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,16524,4348,0.0049059269949793,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTAGCGGTAAGGTCC,P0005_1,240822,Princeton +GCAAGTGCAATGCCCG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-61,Marmoset-61,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,16073,3845,0.0154388742521405,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAAGTGCAATGCCCG,P0005_1,240822,Princeton +CTAGCGGGTTTATTCG-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-122,Marmoset-122,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,16068,4405,0.0075629586353898,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAGCGGGTTTATTCG,P0005_1,240822,Princeton +CGAAGCCTCAATGTCA-P0005_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-140,Marmoset-140,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,16179,4784,0.141660541296005,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAAGCCTCAATGTCA,P0005_1,240822,Princeton +ATTCCTAGTCACCAAA-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-151,Marmoset-151,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,15619,4393,0.180065631866455,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCCTAGTCACCAAA,P0005_1,240822,Princeton +GTTCCTTCAGTAGGTG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-72,Marmoset-72,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,15040,4336,0.0045147063210606,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTCCTTCAGTAGGTG,P0005_1,240822,Princeton +TTAGCCTGTGGATTAT-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Marmoset-195,Marmoset-195,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,14187,3839,0.0623068101704121,Callithrix jacchus,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAGCCTGTGGATTAT,P0005_1,240822,Princeton +TGATGATGTGGAAGGC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-85,Marmoset-85,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,14124,4083,0.0107031147927046,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGATGATGTGGAAGGC,P0005_1,240822,Princeton +GGGAATATCATTGTCT-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-206,Marmoset-206,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,13264,3816,0.180977389216423,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGAATATCATTGTCT,P0005_1,240822,Princeton +TAGTCAATCCGCTAGA-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-120,Marmoset-120,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,12932,4014,0.240091174840927,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGTCAATCCGCTAGA,P0005_1,240822,Princeton +GTTACCTGTAGCTAAT-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-155,Marmoset-155,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,12589,3856,0.157207831740379,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTACCTGTAGCTAAT,P0005_1,240822,Princeton +TTCAGCACACCAGCAT-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Marmoset-153,Marmoset-153,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,11907,3815,0.0034350550267845,Callithrix jacchus,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTCAGCACACCAGCAT,P0005_1,240822,Princeton +ACCCTCCCACCCTCAC-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-208,Marmoset-208,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,11915,4064,0.158452421426773,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCTCCCACCCTCAC,P0005_1,240822,Princeton +GGCCAACTCACCTGCT-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-65,Marmoset-65,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,11682,4275,0.0301294587552547,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCCAACTCACCTGCT,P0005_1,240822,Princeton +TCACGGATCTTCAATC-P0005_1,Nonneuron,OPC-Oligo,OPC,OPC,Marmoset-236,Marmoset-236,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,11370,4046,0.0454978533089161,Callithrix jacchus,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCACGGATCTTCAATC,P0005_1,240822,Princeton +AGGTTTATCTTAGGGT-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-135,Marmoset-135,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,10685,3085,0.0078519647940993,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTTTATCTTAGGGT,P0005_1,240822,Princeton +CTTTGGTGTTGAAGCC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Marmoset-196,Marmoset-196,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,10506,3349,0.018033379688859,Callithrix jacchus,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTTGGTGTTGAAGCC,P0005_1,240822,Princeton +TATGCATCAGGTTACC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Marmoset-199,Marmoset-199,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,10598,3732,0.0568455457687378,Callithrix jacchus,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATGCATCAGGTTACC,P0005_1,240822,Princeton +CCGATGCAGCTTTGGG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-152,Marmoset-152,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,10238,3468,0.0064055328257381,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGATGCAGCTTTGGG,P0005_1,240822,Princeton +TACAGCTAGCCTAATA-P0005_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-141,Marmoset-141,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,10182,3673,0.0478287860751152,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACAGCTAGCCTAATA,P0005_1,240822,Princeton +GCAGGACCAACTAGCC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-198,Marmoset-198,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9662,3575,0.16453529894352,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAGGACCAACTAGCC,P0005_1,240822,Princeton +ATGCATTCAGCATTAT-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-90,Marmoset-90,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9679,3802,0.0080029563978314,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGCATTCAGCATTAT,P0005_1,240822,Princeton +GCTTGACCAAGCTTTG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Marmoset-239,Marmoset-239,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9428,3575,0.190702706575394,Callithrix jacchus,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTTGACCAAGCTTTG,P0005_1,240822,Princeton +TAGCCTGAGGCAGGTG-P0005_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-143,Marmoset-143,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9280,3482,0.0948248952627182,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCCTGAGGCAGGTG,P0005_1,240822,Princeton +TCTGTGACAATATACC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-134,Marmoset-134,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9159,3326,0.0074474387802183,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTGTGACAATATACC,P0005_1,240822,Princeton +GCCACTAAGCTAGAAG-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-2,Marmoset-2,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9171,3402,0.0232530292123556,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCCACTAAGCTAGAAG,P0005_1,240822,Princeton +TACTTGTTCACAGCCA-P0005_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Marmoset-278,Marmoset-278,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,9104,3760,0.212009608745575,Callithrix jacchus,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACTTGTTCACAGCCA,P0005_1,240822,Princeton +CATCCTCAGGATTGCT-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-73,Marmoset-73,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,8347,3548,0.183204874396324,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATCCTCAGGATTGCT,P0005_1,240822,Princeton +GCAGGTTGTATTGCAG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-80,Marmoset-80,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,8159,3471,0.0525610074400902,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAGGTTGTATTGCAG,P0005_1,240822,Princeton +ATTACGTCATCCCGCT-P0005_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Marmoset-279,Marmoset-279,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,8014,3259,0.0859864726662636,Callithrix jacchus,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTACGTCATCCCGCT,P0005_1,240822,Princeton +TCTAACTTCTCACTCA-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-66,Marmoset-66,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,7514,2851,0.0051124435849487,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTAACTTCTCACTCA,P0005_1,240822,Princeton +GACTTGGTCTAATTGG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-75,Marmoset-75,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,7640,3281,0.0171487033367157,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GACTTGGTCTAATTGG,P0005_1,240822,Princeton +GTTAGACTCTCAATGA-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-88,Marmoset-88,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,7551,3317,0.0075481128878891,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTAGACTCTCAATGA,P0005_1,240822,Princeton +TTGTTTGGTGTCCTGC-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Striosome MSN,Marmoset-78,Marmoset-78,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,7215,3157,0.0070218490436673,Callithrix jacchus,CS20250428_GROUP_0054,LGE,CL:4030049,STRd|D2 Striosome MSN,55,He et al. 2021,D2-Striosome,,KCNIP1,#ff9896,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGTTTGGTGTCCTGC,P0005_1,240822,Princeton +ACTATGTCACTAGGTC-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Marmoset-197,Marmoset-197,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,6610,2739,0.006532737519592,Callithrix jacchus,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTATGTCACTAGGTC,P0005_1,240822,Princeton +ACCATTAAGAACCTAC-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-209,Marmoset-209,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,6065,2205,0.0623947083950043,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCATTAAGAACCTAC,P0005_1,240822,Princeton +CTGCTATGTCCACAAA-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-210,Marmoset-210,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,5669,2345,0.0495366305112839,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGCTATGTCCACAAA,P0005_1,240822,Princeton +GTCGGTTCACCCACAG-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-211,Marmoset-211,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,5488,2691,0.266796082258224,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCGGTTCACCCACAG,P0005_1,240822,Princeton +ATATGCTCAATTAAGG-P0005_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-353,Marmoset-353,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,5206,2715,0.014051578938961,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATGCTCAATTAAGG,P0005_1,240822,Princeton +ATTTGCGCACACTAAT-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-3,Marmoset-3,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4980,2097,0.0121576506644487,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTTGCGCACACTAAT,P0005_1,240822,Princeton +CATATCGCACGAACAG-P0005_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-297,Marmoset-297,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4823,2497,0.0389405339956284,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATATCGCACGAACAG,P0005_1,240822,Princeton +AGCACTTAGCATTTCT-P0005_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-202,Marmoset-202,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4621,2282,0.0024875269737094,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCACTTAGCATTTCT,P0005_1,240822,Princeton +CTGTTGGAGAGGGACT-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-215,Marmoset-215,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4578,2182,0.153415203094482,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGTTGGAGAGGGACT,P0005_1,240822,Princeton +GTATTCAAGCATGTTA-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-16,Marmoset-16,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4424,2108,0.0019839345477521,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTATTCAAGCATGTTA,P0005_1,240822,Princeton +AAAGCTTGTTCCGGCT-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-11,Marmoset-11,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4090,2370,0.0297587309032679,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AAAGCTTGTTCCGGCT,P0005_1,240822,Princeton +GGGTTTGTCCGTGACA-P0005_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Marmoset-280,Marmoset-280,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4209,2475,0.0638681352138519,Callithrix jacchus,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGTTTGTCCGTGACA,P0005_1,240822,Princeton +GGCCTTCGTGCGCGTA-P0005_1,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-427,Marmoset-427,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,4102,2090,0.0053126108832657,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCCTTCGTGCGCGTA,P0005_1,240822,Princeton +GATCAGTTCGAGCAAA-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-7,Marmoset-7,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,3828,1715,0.0021058795973658,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GATCAGTTCGAGCAAA,P0005_1,240822,Princeton +TTAAAGGCAGCACGAA-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-216,Marmoset-216,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,3264,2002,0.0214982088655233,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAAAGGCAGCACGAA,P0005_1,240822,Princeton +CGGAGTCTCACAGCGC-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-18,Marmoset-18,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,3035,1725,0.0016849939711391,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGGAGTCTCACAGCGC,P0005_1,240822,Princeton +CACAAGCGTATCTGGA-P0005_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-12,Marmoset-12,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,3002,1594,0.0012277067871764,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CACAAGCGTATCTGGA,P0005_1,240822,Princeton +ATTCCGGAGGCTACAT-P0005_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-511,Marmoset-511,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2991,1739,0.0152664603665471,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTCCGGAGGCTACAT,P0005_1,240822,Princeton +GTTCTCATCTTAAGTG-P0005_1,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-431,Marmoset-431,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2815,1660,0.0108690019696951,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTCTCATCTTAAGTG,P0005_1,240822,Princeton +GCTAAGAAGTCATTAG-P0005_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Marmoset-240,Marmoset-240,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2666,1759,0.0027126083150506,Callithrix jacchus,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTAAGAAGTCATTAG,P0005_1,240822,Princeton +ACTTAGGGTTGCGTAA-P0005_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-218,Marmoset-218,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2547,1567,0.0957665517926216,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTAGGGTTGCGTAA,P0005_1,240822,Princeton +TTACGTTTCAAAGGCA-P0005_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-507,Marmoset-507,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2598,1527,0.0067150555551052,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTACGTTTCAAAGGCA,P0005_1,240822,Princeton +CATGCGGGTACGGGTT-P0005_1,Nonneuron,OPC-Oligo,OPC,OPC,Marmoset-625,Marmoset-625,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2316,1488,0.0111137880012393,Callithrix jacchus,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATGCGGGTACGGGTT,P0005_1,240822,Princeton +CTCATGACACTATGGC-P0005_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-299,Marmoset-299,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2074,1351,0.0017132512293756,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCATGACACTATGGC,P0005_1,240822,Princeton +GGTTACCCAGTAGGTG-P0005_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-302,Marmoset-302,CL:0000003,P0005_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_C6,487,16,476,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_B1,404,9,14.78,BR_PXA_240220_1,SI-TT-C6_i7,SI-TT-C6_b(i5),SI-NA-B1,2122,1502,0.0025830592494458,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTACCCAGTAGGTG,P0005_1,240822,Princeton +ATGGCTGTCTTCAATC-P0005_2,Nonneuron,OPC-Oligo,OPC,OPC,Marmoset-235,Marmoset-235,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,27064,6231,0.0102883735671639,Callithrix jacchus,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGGCTGTCTTCAATC,P0005_2,240822,Princeton +CGGACCTAGTCATTAG-P0005_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-304,Marmoset-304,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,25487,6017,0.0392707400023937,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGACCTAGTCATTAG,P0005_2,240822,Princeton +AGCGGATAGCTTAACA-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-100,Marmoset-100,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,24698,5963,0.0188671629875898,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGCGGATAGCTTAACA,P0005_2,240822,Princeton +ATTAGTCCACAGAAAC-P0005_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-79,Marmoset-79,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,22278,5762,0.000561413471587,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTAGTCCACAGAAAC,P0005_2,240822,Princeton +ATTGTCCGTCTTACTA-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-101,Marmoset-101,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,21305,6319,0.0248477887362242,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTGTCCGTCTTACTA,P0005_2,240822,Princeton +GCTGCAATCTACCTAT-P0005_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-87,Marmoset-87,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,21352,6002,0.0004580850945785,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTGCAATCTACCTAT,P0005_2,240822,Princeton +TACCTGCTCGGTTAGT-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-98,Marmoset-98,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,17988,5401,0.210857838392258,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACCTGCTCGGTTAGT,P0005_2,240822,Princeton +CGAACAAAGCACCACA-P0005_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-133,Marmoset-133,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,17030,4943,0.0013521990040317,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAACAAAGCACCACA,P0005_2,240822,Princeton +GCCTACTTCCTCGATC-P0005_2,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-212,Marmoset-212,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,16593,4893,0.299949318170547,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCTACTTCCTCGATC,P0005_2,240822,Princeton +ACACTAATCGTTTCTG-P0005_2,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-145,Marmoset-145,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,16581,5229,0.371489405632019,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACACTAATCGTTTCTG,P0005_2,240822,Princeton +CTTACCTCACAAGCCT-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-103,Marmoset-103,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,14708,4600,0.0877422019839287,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTACCTCACAAGCCT,P0005_2,240822,Princeton +CATTATCTCAGCACGC-P0005_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-510,Marmoset-510,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,12925,4477,0.138338208198547,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATTATCTCAGCACGC,P0005_2,240822,Princeton +GGCCTTCGTTGGCGTG-P0005_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Marmoset-201,Marmoset-201,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,12903,4513,0.0643026977777481,Callithrix jacchus,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCCTTCGTTGGCGTG,P0005_2,240822,Princeton +TACTAAGTCAACCAAC-P0005_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-512,Marmoset-512,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,12244,3592,0.0208667349070311,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACTAAGTCAACCAAC,P0005_2,240822,Princeton +GCCACTAAGGATCCGC-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-9,Marmoset-9,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,9756,3037,0.0013841742184013,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCCACTAAGGATCCGC,P0005_2,240822,Princeton +AGGTTAACAAATACCT-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-8,Marmoset-8,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,8560,2977,0.0361531488597393,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGTTAACAAATACCT,P0005_2,240822,Princeton +TCTCCTCGTTAGCATG-P0005_2,Nonneuron,OPC-Oligo,OPC,OPC,Marmoset-626,Marmoset-626,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,7913,3032,0.047537550330162,Callithrix jacchus,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCTCCTCGTTAGCATG,P0005_2,240822,Princeton +GTAGCGCTCCAGGTTG-P0005_2,Nonneuron,OPC-Oligo,OPC,OPC,Marmoset-627,Marmoset-627,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,6408,2406,0.0766648277640343,Callithrix jacchus,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTAGCGCTCCAGGTTG,P0005_2,240822,Princeton +CGGGTATGTTAAGGTT-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-105,Marmoset-105,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,5936,2792,0.179876387119293,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGGGTATGTTAAGGTT,P0005_2,240822,Princeton +GAGGGAGCACATAGCC-P0005_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-508,Marmoset-508,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,5181,2420,0.0022318284027278,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGGGAGCACATAGCC,P0005_2,240822,Princeton +TGGCGGTTCTCACATT-P0005_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-669,Marmoset-669,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,5008,2629,0.138736844062805,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGGCGGTTCTCACATT,P0005_2,240822,Princeton +TTGCTTAGTTACTAGG-P0005_2,Nonneuron,OPC-Oligo,OPC,OPC,Marmoset-628,Marmoset-628,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,4790,2175,0.0014376896433532,Callithrix jacchus,CS20250428_GROUP_0023,Nonneuron,CL:0002453,OPC,12,Siletti et al. 2023,,,,#f5e689,,CS20250428_SUBCL_0020,CL:0002453,OPC,8,#c68ae4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTGCTTAGTTACTAGG,P0005_2,240822,Princeton +GCCGTGAGTTTACGTC-P0005_2,Nonneuron,Vascular,Endo,Endo,Marmoset-685,Marmoset-685,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,4406,2327,0.0417359136044979,Callithrix jacchus,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GCCGTGAGTTTACGTC,P0005_2,240822,Princeton +TTACGTTTCTTGATGA-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-17,Marmoset-17,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,3966,2015,0.0004673652292694,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTACGTTTCTTGATGA,P0005_2,240822,Princeton +CATGCGGGTCCTCCAA-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-4,Marmoset-4,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,4024,1794,0.0019754553213715,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATGCGGGTCCTCCAA,P0005_2,240822,Princeton +AGGATGTCACTGGCTG-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-19,Marmoset-19,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,3721,2030,0.281795263290405,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGATGTCACTGGCTG,P0005_2,240822,Princeton +TCTTTGTAGCGATAGA-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-99,Marmoset-99,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,3382,2047,0.306456804275513,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCTTTGTAGCGATAGA,P0005_2,240822,Princeton +GGTCAAGCAACACCTA-P0005_2,Nonneuron,Immune,Microglia,Microglia,Marmoset-708,Marmoset-708,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2909,1856,0.0009905635379254,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGTCAAGCAACACCTA,P0005_2,240822,Princeton +TCTCAAGCACAGCCTG-P0005_2,Nonneuron,Immune,Microglia,Microglia,Marmoset-709,Marmoset-709,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2693,1596,7.23702614777721e-05,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCTCAAGCACAGCCTG,P0005_2,240822,Princeton +CCTTCAATCCTAATAG-P0005_2,Nonneuron,Astro-Epen,Ependymal,Ependymal,Marmoset-662,Marmoset-662,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,3114,1921,0.0014343945076689,Callithrix jacchus,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCTTCAATCCTAATAG,P0005_2,240822,Princeton +GGATAACCAAGACTCC-P0005_2,Nonneuron,Vascular,Endo,Endo,Marmoset-689,Marmoset-689,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2674,1812,0.0020773990545421,Callithrix jacchus,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGATAACCAAGACTCC,P0005_2,240822,Princeton +TTTAGGATCAATCATG-P0005_2,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STRd Cholinergic GABA,Marmoset-720,Marmoset-720,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2790,1639,0.32747682929039,Callithrix jacchus,CS20250428_GROUP_0048,Interneuron,,STRd|Cholinergic|GABA,33,,,,,#6fc7b2,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTAGGATCAATCATG,P0005_2,240822,Princeton +AATGCAACACCTGCCT-P0005_2,Nonneuron,Immune,Microglia,Microglia,Marmoset-712,Marmoset-712,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2601,1492,0.0001621156552573,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATGCAACACCTGCCT,P0005_2,240822,Princeton +TTTCCGGGTGGGTGAA-P0005_2,Nonneuron,Vascular,VLMC,VLMC,Marmoset-692,Marmoset-692,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2678,1609,0.0367290489375591,Callithrix jacchus,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTTCCGGGTGGGTGAA,P0005_2,240822,Princeton +AATCCCTGTGTTAAAC-P0005_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-20,Marmoset-20,CL:0000003,P0005_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231010,LPRNXR_231010_1,LPRNXR_231010_1_D6,467,16,923,BR_PXR_240604_1,231004,LPRNXA_231004_1,LPRNXA_231004_1_C1,426,7,69.7,BR_PXA_240220_1,SI-TT-D6_i7,SI-TT-D6_b(i5),SI-NA-C1,2108,1158,0.0061121671460568,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AATCCCTGTGTTAAAC,P0005_2,240822,Princeton +GCAGCTATCTCGACCT-P0008_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-726,Marmoset-726,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,24709,5796,0.224391162395477,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAGCTATCTCGACCT,P0008_1,231224,Princeton +ACGGTTAGTAACCAGC-P0008_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Marmoset-775,Marmoset-775,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,19819,5441,0.0024636397138238,Callithrix jacchus,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGGTTAGTAACCAGC,P0008_1,231224,Princeton +CTCCGGACAACCTGGT-P0008_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-777,Marmoset-777,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,15110,5147,0.0004930719733238,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCCGGACAACCTGGT,P0008_1,231224,Princeton +ACCCTGTTCCGTTAAA-P0008_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-727,Marmoset-727,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,12853,4286,0.0016154728364199,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCTGTTCCGTTAAA,P0008_1,231224,Princeton +GCGGTTATCCATTACT-P0008_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-305,Marmoset-305,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,12640,4069,0.0140357846394181,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGGTTATCCATTACT,P0008_1,231224,Princeton +GGTTATGGTAGCTAGC-P0008_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-81,Marmoset-81,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,11906,3778,0.001501714810729,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTATGGTAGCTAGC,P0008_1,231224,Princeton +GAGGCTACAATCCTGA-P0008_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-131,Marmoset-131,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,10943,4125,0.0066324458457529,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGGCTACAATCCTGA,P0008_1,231224,Princeton +GAGAACCAGACTCGCA-P0008_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-911,Marmoset-911,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,9960,3558,0.0024360199458897,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGAACCAGACTCGCA,P0008_1,231224,Princeton +ATATGCATCCAAGTTA-P0008_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-728,Marmoset-728,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,9558,3812,0.421059399843216,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATGCATCCAAGTTA,P0008_1,231224,Princeton +TCCATGCTCTGGTCCT-P0008_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-13,Marmoset-13,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,9025,3165,0.149878159165382,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCCATGCTCTGGTCCT,P0008_1,231224,Princeton +TGTTCATTCTTGTCCA-P0008_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-15,Marmoset-15,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,8720,3652,0.200851574540138,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGTTCATTCTTGTCCA,P0008_1,231224,Princeton +CCGTTATGTTCAAGCA-P0008_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-91,Marmoset-91,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,8458,3235,9.52150439843535e-05,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGTTATGTTCAAGCA,P0008_1,231224,Princeton +TCTACCTCATTGTTGG-P0008_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-354,Marmoset-354,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,8423,3247,0.0001081464506569,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTACCTCATTGTTGG,P0008_1,231224,Princeton +CTCACAACACCATATG-P0008_1,Nonneuron,Astro-Epen,Ependymal,Ependymal,Marmoset-664,Marmoset-664,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,7508,3340,0.163459286093712,Callithrix jacchus,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTCACAACACCATATG,P0008_1,231224,Princeton +AGAGAAGCAACCTAAT-P0008_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-355,Marmoset-355,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,6597,2938,0.0003423207090236,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGAGAAGCAACCTAAT,P0008_1,231224,Princeton +CTAATGTCACCAACCG-P0008_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-10,Marmoset-10,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,6388,2557,0.0094996793195605,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTAATGTCACCAACCG,P0008_1,231224,Princeton +AAACAGCCAATAACGA-P0008_1,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-434,Marmoset-434,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,6190,2585,0.0004780105664394,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAACAGCCAATAACGA,P0008_1,231224,Princeton +CATAATGTCTTACTCG-P0008_1,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo PLEKHG1,Marmoset-14,Marmoset-14,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,6002,2624,0.0056877131573855,Callithrix jacchus,CS20250428_GROUP_0026,Nonneuron,CL:0000128,Oligo|PLEKHG1,10,Siletti et al. 2023,,,,#401e66,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATAATGTCTTACTCG,P0008_1,231224,Princeton +GGACTAAAGCAGGTTT-P0008_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-310,Marmoset-310,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,5754,2843,0.0068083209916949,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGACTAAAGCAGGTTT,P0008_1,231224,Princeton +TCTCGCCCAGAAATGC-P0008_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-219,Marmoset-219,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,5704,2694,0.0154308388009667,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTCGCCCAGAAATGC,P0008_1,231224,Princeton +TGTCATAAGTCACGAT-P0008_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-729,Marmoset-729,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,5653,2646,0.00138399831485,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTCATAAGTCACGAT,P0008_1,231224,Princeton +TCCTTTACAATTAAGG-P0008_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-912,Marmoset-912,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,5468,2556,0.0039873267523944,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCTTTACAATTAAGG,P0008_1,231224,Princeton +AACCTCACAGATTCAT-P0008_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-515,Marmoset-515,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,5363,2549,0.0048163053579628,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AACCTCACAGATTCAT,P0008_1,231224,Princeton +ATCACACAGCTATATG-P0008_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-217,Marmoset-217,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,5162,2431,0.0092537030577659,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCACACAGCTATATG,P0008_1,231224,Princeton +TTTGTGGCAGTATGTT-P0008_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-315,Marmoset-315,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,4614,2425,0.0015438065165653,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGTGGCAGTATGTT,P0008_1,231224,Princeton +TTTGCGGAGCGATAGA-P0008_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-730,Marmoset-730,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,4446,2377,0.0001463822845835,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGCGGAGCGATAGA,P0008_1,231224,Princeton +GAACACAAGTTCCTCA-P0008_1,Nonneuron,OPC-Oligo,COP,COP,Marmoset-237,Marmoset-237,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,3296,1782,0.0001913247542688,Callithrix jacchus,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAACACAAGTTCCTCA,P0008_1,231224,Princeton +TGGTCAGTCCCATAGG-P0008_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Marmoset-281,Marmoset-281,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,3132,1977,6.98689691489562e-05,Callithrix jacchus,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGTCAGTCCCATAGG,P0008_1,231224,Princeton +CTGGATGTCCCGTTTA-P0008_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-670,Marmoset-670,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,3064,1696,0.0001604917779332,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTGGATGTCCCGTTTA,P0008_1,231224,Princeton +TAGCGGACATAGCTGC-P0008_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-224,Marmoset-224,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2948,1736,0.0013958439230918,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCGGACATAGCTGC,P0008_1,231224,Princeton +ACCAAGTTCGTTAGTA-P0008_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-778,Marmoset-778,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2883,1908,0.000525887007825,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAAGTTCGTTAGTA,P0008_1,231224,Princeton +ATATGTCCAAGCTAAA-P0008_1,Nonneuron,Immune,Macrophage,BAM,Marmoset-993,Marmoset-993,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2887,1589,0.0009360241238027,Callithrix jacchus,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATATGTCCAAGCTAAA,P0008_1,231224,Princeton +CCATATTTCATGCTTT-P0008_1,Nonneuron,Vascular,VLMC,VLMC,Marmoset-696,Marmoset-696,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2832,1724,0.143810376524925,Callithrix jacchus,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCATATTTCATGCTTT,P0008_1,231224,Princeton +AGGTGAGGTTAAGTGT-P0008_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-913,Marmoset-913,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2819,1701,0.0003824045415967,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTGAGGTTAAGTGT,P0008_1,231224,Princeton +TTATCCTAGTTATTCC-P0008_1,Nonneuron,Immune,Microglia,Microglia,Marmoset-718,Marmoset-718,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2561,1480,0.0002423580590402,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTATCCTAGTTATTCC,P0008_1,231224,Princeton +GGTCGGTTCGACCTGA-P0008_1,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB FRMD7 GABA,Marmoset-245,Marmoset-245,CL:0000003,P0008_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231025,LPLCXR_231025_1,LPLCXR_231025_1_H6,477,16,2247,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_B2,398,7,79.9,BR_PXA_231120_1,SI-TT-H6_i7,SI-TT-H6_b(i5),SI-NA-B2,2015,1252,0.020996855571866,Callithrix jacchus,CS20250428_GROUP_0068,Interneuron,,OB|FRMD7|GABA,60,,,,,#cd0753,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTCGGTTCGACCTGA,P0008_1,231224,Princeton +GTTAACCAGTAGCGCC-P0008_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-316,Marmoset-316,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,31260,6948,0.0408288985490799,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTAACCAGTAGCGCC,P0008_2,231224,Princeton +GACTATTCAATTTAGC-P0008_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-994,Marmoset-994,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,21196,4966,0.358333379030228,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GACTATTCAATTTAGC,P0008_2,231224,Princeton +ATATGGTGTTCCATTA-P0008_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-136,Marmoset-136,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,18053,5189,0.0015876565594226,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATATGGTGTTCCATTA,P0008_2,231224,Princeton +CACCAACCACGGTTTA-P0008_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-306,Marmoset-306,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,18062,5257,0.0011730024125427,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACCAACCACGGTTTA,P0008_2,231224,Princeton +AGGACTAAGGCCTAAT-P0008_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Marmoset-782,Marmoset-782,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,17090,5228,0.398720532655716,Callithrix jacchus,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGACTAAGGCCTAAT,P0008_2,231224,Princeton +AAGCGTTTCCGCCTCA-P0008_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-68,Marmoset-68,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,16140,4500,0.0003742882399819,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCGTTTCCGCCTCA,P0008_2,231224,Princeton +GCGATATTCTAATCCT-P0008_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-322,Marmoset-322,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,14314,4594,0.0010675264056772,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGATATTCTAATCCT,P0008_2,231224,Princeton +CTCTGTTCAAATATCC-P0008_2,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-428,Marmoset-428,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,13241,4031,0.000479038717458,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCTGTTCAAATATCC,P0008_2,231224,Princeton +TCGTTAGCATGAGTTT-P0008_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-63,Marmoset-63,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,12215,3781,0.0003573365102056,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCGTTAGCATGAGTTT,P0008_2,231224,Princeton +TGATCACAGCTGGAAA-P0008_2,Nonneuron,Astro-Epen,Ependymal,Ependymal,Marmoset-663,Marmoset-663,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,10623,4526,0.255924373865128,Callithrix jacchus,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGATCACAGCTGGAAA,P0008_2,231224,Princeton +AGGTTTGGTCATCATC-P0008_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-520,Marmoset-520,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,8520,3626,0.0596317015588284,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGTTTGGTCATCATC,P0008_2,231224,Princeton +TACCAGGTCTTGTCCA-P0008_2,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-213,Marmoset-213,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,8308,3256,0.0003095875727012,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCAGGTCTTGTCCA,P0008_2,231224,Princeton +TACCGAAGTGATCATG-P0008_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-323,Marmoset-323,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,6929,2857,0.0007294087554328,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCGAAGTGATCATG,P0008_2,231224,Princeton +AGGTAACCAAATTGCT-P0008_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-916,Marmoset-916,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,6822,2923,0.0004781618481501,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTAACCAAATTGCT,P0008_2,231224,Princeton +GAGGGAGCATCCTGAA-P0008_2,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-142,Marmoset-142,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,6541,3230,0.0109762838110328,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGGGAGCATCCTGAA,P0008_2,231224,Princeton +TAACCTAAGTATTGCA-P0008_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-917,Marmoset-917,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,6477,3056,0.247392371296883,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAACCTAAGTATTGCA,P0008_2,231224,Princeton +TTGTTGTTCAAACACC-P0008_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-919,Marmoset-919,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,6385,2951,0.0004916873876936,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGTTGTTCAAACACC,P0008_2,231224,Princeton +TATGCATCAAGCTTAT-P0008_2,Subpallium GABA,Cx GABA,ACx MEIS2 GABA,OB Dopa-GABA,Marmoset-246,Marmoset-246,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,5606,2816,0.0004006072995252,Callithrix jacchus,CS20250428_GROUP_0067,Interneuron,,OB|Dopa|GABA,61,,,,,#902f6b,,CS20250428_SUBCL_0036,,ACx|MEIS2|GABA,35,#3636ed,,CS20250428_CLASS_0012,,Cx|GABA,11,#ebb3a7,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATGCATCAAGCTTAT,P0008_2,231224,Princeton +ATCCGTGAGGCAGGTG-P0008_2,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-433,Marmoset-433,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,4532,2314,0.0001821099576773,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCCGTGAGGCAGGTG,P0008_2,231224,Princeton +AGGAGCTAGCCTGACA-P0008_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-517,Marmoset-517,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,4253,2400,0.102754078805447,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGAGCTAGCCTGACA,P0008_2,231224,Princeton +TTAGGATGTTATAGCG-P0008_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-123,Marmoset-123,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,4296,2211,0.085480235517025,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAGGATGTTATAGCG,P0008_2,231224,Princeton +CGCATTACAGCATGTC-P0008_2,Nonneuron,OPC-Oligo,Oligodendrocyte,Oligo OPALIN,Marmoset-5,Marmoset-5,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,3147,1521,0.0022296728566288,Callithrix jacchus,CS20250428_GROUP_0025,Nonneuron,CL:0000128,Oligo|OPALIN,9,Siletti et al. 2023,,,,#488edc,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGCATTACAGCATGTC,P0008_2,231224,Princeton +AATTGCCAGAGGAGGA-P0008_2,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-732,Marmoset-732,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,3170,2073,0.0013850952964276,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGCCAGAGGAGGA,P0008_2,231224,Princeton +TAGTGGCGTTAATGAC-P0008_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-298,Marmoset-298,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,3047,1820,0.0006118118762969,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGTGGCGTTAATGAC,P0008_2,231224,Princeton +AGAGATTAGTTGGATC-P0008_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-326,Marmoset-326,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,2958,1810,0.0002326837275177,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGAGATTAGTTGGATC,P0008_2,231224,Princeton +CCTTGCGTCATGCAAC-P0008_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-518,Marmoset-518,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,2799,1721,0.0005070746410638,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCTTGCGTCATGCAAC,P0008_2,231224,Princeton +TCTGTGACAGGAACTG-P0008_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-672,Marmoset-672,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,2515,1506,0.0001966590934898,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCTGTGACAGGAACTG,P0008_2,231224,Princeton +GAGAAACGTCAATGTG-P0008_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-523,Marmoset-523,CL:0000003,P0008_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231024,LPLCXR_231024_1,LPLCXR_231024_1_G6,416,16,1718.5,BR_PXR_231108_1,231030,LPLCXA_231030_1,LPLCXA_231030_1_C2,390,7,164.16,BR_PXA_231120_1,SI-TT-G6_i7,SI-TT-G6_b(i5),SI-NA-C2,2257,1474,1.7805377865443e-05,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGAAACGTCAATGTG,P0008_2,231224,Princeton +CTATGACAGTCTATGA-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-921,Marmoset-921,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,85470,9179,0.330353617668152,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTATGACAGTCTATGA,P0009_1,231224,Princeton +TATATCCTCGCCTGTT-P0009_1,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-828,Marmoset-828,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,49845,8430,0.455900341272354,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TATATCCTCGCCTGTT,P0009_1,231224,Princeton +GAAGGATGTACTTAGG-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-923,Marmoset-923,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,48912,6726,0.0007383923511952,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAAGGATGTACTTAGG,P0009_1,231224,Princeton +CCCAGCACATGATTGT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-927,Marmoset-927,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,47172,6909,0.0018808766035363,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCAGCACATGATTGT,P0009_1,231224,Princeton +ACAGCCGGTGTTGCAA-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-931,Marmoset-931,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,44190,6957,0.0004596398794092,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAGCCGGTGTTGCAA,P0009_1,231224,Princeton +AGTCAATGTCCTTAGT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-328,Marmoset-328,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,42940,6443,0.0007389212842099,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTCAATGTCCTTAGT,P0009_1,231224,Princeton +GATCGATTCTAAGGAG-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-933,Marmoset-933,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,39034,6734,0.0007354035624302,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATCGATTCTAAGGAG,P0009_1,231224,Princeton +ACCAGGCTCACTAATG-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-932,Marmoset-932,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,36797,6222,0.0010923362569883,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAGGCTCACTAATG,P0009_1,231224,Princeton +TTTAACCTCCCTGATC-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-934,Marmoset-934,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,34438,6500,0.0005733100115321,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTAACCTCCCTGATC,P0009_1,231224,Princeton +TCCATTGTCCCTGACT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-337,Marmoset-337,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,32293,6467,0.0021760063245892,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCATTGTCCCTGACT,P0009_1,231224,Princeton +TCATTGTTCTAACCTT-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-64,Marmoset-64,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,31196,4693,0.0020083943381905,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATTGTTCTAACCTT,P0009_1,231224,Princeton +CATCAGCCAAGGAATC-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-225,Marmoset-225,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,30980,5564,0.0024655200541019,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATCAGCCAAGGAATC,P0009_1,231224,Princeton +TCATGTTTCCTCATCA-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-325,Marmoset-325,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,30972,6077,0.0016180506208911,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATGTTTCCTCATCA,P0009_1,231224,Princeton +CCAGCTAAGTCATCCC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-339,Marmoset-339,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,30177,5628,0.0007966141565702,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCAGCTAAGTCATCCC,P0009_1,231224,Princeton +GATTATGTCACAGGAA-P0009_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-130,Marmoset-130,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,30062,6371,0.425967812538147,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATTATGTCACAGGAA,P0009_1,231224,Princeton +GAGTAACCACGTAATT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-935,Marmoset-935,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,29278,5588,0.315630048513412,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGTAACCACGTAATT,P0009_1,231224,Princeton +TTTGCGACAGTTGCGT-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-996,Marmoset-996,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,29022,5748,0.0014446292771026,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGCGACAGTTGCGT,P0009_1,231224,Princeton +AATTGCCAGGCAAGTA-P0009_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-361,Marmoset-361,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,28569,5519,0.0023796230088919,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATTGCCAGGCAAGTA,P0009_1,231224,Princeton +TCATTGTTCCCGTTAC-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-937,Marmoset-937,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,27942,5514,0.0004599828389473,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATTGTTCCCGTTAC,P0009_1,231224,Princeton +GATAACGAGTTCCCGT-P0009_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-149,Marmoset-149,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,27851,6057,0.609240174293518,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATAACGAGTTCCCGT,P0009_1,231224,Princeton +CAAACCGTCTACCTAT-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-226,Marmoset-226,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,27569,5800,0.00084980414249,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAAACCGTCTACCTAT,P0009_1,231224,Princeton +TAAGGCTTCAATGAGG-P0009_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-128,Marmoset-128,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,27179,5735,0.538556396961212,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAAGGCTTCAATGAGG,P0009_1,231224,Princeton +TTAAGGACAAACTCAT-P0009_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-362,Marmoset-362,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,26616,6093,0.231120571494102,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAAGGACAAACTCAT,P0009_1,231224,Princeton +CCTCCTGAGAACAAGT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-321,Marmoset-321,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,26589,5546,0.00082825392019,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTCCTGAGAACAAGT,P0009_1,231224,Princeton +CCGTGCTGTCTTACTA-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-230,Marmoset-230,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,25680,5384,0.0007437262684106,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGTGCTGTCTTACTA,P0009_1,231224,Princeton +TCCATTGTCCCTGATC-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-74,Marmoset-74,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,25618,5792,0.288069158792496,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCATTGTCCCTGATC,P0009_1,231224,Princeton +GACACTAGTTTACTTG-P0009_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-144,Marmoset-144,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,24949,5951,0.0017146619502455,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GACACTAGTTTACTTG,P0009_1,231224,Princeton +AAGAACAGTTTGCGAA-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-998,Marmoset-998,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,24843,5579,0.437999427318573,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGAACAGTTTGCGAA,P0009_1,231224,Princeton +GAGAACCAGCCTCTCG-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-220,Marmoset-220,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,24750,5211,0.0009677674970589,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGAACCAGCCTCTCG,P0009_1,231224,Princeton +AGCTGCTCAATATGGA-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-997,Marmoset-997,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,24330,5317,0.0014446292771026,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTGCTCAATATGGA,P0009_1,231224,Princeton +TATAGCTCAAATTCGT-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-231,Marmoset-231,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,24028,4241,0.0022626465652138,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATAGCTCAAATTCGT,P0009_1,231224,Princeton +GCAAGCCTCCTTAATC-P0009_1,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-430,Marmoset-430,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,23996,5501,0.0013009116519242,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAAGCCTCCTTAATC,P0009_1,231224,Princeton +GGTTGCGGTAATAACC-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1003,Marmoset-1003,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,23427,5709,0.0642576217651367,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTGCGGTAATAACC,P0009_1,231224,Princeton +TTGCACACATTGACAT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-938,Marmoset-938,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,23114,5474,0.0009984447387978,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCACACATTGACAT,P0009_1,231224,Princeton +GATGACTTCGAGCAAA-P0009_1,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Marmoset-1220,Marmoset-1220,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,23058,5236,0.552305102348328,Callithrix jacchus,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATGACTTCGAGCAAA,P0009_1,231224,Princeton +TAAGTGCTCGGCTATG-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-221,Marmoset-221,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22858,5414,0.539615035057068,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAAGTGCTCGGCTATG,P0009_1,231224,Princeton +TAAAGCCTCCTAGTTT-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-227,Marmoset-227,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22779,5124,0.0007437262684106,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAAAGCCTCCTAGTTT,P0009_1,231224,Princeton +TACCAAATCCTTCGTA-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-232,Marmoset-232,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22771,5155,0.0023527829907834,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCAAATCCTTCGTA,P0009_1,231224,Princeton +TAACCGGTCTTGATGA-P0009_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-132,Marmoset-132,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22485,5519,0.0013151817256584,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAACCGGTCTTGATGA,P0009_1,231224,Princeton +GTTGTTGCAACCGCCA-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-329,Marmoset-329,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22459,5263,0.002486269455403,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTGTTGCAACCGCCA,P0009_1,231224,Princeton +ACAAAGGTCCTAATAG-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-341,Marmoset-341,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22260,5206,0.0007966141565702,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACAAAGGTCCTAATAG,P0009_1,231224,Princeton +CTTCAATTCATCCTGC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-335,Marmoset-335,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22244,5325,0.0011892414186149,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTCAATTCATCCTGC,P0009_1,231224,Princeton +CGATTGAGTCAAAGAA-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-301,Marmoset-301,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22212,5191,0.0011892414186149,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGATTGAGTCAAAGAA,P0009_1,231224,Princeton +GGAACGGTCCGTCCAT-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-999,Marmoset-999,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,22097,5761,0.0007734637474641,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGAACGGTCCGTCCAT,P0009_1,231224,Princeton +TCATTTGGTTGGTTCT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-308,Marmoset-308,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,21859,5137,0.0007159829838201,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATTTGGTTGGTTCT,P0009_1,231224,Princeton +TCTTGTCCACAAACTT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-936,Marmoset-936,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,21774,5616,0.0008725109510123,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTTGTCCACAAACTT,P0009_1,231224,Princeton +AGAACAAGTGGACATC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-327,Marmoset-327,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,21682,5405,0.001584815676324,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGAACAAGTGGACATC,P0009_1,231224,Princeton +CCACAGGGTGTTGCTT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-925,Marmoset-925,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,21516,5205,0.0008716027368791,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCACAGGGTGTTGCTT,P0009_1,231224,Princeton +AGCTTCCTCTAGCGAT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-312,Marmoset-312,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,20115,4827,0.0009393221116624,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCTTCCTCTAGCGAT,P0009_1,231224,Princeton +GGCGGTTTCCTACCTA-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1006,Marmoset-1006,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,20096,5348,0.0645544901490211,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCGGTTTCCTACCTA,P0009_1,231224,Princeton +CTTGTTTAGACTTACA-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-318,Marmoset-318,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,19180,4665,0.0007966141565702,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTGTTTAGACTTACA,P0009_1,231224,Princeton +GGCGCTAGTCACGGAT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-926,Marmoset-926,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,18944,4879,0.000950354617089,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCGCTAGTCACGGAT,P0009_1,231224,Princeton +TCGCGAGGTCCTTTAA-P0009_1,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-429,Marmoset-429,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,18388,4902,0.301682889461517,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCGCGAGGTCCTTTAA,P0009_1,231224,Princeton +TAAGTGCTCAAGGACA-P0009_1,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-108,Marmoset-108,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,18214,5152,0.51747739315033,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAAGTGCTCAAGGACA,P0009_1,231224,Princeton +GTCAAACTCCTTGCGT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-311,Marmoset-311,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,18043,4676,0.0011892414186149,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCAAACTCCTTGCGT,P0009_1,231224,Princeton +CAAAGTGAGCCTCTCG-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-941,Marmoset-941,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,17864,4807,0.0008225333294831,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAAAGTGAGCCTCTCG,P0009_1,231224,Princeton +ATGGCCCAGACTTACA-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-228,Marmoset-228,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,17295,4416,0.00084980414249,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGGCCCAGACTTACA,P0009_1,231224,Princeton +AGCCTCCGTTCGCTTG-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-319,Marmoset-319,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,16512,4549,0.220246762037277,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCCTCCGTTCGCTTG,P0009_1,231224,Princeton +TGTTTGTTCATAACTG-P0009_1,Nonneuron,Vascular,VLMC,VLMC,Marmoset-700,Marmoset-700,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,16517,5399,0.0008906271541491,Callithrix jacchus,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGTTTGTTCATAACTG,P0009_1,231224,Princeton +CATCCTCAGGTGCTGC-P0009_1,Nonneuron,Astro-Epen,Ependymal,Ependymal,Marmoset-666,Marmoset-666,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,16339,5336,0.619376063346863,Callithrix jacchus,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATCCTCAGGTGCTGC,P0009_1,231224,Princeton +CATAATCCATTTAAGC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-336,Marmoset-336,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,16270,4415,0.0005040886462666,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATAATCCATTTAAGC,P0009_1,231224,Princeton +GCAAACAAGACACCGC-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-942,Marmoset-942,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,16046,4930,0.0003573066787794,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAAACAAGACACCGC,P0009_1,231224,Princeton +GCGCTTGCAGTTTGGC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-340,Marmoset-340,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,15550,4666,0.438246876001358,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGCTTGCAGTTTGGC,P0009_1,231224,Princeton +TTTGTCTAGTTTCCGC-P0009_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-733,Marmoset-733,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,14260,4174,0.0979524329304695,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGTCTAGTTTCCGC,P0009_1,231224,Princeton +AGCATCCCACCGTTCC-P0009_1,Nonneuron,Vascular,Pericyte,Pericyte,Marmoset-112,Marmoset-112,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,13307,4338,0.492025405168533,Callithrix jacchus,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGCATCCCACCGTTCC,P0009_1,231224,Princeton +CGATTATCAAGTGTTT-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-307,Marmoset-307,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,13301,3896,0.0004485827812459,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGATTATCAAGTGTTT,P0009_1,231224,Princeton +TATGAAGCACATACTG-P0009_1,Nonneuron,Vascular,Endo,Endo,Marmoset-694,Marmoset-694,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,12875,4296,0.584480047225952,Callithrix jacchus,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TATGAAGCACATACTG,P0009_1,231224,Princeton +TAAGTGCTCCAATTAG-P0009_1,Nonneuron,OPC-Oligo,COP,COP,Marmoset-238,Marmoset-238,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,12700,3560,0.583556771278381,Callithrix jacchus,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAAGTGCTCCAATTAG,P0009_1,231224,Princeton +ACCCGCTGTTAACGGC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-320,Marmoset-320,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,12000,3845,0.0007181057007983,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCGCTGTTAACGGC,P0009_1,231224,Princeton +TTGCGAGTCCCTGGTT-P0009_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-233,Marmoset-233,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,11595,3702,0.0014446292771026,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCGAGTCCCTGGTT,P0009_1,231224,Princeton +CCTAAATCAATCCCTT-P0009_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-516,Marmoset-516,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,10819,3582,0.0011765917297452,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCTAAATCAATCCCTT,P0009_1,231224,Princeton +TGGACGGAGGAGGACT-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-944,Marmoset-944,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,10700,3720,0.000232656209846,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGACGGAGGAGGACT,P0009_1,231224,Princeton +TGTCAGTAGCAACATC-P0009_1,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-111,Marmoset-111,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,8710,3527,0.517675757408142,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGTCAGTAGCAACATC,P0009_1,231224,Princeton +AATCCATCAGTTAGCC-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-947,Marmoset-947,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,7196,3007,0.0007030150736682,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATCCATCAGTTAGCC,P0009_1,231224,Princeton +AGGCTAGCAAACCCTA-P0009_1,Nonneuron,Vascular,Endo,Endo,Marmoset-690,Marmoset-690,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,7131,2943,0.570626616477966,Callithrix jacchus,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,AGGCTAGCAAACCCTA,P0009_1,231224,Princeton +ACCAAACTCATGGTTA-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1025,Marmoset-1025,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,6837,2882,0.0015736619243398,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAAACTCATGGTTA,P0009_1,231224,Princeton +AGTCCTTGTGTTAAAC-P0009_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-324,Marmoset-324,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,6173,2409,0.0004810186219401,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTCCTTGTGTTAAAC,P0009_1,231224,Princeton +ATCCAACAGCACTAAC-P0009_1,Nonneuron,Vascular,Endo,Endo,Marmoset-113,Marmoset-113,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,5750,2704,0.0012589241378009,Callithrix jacchus,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATCCAACAGCACTAAC,P0009_1,231224,Princeton +TTCCTTGAGTAGCGGG-P0009_1,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-734,Marmoset-734,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,5589,2594,0.0003209634451195,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTCCTTGAGTAGCGGG,P0009_1,231224,Princeton +GTGCACGGTTAGGATT-P0009_1,Nonneuron,Immune,Microglia,Microglia,Marmoset-715,Marmoset-715,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,5436,2363,0.0006312840851023,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTGCACGGTTAGGATT,P0009_1,231224,Princeton +ATCGCTTGTAGTTAAC-P0009_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-363,Marmoset-363,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,5300,2399,0.0011287964880466,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCGCTTGTAGTTAAC,P0009_1,231224,Princeton +TCGTTAGCATAAACCT-P0009_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-359,Marmoset-359,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,4647,2262,0.0005237634759396,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCGTTAGCATAAACCT,P0009_1,231224,Princeton +TCGACAAGTAATCGGC-P0009_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1002,Marmoset-1002,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,3398,1977,0.0641510486602783,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCGACAAGTAATCGGC,P0009_1,231224,Princeton +TACAGCTAGCAGGCCT-P0009_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-524,Marmoset-524,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,3380,1587,0.0007362229516729,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACAGCTAGCAGGCCT,P0009_1,231224,Princeton +GTTGGCGGTCGTTACT-P0009_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-364,Marmoset-364,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,3364,2071,0.236922428011894,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTGGCGGTCGTTACT,P0009_1,231224,Princeton +TAACAAGCAGGTTAAA-P0009_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-949,Marmoset-949,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,3344,1976,0.0001968416327144,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAACAAGCAGGTTAAA,P0009_1,231224,Princeton +GTTCTTAGTCCTTTAA-P0009_1,Nonneuron,Vascular,VLMC,VLMC,Marmoset-703,Marmoset-703,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,3212,1787,0.0091711692512035,Callithrix jacchus,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTCTTAGTCCTTTAA,P0009_1,231224,Princeton +TCTTGTCCATTAGCCA-P0009_1,Nonneuron,Immune,Microglia,Microglia,Marmoset-716,Marmoset-716,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,3174,1596,0.0007662347052246,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCTTGTCCATTAGCCA,P0009_1,231224,Princeton +TGATCCTGTAGCAGCT-P0009_1,Nonneuron,Vascular,Pericyte,Pericyte,Marmoset-704,Marmoset-704,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2882,1491,0.000878844759427,Callithrix jacchus,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGATCCTGTAGCAGCT,P0009_1,231224,Princeton +CGAGGAAGTGTGTGGT-P0009_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-129,Marmoset-129,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2842,1774,0.0015027555637061,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAGGAAGTGTGTGGT,P0009_1,231224,Princeton +TAGCCTCTCGATTTAG-P0009_1,Nonneuron,Vascular,Endo,Endo,Marmoset-705,Marmoset-705,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2764,1608,0.0005458806408569,Callithrix jacchus,CS20250428_GROUP_0011,Nonneuron,CL:0000115,Endo,14,Yao et al. 2023,,,PECAM1,#361d61,,CS20250428_SUBCL_0011,CL:0000115,Endo,10,#f6390c,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TAGCCTCTCGATTTAG,P0009_1,231224,Princeton +CCACAATAGCGAAGTA-P0009_1,Subpallium GABA,CN CGE GABA,CN LAMP5-CXCL14 GABA,LAMP5-CXCL14 GABA,Marmoset-432,Marmoset-432,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2572,1600,0.0004174028872512,Callithrix jacchus,CS20250428_GROUP_0004,Interneuron,,LAMP5|CXCL14|GABA,36,,LAMP5,,"LAMP5, CXCL14",#f6b5d1,,CS20250428_SUBCL_0002,,CN|LAMP5|CXCL14|GABA,23,#e5b672,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCACAATAGCGAAGTA,P0009_1,231224,Princeton +ATGTTGTCAAGGCCAA-P0009_1,Nonneuron,Vascular,SMC,SMC,Marmoset-706,Marmoset-706,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2322,1423,0.0007996468921191,Callithrix jacchus,CS20250428_GROUP_0028,Nonneuron,CL:0000192,SMC,16,Yao et al. 2023,,,ACTA2,#177242,,CS20250428_SUBCL_0024,CL:0000192,SMC,12,#ab0c8d,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATGTTGTCAAGGCCAA,P0009_1,231224,Princeton +TGCTCAACACTGACTA-P0009_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-525,Marmoset-525,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2321,1397,0.0006520317983813,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGCTCAACACTGACTA,P0009_1,231224,Princeton +GAGGTGAGTCGACTCC-P0009_1,Nonneuron,Vascular,VLMC,VLMC,Marmoset-114,Marmoset-114,CL:0000003,P0009_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_A7,474,14,1648.5,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_D1,453,7,257.32,BR_PXA_231120_1,SI-TT-A7_i7,SI-TT-A7_b(i5),SI-NA-D1,2259,1517,0.0008530578925274,Callithrix jacchus,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GAGGTGAGTCGACTCC,P0009_1,231224,Princeton +ACGTACCCACCTAATG-P0009_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-945,Marmoset-945,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,83623,9293,0.173656016588211,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGTACCCACCTAATG,P0009_2,231224,Princeton +GTTTACCGTGAATCGC-P0009_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-1222,Marmoset-1222,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,38231,6147,0.0006389666814357,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTTACCGTGAATCGC,P0009_2,231224,Princeton +TTGCAACAGTTAGCTA-P0009_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-950,Marmoset-950,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,36451,5982,0.0012717145727947,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCAACAGTTAGCTA,P0009_2,231224,Princeton +ATCCGTGAGCATTTCT-P0009_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-97,Marmoset-97,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,34781,6974,0.345099151134491,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATCCGTGAGCATTTCT,P0009_2,231224,Princeton +CTAATCGCAATATACC-P0009_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-928,Marmoset-928,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,29236,6063,0.0002691645931918,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAATCGCAATATACC,P0009_2,231224,Princeton +ACCTCACTCCATTACT-P0009_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-780,Marmoset-780,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,26334,5936,0.000482641509734,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTCACTCCATTACT,P0009_2,231224,Princeton +TTTCACCCATGAGTTT-P0009_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-92,Marmoset-92,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,24192,5693,0.161537796258926,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTCACCCATGAGTTT,P0009_2,231224,Princeton +AGCTTTAAGCCTTAAA-P0009_2,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-825,Marmoset-825,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,22492,5650,0.0005952476058155,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGCTTTAAGCCTTAAA,P0009_2,231224,Princeton +ACATCATCAGTTTCTC-P0009_2,Nonneuron,Immune,Microglia,Microglia,Marmoset-717,Marmoset-717,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,22152,5292,0.0015240547945722,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACATCATCAGTTTCTC,P0009_2,231224,Princeton +TCCATGCTCCTACCTA-P0009_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-303,Marmoset-303,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,19459,5147,0.0001154997371486,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCATGCTCCTACCTA,P0009_2,231224,Princeton +CAGGTTAGTACAAAGA-P0009_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1008,Marmoset-1008,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,18247,4870,0.0001841111516114,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAGGTTAGTACAAAGA,P0009_2,231224,Princeton +GAGGTAGGTCAAGACC-P0009_2,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-366,Marmoset-366,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,16169,4657,7.85162483225577e-05,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGGTAGGTCAAGACC,P0009_2,231224,Princeton +AAGTGTTGTAGACAAA-P0009_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-62,Marmoset-62,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,14920,4511,0.0628886595368385,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTGTTGTAGACAAA,P0009_2,231224,Princeton +CTTAGTTTCGCAGGCT-P0009_2,Nonneuron,Vascular,Pericyte,Pericyte,Marmoset-688,Marmoset-688,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,4983,2409,0.0008983817533589,Callithrix jacchus,CS20250428_GROUP_0027,Nonneuron,CL:0000669,Pericyte,15,Yao et al. 2023,,,PDGFRB,#5713c3,,CS20250428_SUBCL_0023,CL:0000669,Pericyte,11,#51cd80,,CS20250428_CLASS_0011,CL:0002320,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTTAGTTTCGCAGGCT,P0009_2,231224,Princeton +ACCAGCTCATCACTTC-P0009_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-522,Marmoset-522,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,4813,2421,0.599031031131744,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACCAGCTCATCACTTC,P0009_2,231224,Princeton +GATGGACAGGAGTCTT-P0009_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-952,Marmoset-952,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,2894,1390,0.0008529688930138,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATGGACAGGAGTCTT,P0009_2,231224,Princeton +CGTTAGGTCAAGGACA-P0009_2,Nonneuron,Immune,Macrophage,BAM,Marmoset-992,Marmoset-992,CL:0000003,P0009_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_B7,480,14,1302,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_E1,435,7,337.0,BR_PXA_231120_1,SI-TT-B7_i7,SI-TT-B7_b(i5),SI-NA-E1,2195,1462,0.0005148680065758,Callithrix jacchus,CS20250428_GROUP_0001,Nonneuron,CL:4042003,BAM,5,Yao et al. 2023,BAM,Border-associated macrophages,"CD163, MRC1",#195f8d,,CS20250428_SUBCL_0018,CL:0000235,Macrophage,4,#566c21,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CGTTAGGTCAAGGACA,P0009_2,231224,Princeton +CCGCTAGCACAAAGCG-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-137,Marmoset-137,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,77511,9015,0.647716760635376,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGCTAGCACAAAGCG,P0010_2,231224,Princeton +CACTTTGTCCTAGTTT-P0010_2,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Marmoset-721,Marmoset-721,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,76060,8827,0.0005774733144789,Callithrix jacchus,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACTTTGTCCTAGTTT,P0010_2,231224,Princeton +GTTTCCTCACATACTG-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1234,Marmoset-1234,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,61540,9148,0.543958187103271,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTTCCTCACATACTG,P0010_2,231224,Princeton +TATGTGATCCATTACT-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1019,Marmoset-1019,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,56349,7673,0.638423204421997,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATGTGATCCATTACT,P0010_2,231224,Princeton +TTGCAATCATCACTTC-P0010_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-784,Marmoset-784,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,55942,7561,0.0087339375168085,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCAATCATCACTTC,P0010_2,231224,Princeton +TAGCCTCTCCAAGTTA-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1024,Marmoset-1024,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,53083,8724,0.635716080665588,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCCTCTCCAAGTTA,P0010_2,231224,Princeton +CCACACAAGGACTTAC-P0010_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-785,Marmoset-785,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,52838,7846,0.219593301415443,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCACACAAGGACTTAC,P0010_2,231224,Princeton +GCAGGCTTCATGCTTT-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1236,Marmoset-1236,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,50300,8624,0.495533019304276,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAGGCTTCATGCTTT,P0010_2,231224,Princeton +GATTAGCTCCTGGCTT-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1012,Marmoset-1012,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,48640,7892,0.660585224628448,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GATTAGCTCCTGGCTT,P0010_2,231224,Princeton +CGGCTAATCAGGCCTA-P0010_2,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Marmoset-1221,Marmoset-1221,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,47919,7923,0.729899525642395,Callithrix jacchus,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGCTAATCAGGCCTA,P0010_2,231224,Princeton +GTCATGCCAACTAGCC-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1007,Marmoset-1007,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,47818,8458,0.810666143894196,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCATGCCAACTAGCC,P0010_2,231224,Princeton +GGTGAGCCAATCGCAC-P0010_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-330,Marmoset-330,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,43700,6699,0.001058135414496,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTGAGCCAATCGCAC,P0010_2,231224,Princeton +AGCCTAGTCAATTGGC-P0010_2,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,GPin-BF Cholinergic GABA,Marmoset-722,Marmoset-722,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,43693,8189,0.610228180885315,Callithrix jacchus,CS20250428_GROUP_0003,Interneuron,,GPin|BF|Cholinergic|GABA,35,,,,,#fde020,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCCTAGTCAATTGGC,P0010_2,231224,Princeton +CTAACCACAATAACGA-P0010_2,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Marmoset-723,Marmoset-723,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,42628,7602,0.000447635538876,Callithrix jacchus,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAACCACAATAACGA,P0010_2,231224,Princeton +TTTCCACCAATTAACC-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-126,Marmoset-126,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,41383,6893,0.093949094414711,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTCCACCAATTAACC,P0010_2,231224,Princeton +TAGGCTGTCGCTTCTA-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-124,Marmoset-124,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,40266,7738,0.713714480400085,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGCTGTCGCTTCTA,P0010_2,231224,Princeton +GGGTTATTCCCTGTTA-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1238,Marmoset-1238,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,40189,7595,0.0008111842907965,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGTTATTCCCTGTTA,P0010_2,231224,Princeton +TATGACTCAAACCTAT-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1235,Marmoset-1235,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,38763,7519,0.288443684577942,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATGACTCAAACCTAT,P0010_2,231224,Princeton +CGCACACAGAATGACG-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1239,Marmoset-1239,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,38622,7741,0.504903852939606,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCACACAGAATGACG,P0010_2,231224,Princeton +TGGGCCTAGGGTTATC-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1240,Marmoset-1240,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,37071,7093,0.630640745162964,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGGCCTAGGGTTATC,P0010_2,231224,Princeton +CATTCCTCACCAGCAT-P0010_2,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-826,Marmoset-826,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,36815,7170,0.547901034355164,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CATTCCTCACCAGCAT,P0010_2,231224,Princeton +ACATTAGTCATCCTAT-P0010_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-779,Marmoset-779,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,36774,7287,0.0087497672066092,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACATTAGTCATCCTAT,P0010_2,231224,Princeton +CCCTCAGTCCTAAGTA-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-138,Marmoset-138,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,36662,7207,0.003285166574642,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTCAGTCCTAAGTA,P0010_2,231224,Princeton +ACGTACCCAGCAACAG-P0010_2,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-827,Marmoset-827,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,34332,7276,0.110058076679707,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACGTACCCAGCAACAG,P0010_2,231224,Princeton +TTAGGAACACCCACCT-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1241,Marmoset-1241,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,32554,7018,0.0029998186510056,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAGGAACACCCACCT,P0010_2,231224,Princeton +AGCCTGGGTCACCTAT-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1022,Marmoset-1022,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,31098,6543,0.014272109605372,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCCTGGGTCACCTAT,P0010_2,231224,Princeton +ACCTTCCAGTCATTTC-P0010_2,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-222,Marmoset-222,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,30777,6462,0.0744609162211418,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTCCAGTCATTTC,P0010_2,231224,Princeton +CCTCCTCTCGGTCATG-P0010_2,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Marmoset-541,Marmoset-541,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,30763,6528,0.76861959695816,Callithrix jacchus,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTCCTCTCGGTCATG,P0010_2,231224,Princeton +TTTCCACCACAGAAAC-P0010_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-781,Marmoset-781,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,30296,6427,0.000171445790329,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTCCACCACAGAAAC,P0010_2,231224,Princeton +CTTTGAGCAAAGCGGC-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-76,Marmoset-76,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,30187,6898,0.673060536384583,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTTGAGCAAAGCGGC,P0010_2,231224,Princeton +GAACACAAGGCGAATA-P0010_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-786,Marmoset-786,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,29878,6510,0.0048705385997891,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAACACAAGGCGAATA,P0010_2,231224,Princeton +TGATCACAGTAAGAAC-P0010_2,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Marmoset-724,Marmoset-724,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,29303,6462,0.0003732799668796,Callithrix jacchus,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGATCACAGTAAGAAC,P0010_2,231224,Princeton +ACGAACAAGGTCTTGG-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-127,Marmoset-127,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,29125,5730,0.0005090580089017,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGAACAAGGTCTTGG,P0010_2,231224,Princeton +ACCTTGTGTCCGGTTC-P0010_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-951,Marmoset-951,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,28373,6203,0.294148504734039,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTGTGTCCGGTTC,P0010_2,231224,Princeton +TTTAACGAGCCAAATC-P0010_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-915,Marmoset-915,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,26874,6313,0.0464117825031281,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTAACGAGCCAAATC,P0010_2,231224,Princeton +ATCAGGTTCGTAACGT-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 StrioMat Hybrid MSN,Marmoset-241,Marmoset-241,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,26732,5967,0.0164654497057199,Callithrix jacchus,CS20250428_GROUP_0053,LGE,,STRd|D2 StrioMat Hybrid MSN,56,Novel,,,,#9268ac,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCAGGTTCGTAACGT,P0010_2,231224,Princeton +TAGGAACCACGTAATT-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1004,Marmoset-1004,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,26347,5859,0.0005065751029178,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGAACCACGTAATT,P0010_2,231224,Princeton +CGTTTCTCAATCTCTC-P0010_2,Subpallium GABA,CN MGE GABA,STR SST-CHODL GABA,STR SST-CHODL GABA,Marmoset-731,Marmoset-731,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,26280,6259,0.0038210460916161,Callithrix jacchus,CS20250428_GROUP_0043,Interneuron,Need to create a PR,STR|SST|CHODL|GABA,29,Krienen et al. 2020,Sst Chodl | LTS,,NPY,#708297,,CS20250428_SUBCL_0033,,STR|SST|CHODL|GABA,19,#eea495,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTTTCTCAATCTCTC,P0010_2,231224,Princeton +GGCGCTAGTCTTTGAC-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1242,Marmoset-1242,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,25355,5887,0.0003142485511489,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCGCTAGTCTTTGAC,P0010_2,231224,Princeton +ACCTACCTCTTAATGG-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1023,Marmoset-1023,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,24446,6135,0.0204938184469938,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTACCTCTTAATGG,P0010_2,231224,Princeton +AGGTTAACAGTTTACG-P0010_2,Subpallium GABA,F M GABA,F GABA,AMY-SLEA-BNST GABA,Marmoset-1243,Marmoset-1243,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,22520,6025,0.0883497223258018,Callithrix jacchus,CS20250428_GROUP_0066,Interneuron,,AMY|SLEA|BNST|GABA,48,,,,,#b69e14,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTTAACAGTTTACG,P0010_2,231224,Princeton +TCATAACCAGTAAGTA-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-93,Marmoset-93,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,21320,5583,0.001254761707969,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATAACCAGTAAGTA,P0010_2,231224,Princeton +CCCTGGACAGGACACA-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1009,Marmoset-1009,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,20635,5477,0.0547860004007816,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTGGACAGGACACA,P0010_2,231224,Princeton +AAGCTTGGTGATCATG-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1000,Marmoset-1000,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,20575,5632,0.0003518596640788,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGCTTGGTGATCATG,P0010_2,231224,Princeton +GCCCATAAGACAGGTA-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-77,Marmoset-77,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,20381,5355,0.0004932320443913,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCCATAAGACAGGTA,P0010_2,231224,Princeton +CAACAATGTTCACCAT-P0010_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-789,Marmoset-789,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,20485,5853,0.0003535698633641,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAACAATGTTCACCAT,P0010_2,231224,Princeton +AGCCGCTAGTAAGTGG-P0010_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-939,Marmoset-939,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,19595,5428,0.0004240720591042,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGCCGCTAGTAAGTGG,P0010_2,231224,Princeton +TGCTCCGTCTTTGTAC-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-125,Marmoset-125,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,19375,5340,0.0004570703604258,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGCTCCGTCTTTGTAC,P0010_2,231224,Princeton +TGGACGGAGTATGTGC-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1010,Marmoset-1010,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,19284,5418,0.050599280744791,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGACGGAGTATGTGC,P0010_2,231224,Princeton +CTGCTCCCAGCCAGTT-P0010_2,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-829,Marmoset-829,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,18578,5294,0.0007202526321634,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTGCTCCCAGCCAGTT,P0010_2,231224,Princeton +ATGAAGTAGGACAATG-P0010_2,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Marmoset-542,Marmoset-542,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,17701,5070,0.0005767192342318,Callithrix jacchus,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGAAGTAGGACAATG,P0010_2,231224,Princeton +ACCCAGGGTGGAGCAA-P0010_2,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-830,Marmoset-830,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,17105,5422,0.0005657686269842,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACCCAGGGTGGAGCAA,P0010_2,231224,Princeton +TAGCGGACATGAAGTA-P0010_2,Subpallium GABA,CN MGE GABA,CN Cholinergic GABA,STR Cholinergic GABA,Marmoset-725,Marmoset-725,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,16739,5442,0.0004676917160395,Callithrix jacchus,CS20250428_GROUP_0055,Interneuron,,STR|Cholinergic|GABA,34,,,,,#8f5ff5,,CS20250428_SUBCL_0001,,CN|Cholinergic|GABA,22,#b1f081,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCGGACATGAAGTA,P0010_2,231224,Princeton +GCAATCTAGAAACTGG-P0010_2,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-154,Marmoset-154,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,16743,4823,0.0220989603549242,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAATCTAGAAACTGG,P0010_2,231224,Princeton +CGCTTCTAGCGGGCAA-P0010_2,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STRv D1 NUDAP MSN,Marmoset-214,Marmoset-214,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,15611,4618,0.0075197108089923,Callithrix jacchus,CS20250428_GROUP_0057,LGE,CL:4030054,STRv|D1 NUDAP MSN,57,He et al. 2021,D1-NUDAP,,GRIA4,#e377c2,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCTTCTAGCGGGCAA,P0010_2,231224,Princeton +CTAATCCGTGCATTAG-P0010_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-313,Marmoset-313,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,14348,4775,0.0010572945466265,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAATCCGTGCATTAG,P0010_2,231224,Princeton +GTTCCTGGTGTTAAAC-P0010_2,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR-BF TAC3-PLPP4-LHX8 GABA,Marmoset-283,Marmoset-283,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,13303,4640,0.0004303295281715,Callithrix jacchus,CS20250428_GROUP_0046,Interneuron,,STR|BF|TAC3|PLPP4|LHX8|GABA,26,,,,,#9d3b4f,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTCCTGGTGTTAAAC,P0010_2,231224,Princeton +GCGATTTAGAGGAGGA-P0010_2,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-924,Marmoset-924,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,12041,4232,0.0009616630850359,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGATTTAGAGGAGGA,P0010_2,231224,Princeton +GGCAATCGTTTAACGG-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-203,Marmoset-203,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,11677,4261,0.0003445536422077,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCAATCGTTTAACGG,P0010_2,231224,Princeton +CATAACGGTTCCTGTG-P0010_2,Glut Sero Dopa,F M Glut,F Glut,BF SKOR1 Glut,Marmoset-831,Marmoset-831,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,11509,4291,0.0015293544856831,Callithrix jacchus,CS20250428_GROUP_0008,Interneuron,,BF|SKOR1|Glut,19,,,,,#eb0077,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CATAACGGTTCCTGTG,P0010_2,231224,Princeton +TGTGGAGCATAACGGG-P0010_2,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-300,Marmoset-300,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,9648,3838,0.000400675839046,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGTGGAGCATAACGGG,P0010_2,231224,Princeton +GCCACTAAGTTATGTG-P0010_2,Subpallium GABA,CN MGE GABA,STR SST GABA,STR SST-ADARB2 GABA,Marmoset-739,Marmoset-739,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,7796,3445,0.0004128866712562,Callithrix jacchus,CS20250428_GROUP_0042,Interneuron,,STR|SST|ADARB2|GABA,30,,,,,#cfebed,,CS20250428_SUBCL_0032,,STR|SST|GABA,20,#ed8d40,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCACTAAGTTATGTG,P0010_2,231224,Princeton +CGCATGATCCATTACT-P0010_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-1226,Marmoset-1226,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,7181,3586,0.000184638382052,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCATGATCCATTACT,P0010_2,231224,Princeton +CTGGCTTTCACTCGCT-P0010_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-107,Marmoset-107,CL:0000003,P0010_2,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_D7,477,14,1827,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_G1,448,7,189.1,BR_PXA_231120_1,SI-TT-D7_i7,SI-TT-D7_b(i5),SI-NA-G1,2150,1299,0.0047549223527312,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTGGCTTTCACTCGCT,P0010_2,231224,Princeton +CATTTGTTCTTGACCC-P0010_1,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-104,Marmoset-104,CL:0000003,P0010_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_C7,496,14,1281,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_F1,424,7,218.88,BR_PXA_231120_1,SI-TT-C7_i7,SI-TT-C7_b(i5),SI-NA-F1,61879,8678,0.0681785047054291,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CATTTGTTCTTGACCC,P0010_1,231224,Princeton +TCCCTGGTCACGTTAA-P0010_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1005,Marmoset-1005,CL:0000003,P0010_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_C7,496,14,1281,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_F1,424,7,218.88,BR_PXA_231120_1,SI-TT-C7_i7,SI-TT-C7_b(i5),SI-NA-F1,26632,6004,0.58937931060791,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCCTGGTCACGTTAA,P0010_1,231224,Princeton +AGTGCCGGTTATCGAG-P0010_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-1228,Marmoset-1228,CL:0000003,P0010_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_C7,496,14,1281,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_F1,424,7,218.88,BR_PXA_231120_1,SI-TT-C7_i7,SI-TT-C7_b(i5),SI-NA-F1,17844,5056,0.461340606212616,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTGCCGGTTATCGAG,P0010_1,231224,Princeton +GCTGCATCATTATGCG-P0010_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-358,Marmoset-358,CL:0000003,P0010_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_C7,496,14,1281,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_F1,424,7,218.88,BR_PXA_231120_1,SI-TT-C7_i7,SI-TT-C7_b(i5),SI-NA-F1,17721,5316,0.001721654785797,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTGCATCATTATGCG,P0010_1,231224,Princeton +TCGGTTACACGCAACT-P0010_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-521,Marmoset-521,CL:0000003,P0010_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_C7,496,14,1281,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_F1,424,7,218.88,BR_PXA_231120_1,SI-TT-C7_i7,SI-TT-C7_b(i5),SI-NA-F1,13482,5012,0.565861701965332,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCGGTTACACGCAACT,P0010_1,231224,Princeton +CCTTAGTGTTACTTCA-P0010_1,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Marmoset-1229,Marmoset-1229,CL:0000003,P0010_1,cjCroissant,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231026,LPLCXR_231026_1,LPLCXR_231026_1_C7,496,14,1281,BR_PXR_231108_1,231024,LPLCXA_231024_1,LPLCXA_231024_1_F1,424,7,218.88,BR_PXA_231120_1,SI-TT-C7_i7,SI-TT-C7_b(i5),SI-NA-F1,6043,2647,0.0015436478424817,Callithrix jacchus,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTTAGTGTTACTTCA,P0010_1,231224,Princeton +CCGTTAACATGTTGTG-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-94,Marmoset-94,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,75624,9390,0.730609059333801,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCGTTAACATGTTGTG,P0011_1,231224,Princeton +GGTTTCTGTGGCTTCC-P0011_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-1026,Marmoset-1026,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,60146,8575,0.779064178466797,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGTTTCTGTGGCTTCC,P0011_1,231224,Princeton +CTACTTAGTTCACTGT-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Striosome MSN,Marmoset-200,Marmoset-200,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,55445,8253,0.549731314182281,Callithrix jacchus,CS20250428_GROUP_0050,LGE,CL:4030048,STRd|D1 Striosome MSN,52,He et al. 2021,D1-Striosome,,KCNIP1,#d62728,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTACTTAGTTCACTGT,P0011_1,231224,Princeton +ACCATAATCTTGAGGT-P0011_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-205,Marmoset-205,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,48854,7391,0.704495906829834,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCATAATCTTGAGGT,P0011_1,231224,Princeton +GCATCCTTCGCGCTAA-P0011_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-70,Marmoset-70,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,46154,6460,0.0019582400564104,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCATCCTTCGCGCTAA,P0011_1,231224,Princeton +TACCTTAGTGTGCACG-P0011_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-67,Marmoset-67,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,41782,7234,0.674857616424561,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCTTAGTGTGCACG,P0011_1,231224,Princeton +CTCTTGATCATGCTCC-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-1230,Marmoset-1230,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,40869,6717,0.0274631548672915,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCTTGATCATGCTCC,P0011_1,231224,Princeton +ATTCAACCATGCTATG-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-71,Marmoset-71,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,39628,6062,0.002572362544015,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCAACCATGCTATG,P0011_1,231224,Princeton +GCAACAGCAAAGCTCC-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-95,Marmoset-95,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,39117,6875,0.0023955190554261,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCAACAGCAAAGCTCC,P0011_1,231224,Princeton +TAATCACCAACCTAAT-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-89,Marmoset-89,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,35016,6367,0.375515580177307,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAATCACCAACCTAAT,P0011_1,231224,Princeton +CGGCAATGTTCAAGCA-P0011_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-207,Marmoset-207,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,34604,5909,0.0719216242432594,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGCAATGTTCAAGCA,P0011_1,231224,Princeton +ACTCGCTTCTTTGACT-P0011_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-918,Marmoset-918,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,32666,5528,0.0070513780228793,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTCGCTTCTTTGACT,P0011_1,231224,Princeton +TACTGCACATCCCGCT-P0011_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-204,Marmoset-204,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,30096,5365,0.0028974737506359,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACTGCACATCCCGCT,P0011_1,231224,Princeton +TATTTGCTCGAGCTAT-P0011_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRd D2 Matrix MSN,Marmoset-69,Marmoset-69,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,29996,6280,0.017973093315959,Callithrix jacchus,CS20250428_GROUP_0052,LGE,CL:4030047,STRd|D2 Matrix MSN,53,He et al. 2021,D2-Matrix,,STXBP6,#aec7e8,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATTTGCTCGAGCTAT,P0011_1,231224,Princeton +CTGTATTTCATCCTAT-P0011_1,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR TAC3-PLPP4 GABA,Marmoset-282,Marmoset-282,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,20200,5511,0.764137625694275,Callithrix jacchus,CS20250428_GROUP_0045,Interneuron,CL:4042001,STR|TAC3|PLPP4|GABA,27,Krienen et al. 2020,LHX6 TAC3,,ST18,#ffff00,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGTATTTCATCCTAT,P0011_1,231224,Princeton +GTTTAGCAGGTGTTAC-P0011_1,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-1231,Marmoset-1231,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,18518,5438,0.0020695372950285,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTTAGCAGGTGTTAC,P0011_1,231224,Princeton +GGATTGCGTGGTTATG-P0011_1,Nonneuron,OPC-Oligo,COP,COP,Marmoset-6,Marmoset-6,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,18230,4618,0.511530876159668,Callithrix jacchus,CS20250428_GROUP_0009,Nonneuron,CL:4023059,COP,13,Marques et al. 2016,,,,#922047,,CS20250428_SUBCL_0010,CL:4023059,COP,9,#e3cba4,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGATTGCGTGGTTATG,P0011_1,231224,Princeton +TGAAGTGAGTTCCCGT-P0011_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-352,Marmoset-352,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,10946,4092,0.0158685781061649,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGAAGTGAGTTCCCGT,P0011_1,231224,Princeton +CAACTAATCTCATCAT-P0011_1,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-368,Marmoset-368,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,8634,3051,0.0019582400564104,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAACTAATCTCATCAT,P0011_1,231224,Princeton +CGCACAATCCGCTAGA-P0011_1,Subpallium GABA,CN LGE GABA,OT Granular GABA,OT D1 ICj,Marmoset-1232,Marmoset-1232,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,7484,2972,0.0023955190554261,Callithrix jacchus,CS20250428_GROUP_0024,LGE,CL:4030053,OT|D1 ICj,59,He et al. 2021,D1-ICj (Islands of Calleja),D1 Islands of Calleja,"CPNE4, DRD3",#ff7f0e,,CS20250428_SUBCL_0021,CL:4030053,OT|Granular|GABA,34,#9160cb,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCACAATCCGCTAGA,P0011_1,231224,Princeton +GTCATGAGTGATGAGG-P0011_1,Nonneuron,Vascular,VLMC,VLMC,Marmoset-115,Marmoset-115,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,6518,3050,0.003230269998312,Callithrix jacchus,CS20250428_GROUP_0062,Nonneuron,CL:4023051,VLMC,17,Yao et al. 2023,,,"PDGFRA, DCN",#c3ec86,,CS20250428_SUBCL_0035,CL:4023051,VLMC,13,#226a65,,CS20250428_CLASS_0011,CL:0000192,Vascular,4,#cba5ec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTCATGAGTGATGAGG,P0011_1,231224,Princeton +AGAACCAAGTGCTGTG-P0011_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1348,Marmoset-1348,CL:0000003,P0011_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_E7,511,13,1090,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_D2,390,7,318.0,BR_PXA_231120_1,SI-TT-E7_i7,SI-TT-E7_b(i5),SI-NA-D2,5728,3024,0.0037718478124588,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGAACCAAGTGCTGTG,P0011_1,231224,Princeton +GGGAGTAGTGTCCAAA-P0011_2,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-223,Marmoset-223,CL:0000003,P0011_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_F7,502,13,1134,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_E2,385,7,756.0,BR_PXA_231120_1,SI-TT-F7_i7,SI-TT-F7_b(i5),SI-NA-E2,15447,4547,0.0004666049499064,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGGAGTAGTGTCCAAA,P0011_2,231224,Princeton +CAGCATGTCATTACAG-P0011_2,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Marmoset-1419,Marmoset-1419,CL:0000003,P0011_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_F7,502,13,1134,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_E2,385,7,756.0,BR_PXA_231120_1,SI-TT-F7_i7,SI-TT-F7_b(i5),SI-NA-E2,13784,4298,0.0005752229481004,Callithrix jacchus,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAGCATGTCATTACAG,P0011_2,231224,Princeton +GCCACACAGGAGGACT-P0011_2,Subpallium GABA,CN MGE GABA,CN LAMP5-LHX6 GABA,LAMP5-LHX6 GABA,Marmoset-369,Marmoset-369,CL:0000003,P0011_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_F7,502,13,1134,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_E2,385,7,756.0,BR_PXA_231120_1,SI-TT-F7_i7,SI-TT-F7_b(i5),SI-NA-E2,10357,3660,0.0005731873097829,Callithrix jacchus,CS20250428_GROUP_0005,Interneuron,,LAMP5|LHX6|GABA,25,,LAMP5,,"LAMP5, LHX6",#00af88,,CS20250428_SUBCL_0003,,CN|LAMP5|LHX6|GABA,17,#f48d44,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCACACAGGAGGACT,P0011_2,231224,Princeton +TTCAGTTTCCATTACT-P0011_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-673,Marmoset-673,CL:0000003,P0011_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231101,LPLCXR_231101_1,LPLCXR_231101_1_F7,502,13,1134,BR_PXR_231108_1,231031,LPLCXA_231031_1,LPLCXA_231031_1_E2,385,7,756.0,BR_PXA_231120_1,SI-TT-F7_i7,SI-TT-F7_b(i5),SI-NA-E2,5949,2723,0.0006030563963577,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TTCAGTTTCCATTACT,P0011_2,231224,Princeton +TGTTGCACACGTGCTG-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1436,Marmoset-1436,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,92798,10451,0.0558490119874477,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TGTTGCACACGTGCTG,P0014_1,240110,Princeton +GTGTCCAAGTTAGGCT-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1351,Marmoset-1351,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,96486,10025,0.359885722398758,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTGTCCAAGTTAGGCT,P0014_1,240110,Princeton +TACCTCATCATTGCAA-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Marmoset-1441,Marmoset-1441,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,99070,9605,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,TACCTCATCATTGCAA,P0014_1,240110,Princeton +AAGCATGAGGAGCATA-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1443,Marmoset-1443,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,85160,9531,0.0016064384253695,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGCATGAGGAGCATA,P0014_1,240110,Princeton +TAGTTTGAGGCATGAA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1379,Marmoset-1379,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,70532,9575,0.670365393161774,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGTTTGAGGCATGAA,P0014_1,240110,Princeton +TTATTGCTCCCTGATC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1376,Marmoset-1376,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,95809,9202,0.0044258390553295,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTATTGCTCCCTGATC,P0014_1,240110,Princeton +ATGGTCTAGGCCTGGT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1458,Marmoset-1458,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,93717,9684,0.387347787618637,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATGGTCTAGGCCTGGT,P0014_1,240110,Princeton +GACACCGGTTGAGGTC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PVALB GABA,Marmoset-1483,Marmoset-1483,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,91869,9430,0.002262104069814,Callithrix jacchus,CS20250428_GROUP_0033,Interneuron,PR 2577,SN|GATA3|PVALB|GABA,41,Partanen et al. 2022,aSNpr,,Six3 and Foxp1,#017d7c,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GACACCGGTTGAGGTC,P0014_1,240110,Princeton +TGGTTCCTCATTCATC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1374,Marmoset-1374,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,97934,9650,0.494495987892151,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGTTCCTCATTCATC,P0014_1,240110,Princeton +AATATCCCATACCCGG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1499,Marmoset-1499,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,88309,9349,0.0021785176359117,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AATATCCCATACCCGG,P0014_1,240110,Princeton +CCTTATGTCAATTACG-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1386,Marmoset-1386,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,97278,10801,0.0064714774489402,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTTATGTCAATTACG,P0014_1,240110,Princeton +CTTACCGGTAGGATCC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1385,Marmoset-1385,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,93560,9417,0.0116105088964105,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTACCGGTAGGATCC,P0014_1,240110,Princeton +ATTAGTCCACAGAAAC-P0014_1,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Marmoset-1459,Marmoset-1459,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,92859,9622,0.0018289202125743,Callithrix jacchus,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATTAGTCCACAGAAAC,P0014_1,240110,Princeton +CCCGCTTCATCCATCT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1522,Marmoset-1522,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,92831,9146,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CCCGCTTCATCCATCT,P0014_1,240110,Princeton +TATGGCCCAGTAGCCT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1527,Marmoset-1527,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,93713,9133,0.0030823615379631,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TATGGCCCAGTAGCCT,P0014_1,240110,Princeton +GCATGAAAGCTGTAAC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1353,Marmoset-1353,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,90543,9601,0.002750729676336,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCATGAAAGCTGTAAC,P0014_1,240110,Princeton +CGTCAATAGCTGTAAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1530,Marmoset-1530,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,84870,9697,0.224907770752907,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CGTCAATAGCTGTAAC,P0014_1,240110,Princeton +GATTACTCAAGTGTTT-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1445,Marmoset-1445,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,80633,8920,0.0019088692497462,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GATTACTCAAGTGTTT,P0014_1,240110,Princeton +CAAGTTATCATCCACC-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Marmoset-1446,Marmoset-1446,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,94867,9414,0.0033773025497794,Callithrix jacchus,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,CAAGTTATCATCCACC,P0014_1,240110,Princeton +ACCTGGATCCCGAACA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1521,Marmoset-1521,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,72481,8728,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACCTGGATCCCGAACA,P0014_1,240110,Princeton +ATCAGGTTCAGGCTAT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1410,Marmoset-1410,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,76096,8850,0.0056855082511901,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCAGGTTCAGGCTAT,P0014_1,240110,Princeton +CTAACCTGTTTAGCGA-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1403,Marmoset-1403,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,67589,8637,0.0017661022720858,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAACCTGTTTAGCGA,P0014_1,240110,Princeton +CCTAATAAGGAACCAA-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Marmoset-1439,Marmoset-1439,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,81091,10726,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,CCTAATAAGGAACCAA,P0014_1,240110,Princeton +ACCAGGCTCACTCAAA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1500,Marmoset-1500,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,41734,8226,0.733865797519684,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCAGGCTCACTCAAA,P0014_1,240110,Princeton +CGCCACACAATAGTCT-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1384,Marmoset-1384,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,82642,9101,0.147140130400658,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCCACACAATAGTCT,P0014_1,240110,Princeton +GGATAACCAGTTTCTC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1506,Marmoset-1506,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,72847,9078,0.0552320927381516,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGATAACCAGTTTCTC,P0014_1,240110,Princeton +TATCACGCATTAAACC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1460,Marmoset-1460,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,81253,9292,0.0051075709052383,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TATCACGCATTAAACC,P0014_1,240110,Princeton +TCCTTAGTCCATAATG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1355,Marmoset-1355,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,70948,9052,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCTTAGTCCATAATG,P0014_1,240110,Princeton +GGTCTTTGTATCTGGA-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1448,Marmoset-1448,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,59217,8761,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGTCTTTGTATCTGGA,P0014_1,240110,Princeton +TTGCGAGTCATTGACA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1502,Marmoset-1502,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,78128,9319,0.0015461560105904,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCGAGTCATTGACA,P0014_1,240110,Princeton +GTTGCATAGGTTACAC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1344,Marmoset-1344,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,72254,8822,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTGCATAGGTTACAC,P0014_1,240110,Princeton +GCTGCAATCTTTGACT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1533,Marmoset-1533,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,71589,8459,0.0094873085618019,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCTGCAATCTTTGACT,P0014_1,240110,Princeton +TTCACTGTCTGCAAAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1464,Marmoset-1464,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,63272,8626,0.0022278407122939,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TTCACTGTCTGCAAAC,P0014_1,240110,Princeton +GTGCTTCTCCTCATCA-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1371,Marmoset-1371,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,63152,9466,0.0030823615379631,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTGCTTCTCCTCATCA,P0014_1,240110,Princeton +TCTTAGTTCACTAAGC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1362,Marmoset-1362,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,62432,8796,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTTAGTTCACTAAGC,P0014_1,240110,Princeton +ACGAATCTCAATCTCT-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1363,Marmoset-1363,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,68052,8649,0.0018265089020133,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGAATCTCAATCTCT,P0014_1,240110,Princeton +TTTGTTGGTCATAACG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1364,Marmoset-1364,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,85669,9258,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGTTGGTCATAACG,P0014_1,240110,Princeton +CAATCGCCAACTAACT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1531,Marmoset-1531,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,55423,8908,0.122757263481617,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CAATCGCCAACTAACT,P0014_1,240110,Princeton +GTCATCCTCTCGCCTG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1535,Marmoset-1535,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,55297,9312,0.0505582354962826,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTCATCCTCTCGCCTG,P0014_1,240110,Princeton +TTTGTCTAGTTTGAGC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1409,Marmoset-1409,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,59635,7948,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGTCTAGTTTGAGC,P0014_1,240110,Princeton +GTATTGTCACAAAGCG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1466,Marmoset-1466,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,23100,5761,0.0020972576458007,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTATTGTCACAAAGCG,P0014_1,240110,Princeton +AGCCGCTAGTCATCCC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1461,Marmoset-1461,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,56043,7853,0.0015461560105904,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGCCGCTAGTCATCCC,P0014_1,240110,Princeton +CCTCAGTTCTTAGTGA-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PVALB GABA,Marmoset-1484,Marmoset-1484,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,62235,9591,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0033,Interneuron,PR 2577,SN|GATA3|PVALB|GABA,41,Partanen et al. 2022,aSNpr,,Six3 and Foxp1,#017d7c,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTCAGTTCTTAGTGA,P0014_1,240110,Princeton +CGCATTACATCATGGC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1383,Marmoset-1383,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,60041,8288,0.155078589916229,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGCATTACATCATGGC,P0014_1,240110,Princeton +ACCTTCATCATTCATC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1387,Marmoset-1387,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,65590,8209,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTTCATCATTCATC,P0014_1,240110,Princeton +CATTTGTTCTCTAGCC-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1449,Marmoset-1449,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,54834,8436,0.348717480897903,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CATTTGTTCTCTAGCC,P0014_1,240110,Princeton +TGAGGTGCATGAATCT-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Marmoset-1442,Marmoset-1442,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,60570,8682,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,TGAGGTGCATGAATCT,P0014_1,240110,Princeton +CCTAAGGTCCAGGTTG-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Marmoset-1451,Marmoset-1451,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,61711,8256,0.0270411986857653,Callithrix jacchus,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,CCTAAGGTCCAGGTTG,P0014_1,240110,Princeton +GTCCATTGTCTTACTA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1534,Marmoset-1534,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,54644,8532,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTCCATTGTCTTACTA,P0014_1,240110,Princeton +AACAAGCCATGGAGGC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1537,Marmoset-1537,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,60647,8571,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AACAAGCCATGGAGGC,P0014_1,240110,Princeton +AATATCCCACATTGCA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1541,Marmoset-1541,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,57662,8108,0.0582193545997143,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AATATCCCACATTGCA,P0014_1,240110,Princeton +TTGGATTCATTGACAT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1544,Marmoset-1544,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,53419,8009,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TTGGATTCATTGACAT,P0014_1,240110,Princeton +CAAGGCTGTCCGCTGT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1414,Marmoset-1414,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,59166,8135,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAAGGCTGTCCGCTGT,P0014_1,240110,Princeton +CTCTAGCTCCTCCATA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-396,Marmoset-396,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,66284,9320,0.0483013167977333,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCTAGCTCCTCCATA,P0014_1,240110,Princeton +GTCATGCCATAAGTCT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1411,Marmoset-1411,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,59156,8704,0.0024066369514912,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCATGCCATAAGTCT,P0014_1,240110,Princeton +CGGCCATAGGGACTAA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1356,Marmoset-1356,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,45444,8748,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGCCATAGGGACTAA,P0014_1,240110,Princeton +CCATAGCCAACACCTA-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1377,Marmoset-1377,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,50695,8740,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCATAGCCAACACCTA,P0014_1,240110,Princeton +TCCCGTTAGTAGCGGG-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1413,Marmoset-1413,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,44041,7149,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCCGTTAGTAGCGGG,P0014_1,240110,Princeton +GAGCCTTCAACATAAG-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PVALB GABA,Marmoset-1485,Marmoset-1485,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,50004,8299,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0033,Interneuron,PR 2577,SN|GATA3|PVALB|GABA,41,Partanen et al. 2022,aSNpr,,Six3 and Foxp1,#017d7c,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGCCTTCAACATAAG,P0014_1,240110,Princeton +GATTGTTCATTGCGAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1525,Marmoset-1525,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,64721,8479,0.28953891992569,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GATTGTTCATTGCGAC,P0014_1,240110,Princeton +GGGATTAAGCTTTGGG-P0014_1,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Marmoset-1469,Marmoset-1469,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,32385,7691,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGGATTAAGCTTTGGG,P0014_1,240110,Princeton +ACGTCCAAGCCATCAG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1545,Marmoset-1545,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,56086,8181,0.172598004341125,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACGTCCAAGCCATCAG,P0014_1,240110,Princeton +ACCTGTTGTCATCATC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1368,Marmoset-1368,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,66099,8300,0.0029487691354006,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCTGTTGTCATCATC,P0014_1,240110,Princeton +GCGCTTGCAATTATGC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1345,Marmoset-1345,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,62148,8368,0.190530493855476,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCGCTTGCAATTATGC,P0014_1,240110,Princeton +GTCATCACAACAACAA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1526,Marmoset-1526,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,56774,8659,0.499421089887619,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTCATCACAACAACAA,P0014_1,240110,Princeton +GGAAGCTAGCATTTCT-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Marmoset-1453,Marmoset-1453,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,53649,8750,0.0024066369514912,Callithrix jacchus,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,GGAAGCTAGCATTTCT,P0014_1,240110,Princeton +GCACATTAGTTGGCCA-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1404,Marmoset-1404,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,32765,7732,0.0020715394057333,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCACATTAGTTGGCCA,P0014_1,240110,Princeton +GGAACCACAATGCCTA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-397,Marmoset-397,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,42934,8119,0.0907994583249092,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGAACCACAATGCCTA,P0014_1,240110,Princeton +CCCTGGACAACTAGAA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1381,Marmoset-1381,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,49834,7724,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCCTGGACAACTAGAA,P0014_1,240110,Princeton +CTATTCAGTCCGTAGG-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1440,Marmoset-1440,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,44471,7708,0.0035293432883918,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTATTCAGTCCGTAGG,P0014_1,240110,Princeton +GCACGCTAGGATCACT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1471,Marmoset-1471,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,76311,8734,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCACGCTAGGATCACT,P0014_1,240110,Princeton +ACCTTCATCGCCTAAG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1475,Marmoset-1475,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,55328,8205,0.004601361695677,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACCTTCATCGCCTAAG,P0014_1,240110,Princeton +ACTTGCACAAGGTGGC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1380,Marmoset-1380,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,49212,7763,0.0067132553085684,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACTTGCACAAGGTGGC,P0014_1,240110,Princeton +GTCTCACTCGTTAAGC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1476,Marmoset-1476,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,55866,8254,0.129184529185295,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTCTCACTCGTTAAGC,P0014_1,240110,Princeton +TTCGGTACATCTAGCA-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1388,Marmoset-1388,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,42510,7247,0.381191432476044,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTCGGTACATCTAGCA,P0014_1,240110,Princeton +CGTGCTGCATGAGTTT-P0014_1,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Marmoset-1477,Marmoset-1477,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,41786,6913,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CGTGCTGCATGAGTTT,P0014_1,240110,Princeton +TCCGGAATCCTCGATC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1369,Marmoset-1369,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,47129,7297,0.002441331744194,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCCGGAATCCTCGATC,P0014_1,240110,Princeton +CCGGTAGGTTACAAAC-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Marmoset-1454,Marmoset-1454,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,46988,7586,0.0015461560105904,Callithrix jacchus,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,CCGGTAGGTTACAAAC,P0014_1,240110,Princeton +CTAACCACACCTGCCT-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1437,Marmoset-1437,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,45210,8248,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTAACCACACCTGCCT,P0014_1,240110,Princeton +GGTGTCCAGTTATGTG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1540,Marmoset-1540,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,44362,7991,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGTGTCCAGTTATGTG,P0014_1,240110,Princeton +CCTTTAGTCGCAAACT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1478,Marmoset-1478,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,44949,8703,0.102462485432625,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CCTTTAGTCGCAAACT,P0014_1,240110,Princeton +ACATAGCTCCTTAGGG-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1370,Marmoset-1370,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,47228,7666,0.002441331744194,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACATAGCTCCTTAGGG,P0014_1,240110,Princeton +GTTCTTGTCTTGACCC-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Marmoset-1456,Marmoset-1456,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,36872,8228,0.0681034773588181,Callithrix jacchus,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,GTTCTTGTCTTGACCC,P0014_1,240110,Princeton +CGGAGCAAGGAATAAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1462,Marmoset-1462,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,46510,7572,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CGGAGCAAGGAATAAC,P0014_1,240110,Princeton +AGCAGGTAGCACGTTG-P0014_1,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Marmoset-1470,Marmoset-1470,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,37731,8295,0.0018289202125743,Callithrix jacchus,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGCAGGTAGCACGTTG,P0014_1,240110,Princeton +AATGTCCAGGCCTAAT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1547,Marmoset-1547,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,40614,8416,0.119956254959106,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AATGTCCAGGCCTAAT,P0014_1,240110,Princeton +CTGCTACTCGATATTG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1365,Marmoset-1365,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,37321,7845,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTGCTACTCGATATTG,P0014_1,240110,Princeton +TACTGACAGGAGCAAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1523,Marmoset-1523,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,46605,8680,0.411587923765182,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TACTGACAGGAGCAAC,P0014_1,240110,Princeton +TCGTGCTTCGTCAAGT-P0014_1,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Marmoset-1420,Marmoset-1420,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,17010,5870,0.0110839614644647,Callithrix jacchus,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCGTGCTTCGTCAAGT,P0014_1,240110,Princeton +GCACTTACAAGTTATC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1463,Marmoset-1463,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,38558,8017,0.0024965901393443,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCACTTACAAGTTATC,P0014_1,240110,Princeton +TCCTCTAAGTGACCTG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1528,Marmoset-1528,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,35163,7200,0.0019093552837148,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TCCTCTAAGTGACCTG,P0014_1,240110,Princeton +ACTTGCACAGTCTATG-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1457,Marmoset-1457,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,36607,7575,0.0019088692497462,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACTTGCACAGTCTATG,P0014_1,240110,Princeton +GTTCGCTTCTCTAGCC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1467,Marmoset-1467,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,40054,7603,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GTTCGCTTCTCTAGCC,P0014_1,240110,Princeton +ACCTTGCTCTTGACCC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1473,Marmoset-1473,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,32192,7286,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACCTTGCTCTTGACCC,P0014_1,240110,Princeton +TTACGTTTCAATGTCA-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1354,Marmoset-1354,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,34604,6579,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTACGTTTCAATGTCA,P0014_1,240110,Princeton +CATGAGGCACGAATTT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1546,Marmoset-1546,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,35235,7888,0.430203557014465,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CATGAGGCACGAATTT,P0014_1,240110,Princeton +ACACGGACACGTTACA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1549,Marmoset-1549,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,47788,7801,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACACGGACACGTTACA,P0014_1,240110,Princeton +CCTTAGTGTTAGCGTA-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Marmoset-1452,Marmoset-1452,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,35764,6719,0.433045446872711,Callithrix jacchus,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,CCTTAGTGTTAGCGTA,P0014_1,240110,Princeton +TAGCTTAAGTTATGTG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1552,Marmoset-1552,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,32243,6707,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TAGCTTAAGTTATGTG,P0014_1,240110,Princeton +GGAAGCTAGTTCCCGT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1399,Marmoset-1399,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,41585,7466,0.0078273229300975,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGAAGCTAGTTCCCGT,P0014_1,240110,Princeton +TCTAGCGAGCTATGAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1550,Marmoset-1550,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,27186,6144,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TCTAGCGAGCTATGAC,P0014_1,240110,Princeton +ACGAATCTCCCATAAA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1553,Marmoset-1553,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,36546,6995,0.0035985538270324,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACGAATCTCCCATAAA,P0014_1,240110,Princeton +TCATTGCGTCCCGAAG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1501,Marmoset-1501,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,31277,6751,0.43709397315979,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATTGCGTCCCGAAG,P0014_1,240110,Princeton +CTTATGTTCCAAACAC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1474,Marmoset-1474,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,32690,6688,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTTATGTTCCAAACAC,P0014_1,240110,Princeton +TTCAGTTTCATAACCA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1554,Marmoset-1554,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,27313,7116,0.0019093552837148,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TTCAGTTTCATAACCA,P0014_1,240110,Princeton +GTGTTACAGCACAGGG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1349,Marmoset-1349,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,21445,5797,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTGTTACAGCACAGGG,P0014_1,240110,Princeton +TTGCGTCTCAGGAAGC-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1367,Marmoset-1367,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,56455,7900,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTGCGTCTCAGGAAGC,P0014_1,240110,Princeton +GCGGAACCAACCTGGT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1372,Marmoset-1372,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,26531,6816,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCGGAACCAACCTGGT,P0014_1,240110,Princeton +CGGTAACGTTTATCTG-P0014_1,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Marmoset-1421,Marmoset-1421,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,36304,6665,0.0027953400276601,Callithrix jacchus,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGGTAACGTTTATCTG,P0014_1,240110,Princeton +TGGCTATAGGTGAGAC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1394,Marmoset-1394,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,39037,7185,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGCTATAGGTGAGAC,P0014_1,240110,Princeton +GTCATCACAACACCTA-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN SOX6 Dopa,Marmoset-1447,Marmoset-1447,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,24673,6208,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0035,Dopaminergic,CL:4042025,SN|SOX6|Dopa,23,"Tushar et al, 2022",,,"TH, SOX6",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,GTCATCACAACACCTA,P0014_1,240110,Princeton +GTGTAACTCCCTGACT-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1503,Marmoset-1503,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,50386,8082,0.0018678770866245,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTGTAACTCCCTGACT,P0014_1,240110,Princeton +GATTATGTCACGTTAA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1548,Marmoset-1548,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,29179,7239,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GATTATGTCACGTTAA,P0014_1,240110,Princeton +AATACCGGTCCTTCTC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1551,Marmoset-1551,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,21795,6329,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AATACCGGTCCTTCTC,P0014_1,240110,Princeton +TTGGAGGCATTGTTGG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1536,Marmoset-1536,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,27013,6129,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TTGGAGGCATTGTTGG,P0014_1,240110,Princeton +GAGCGGTCATTGTTGG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1529,Marmoset-1529,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,19331,5080,0.0015800987603142,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GAGCGGTCATTGTTGG,P0014_1,240110,Princeton +GCTGCATCAGAGGGAG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1382,Marmoset-1382,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,25158,6070,0.0140553712844849,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTGCATCAGAGGGAG,P0014_1,240110,Princeton +GGAAACTCACCTGCCT-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1555,Marmoset-1555,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,36680,6960,0.284915208816528,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGAAACTCACCTGCCT,P0014_1,240110,Princeton +AACAAGCCACAGGAAT-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR GAD2 Dopa,Marmoset-1455,Marmoset-1455,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,41142,7064,0.0020715394057333,Callithrix jacchus,CS20250428_GROUP_0031,Dopaminergic,,SN|VTR|GAD2|Dopa,24,"Zachary et al, 2024",,,"TH, GAD2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,,Glut|Sero|Dopa,2,#91f4bb,,AACAAGCCACAGGAAT,P0014_1,240110,Princeton +TATAGCCAGGTTTGCG-P0014_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1507,Marmoset-1507,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,22204,6757,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TATAGCCAGGTTTGCG,P0014_1,240110,Princeton +AGGCTAAAGGCTATGT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1357,Marmoset-1357,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,29938,7766,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGCTAAAGGCTATGT,P0014_1,240110,Princeton +TAGCTAATCCTAGTAA-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1465,Marmoset-1465,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,14175,4832,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TAGCTAATCCTAGTAA,P0014_1,240110,Princeton +AATGCGCGTGCAATGC-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1468,Marmoset-1468,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,34307,6759,0.0020972576458007,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AATGCGCGTGCAATGC,P0014_1,240110,Princeton +GGTAACCGTTTCCACG-P0014_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1556,Marmoset-1556,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,35432,7997,0.283343940973282,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGTAACCGTTTCCACG,P0014_1,240110,Princeton +TAGGAACCAACGTGCT-P0014_1,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Marmoset-1422,Marmoset-1422,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,14365,4855,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGAACCAACGTGCT,P0014_1,240110,Princeton +ATGGTTATCAATCTAG-P0014_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1450,Marmoset-1450,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,3940,2021,0.0020332033745944,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATGGTTATCAATCTAG,P0014_1,240110,Princeton +GTGCGGTTCCATAAGC-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1373,Marmoset-1373,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,20192,5963,0.0012986485380679,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTGCGGTTCCATAAGC,P0014_1,240110,Princeton +TACGCTTGTTAAGTGT-P0014_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-526,Marmoset-526,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,4244,1781,0.0028277349192649,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TACGCTTGTTAAGTGT,P0014_1,240110,Princeton +GTTCACCTCTTTGACT-P0014_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1398,Marmoset-1398,CL:0000003,P0014_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_G7,520,13,1044.8,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_A3,394,7,130.0,BR_PXA_231212_1,SI-TT-G7_i7,SI-TT-G7_b(i5),SI-NA-A3,5741,2392,0.0015689497813582,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTCACCTCTTTGACT,P0014_1,240110,Princeton +AGAGGATGTATCTGGA-P0014_2,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1444,Marmoset-1444,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,92959,9510,0.0006216999609023,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AGAGGATGTATCTGGA,P0014_2,240110,Princeton +GGCTGAGAGACAAAGT-P0014_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1504,Marmoset-1504,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,84340,9388,0.438590109348297,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCTGAGAGACAAAGT,P0014_2,240110,Princeton +ATAAGTCGTTTGGCGG-P0014_2,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1538,Marmoset-1538,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,69633,8651,0.0194818135350943,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ATAAGTCGTTTGGCGG,P0014_2,240110,Princeton +TTTGACCGTTCATTTG-P0014_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN GATA3-PAX8 GABA,Marmoset-1375,Marmoset-1375,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,34826,7791,0.0007767591741867,Callithrix jacchus,CS20250428_GROUP_0032,Interneuron,,SN|GATA3|PAX8|GABA,42,Partanen et al. 2022,pSNpr,,"Pax5, Ctip2, Pou6f2",#ff7266,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTTGACCGTTCATTTG,P0014_2,240110,Princeton +TGAAGTGAGGGTTAGA-P0014_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1350,Marmoset-1350,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,36860,6834,0.011848502792418,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGAAGTGAGGGTTAGA,P0014_2,240110,Princeton +CTCACACTCAAACTCA-P0014_2,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1539,Marmoset-1539,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,51214,7658,0.05214649066329,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTCACACTCAAACTCA,P0014_2,240110,Princeton +TGCATGAGTACGTTTC-P0014_2,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1524,Marmoset-1524,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,25337,6981,0.0113841034471989,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TGCATGAGTACGTTTC,P0014_2,240110,Princeton +ACGTCAAGTCGCAAAC-P0014_2,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1542,Marmoset-1542,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,35144,6764,0.0005809299764223,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,ACGTCAAGTCGCAAAC,P0014_2,240110,Princeton +TGCACACCAGCTTACA-P0014_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1366,Marmoset-1366,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,40057,7877,0.0323077738285065,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGCACACCAGCTTACA,P0014_2,240110,Princeton +ATTGACTCAGGCCTTG-P0014_2,Subpallium GABA,F M GABA,SN PAX7 GABA,SN SEMA5A GABA,Marmoset-1425,Marmoset-1425,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,25949,6389,0.0929044932126999,Callithrix jacchus,CS20250428_GROUP_0034,Interneuron,,SN|SEMA5A|GABA,45,,,,,#3604fb,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTGACTCAGGCCTTG,P0014_2,240110,Princeton +CCCTCACCAGGCTACT-P0014_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-527,Marmoset-527,CL:0000003,P0014_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_H7,489,13,866.25,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_B3,398,7,120.8,BR_PXA_231212_1,SI-TT-H7_i7,SI-TT-H7_b(i5),SI-NA-B3,7619,2805,0.0045756711624562,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CCCTCACCAGGCTACT,P0014_2,240110,Princeton +GAGCAAATCGGCTATG-P0015_1,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Marmoset-1488,Marmoset-1488,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,93145,9756,0.003565885592252,Callithrix jacchus,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGCAAATCGGCTATG,P0015_1,240110,Princeton +GCCACTAAGCTCAAAC-P0015_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1509,Marmoset-1509,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,74203,8734,0.169710054993629,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCACTAAGCTCAAAC,P0015_1,240110,Princeton +TAGGGTTTCCGTGACA-P0015_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1512,Marmoset-1512,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,67812,8418,0.0026880837976932,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGGGTTTCCGTGACA,P0015_1,240110,Princeton +CGAGGCAAGGAAGCAC-P0015_1,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Marmoset-859,Marmoset-859,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,55541,8234,0.0962191894650459,Callithrix jacchus,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,CGAGGCAAGGAAGCAC,P0015_1,240110,Princeton +CATCCTCAGTTAGGCT-P0015_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-929,Marmoset-929,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,63068,8013,0.140959993004799,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATCCTCAGTTAGGCT,P0015_1,240110,Princeton +AGGTCAAAGGAGGGTT-P0015_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-953,Marmoset-953,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,45545,7904,0.022156773135066,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGGTCAAAGGAGGGTT,P0015_1,240110,Princeton +GCCATTACAAACGGGC-P0015_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR LYPD6-RSPO2 GABA,Marmoset-946,Marmoset-946,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,37071,7876,0.0552880838513374,Callithrix jacchus,CS20250428_GROUP_0041,Interneuron,,STR|LYPD6|RSPO2|GABA,32,,,,,#a9f266,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCATTACAAACGGGC,P0015_1,240110,Princeton +ATTCACTTCACTTTAC-P0015_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-954,Marmoset-954,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,50598,8608,0.0122741432860494,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTCACTTCACTTTAC,P0015_1,240110,Princeton +GCCTTTATCTATTGTC-P0015_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-331,Marmoset-331,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,39573,7377,0.0086359605193138,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCCTTTATCTATTGTC,P0015_1,240110,Princeton +TTTCACCCAGGAACTG-P0015_1,Subpallium GABA-Glut,CN GABA-Glut,CN GABA-Glut,GPi Shell,Marmoset-861,Marmoset-861,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,42528,8832,0.0028910334222018,Callithrix jacchus,CS20250428_GROUP_0016,Interneuron,,GPi Shell,62,Wallace et al. 2017,GPi Shell,,,#642265,,CS20250428_SUBCL_0014,,CN|GABA|Glut,36,#d2599a,,CS20250428_CLASS_0002,,CN|GABA|Glut,12,#1c8d83,,CS20250428_NEIGH_0003,,Subpallium|GABA|Glut,4,#7e1d19,,TTTCACCCAGGAACTG,P0015_1,240110,Princeton +TACGCTTGTCACAAAT-P0015_1,Subpallium GABA,CN MGE GABA,STR SST GABA,STR SST-ADARB2 GABA,Marmoset-740,Marmoset-740,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,41263,7276,0.0531235300004482,Callithrix jacchus,CS20250428_GROUP_0042,Interneuron,,STR|SST|ADARB2|GABA,30,,,,,#cfebed,,CS20250428_SUBCL_0032,,STR|SST|GABA,20,#ed8d40,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACGCTTGTCACAAAT,P0015_1,240110,Princeton +GCTGCATCAGCCTGCA-P0015_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-790,Marmoset-790,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,37590,6691,0.0002772165171336,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GCTGCATCAGCCTGCA,P0015_1,240110,Princeton +CACCAACCAGGGAGCT-P0015_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1508,Marmoset-1508,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,41136,8030,0.0915393456816673,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACCAACCAGGGAGCT,P0015_1,240110,Princeton +TTAGAAGCATTTAAGC-P0015_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-792,Marmoset-792,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,29896,7405,0.0363279655575752,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TTAGAAGCATTTAAGC,P0015_1,240110,Princeton +AAATCCGGTGATGATT-P0015_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1513,Marmoset-1513,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,33978,8348,0.000510839454364,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAATCCGGTGATGATT,P0015_1,240110,Princeton +CTTGTTCCACAACAGG-P0015_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-930,Marmoset-930,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,29143,7067,0.0018375961808487,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTGTTCCACAACAGG,P0015_1,240110,Princeton +GGATGGCCATTAGCCA-P0015_1,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Marmoset-1479,Marmoset-1479,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,43267,7801,0.198694363236427,Callithrix jacchus,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GGATGGCCATTAGCCA,P0015_1,240110,Princeton +CCTTATGTCAATAGCC-P0015_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1480,Marmoset-1480,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,30356,7390,0.000182943418622,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CCTTATGTCAATAGCC,P0015_1,240110,Princeton +CTATTCAGTAATCGCA-P0015_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1515,Marmoset-1515,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,20208,6090,0.0042697181925177,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTATTCAGTAATCGCA,P0015_1,240110,Princeton +TGACCTTGTTTAACCC-P0015_1,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-314,Marmoset-314,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,12650,4337,0.0051289526745677,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGACCTTGTTTAACCC,P0015_1,240110,Princeton +TACCAGGTCACGAATC-P0015_1,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-948,Marmoset-948,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,14585,4679,0.0011214141268283,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACCAGGTCACGAATC,P0015_1,240110,Princeton +CAAGGGAGTCATAAGT-P0015_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1516,Marmoset-1516,CL:0000003,P0015_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_A8,479,12,1123.5,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_C3,380,7,170.6,BR_PXA_231212_1,SI-TT-A8_i7,SI-TT-A8_b(i5),SI-NA-C3,16639,5866,0.0005119037814438,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAAGGGAGTCATAAGT,P0015_1,240110,Princeton +CGTGACATCAATTGGC-P0015_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1511,Marmoset-1511,CL:0000003,P0015_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_B8,486,12,1218,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_D3,373,7,184.4,BR_PXA_231212_1,SI-TT-B8_i7,SI-TT-B8_b(i5),SI-NA-D3,84748,9775,0.357312262058258,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGTGACATCAATTGGC,P0015_2,240110,Princeton +TGGAACAAGCCTCTCG-P0015_2,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-787,Marmoset-787,CL:0000003,P0015_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_B8,486,12,1218,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_D3,373,7,184.4,BR_PXA_231212_1,SI-TT-B8_i7,SI-TT-B8_b(i5),SI-NA-D3,27738,7376,0.0189942326396704,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGAACAAGCCTCTCG,P0015_2,240110,Princeton +ACGTTGTAGGCAGGTG-P0015_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1514,Marmoset-1514,CL:0000003,P0015_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_B8,486,12,1218,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_D3,373,7,184.4,BR_PXA_231212_1,SI-TT-B8_i7,SI-TT-B8_b(i5),SI-NA-D3,17876,6145,0.0003910269297193,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACGTTGTAGGCAGGTG,P0015_2,240110,Princeton +ATCAATCCAGCTTAGC-P0015_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1520,Marmoset-1520,CL:0000003,P0015_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_B8,486,12,1218,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_D3,373,7,184.4,BR_PXA_231212_1,SI-TT-B8_i7,SI-TT-B8_b(i5),SI-NA-D3,20881,6338,0.176234260201454,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCAATCCAGCTTAGC,P0015_2,240110,Princeton +CAGGTTTAGGCTATGT-P0015_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1408,Marmoset-1408,CL:0000003,P0015_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231117,LPLCXR_231117_1,LPLCXR_231117_1_B8,486,12,1218,BR_PXR_231212_1,231117,LPLCXA_231117_1,LPLCXA_231117_1_D3,373,7,184.4,BR_PXA_231212_1,SI-TT-B8_i7,SI-TT-B8_b(i5),SI-NA-D3,31448,6112,0.158928051590919,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CAGGTTTAGGCTATGT,P0015_2,240110,Princeton +CTTTCTTGTAATCCCT-P0018_1,Subpallium GABA,F M GABA,SN PAX7 GABA,SN SEMA5A GABA,Marmoset-1426,Marmoset-1426,CL:0000003,P0018_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_C8,623,11,563.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_E3,391,7,435.4,BR_PXA_231212_1,SI-TT-C8_i7,SI-TT-C8_b(i5),SI-NA-E3,18130,4492,0.106041416525841,Callithrix jacchus,CS20250428_GROUP_0034,Interneuron,,SN|SEMA5A|GABA,45,,,,,#3604fb,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTTCTTGTAATCCCT,P0018_1,240110,Princeton +TGCTCACTCATCCTCA-P0018_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-514,Marmoset-514,CL:0000003,P0018_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_C8,623,11,563.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_E3,391,7,435.4,BR_PXA_231212_1,SI-TT-C8_i7,SI-TT-C8_b(i5),SI-NA-E3,9099,3461,0.32108274102211,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TGCTCACTCATCCTCA,P0018_1,240110,Princeton +TCATACTTCATCGTTT-P0018_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-509,Marmoset-509,CL:0000003,P0018_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_C8,623,11,563.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_E3,391,7,435.4,BR_PXA_231212_1,SI-TT-C8_i7,SI-TT-C8_b(i5),SI-NA-E3,8896,3272,0.397946685552597,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCATACTTCATCGTTT,P0018_1,240110,Princeton +TAGCCTTGTAGCCTCC-P0018_1,Subpallium GABA,F M GABA,SN PAX7 GABA,SN SEMA5A GABA,Marmoset-1423,Marmoset-1423,CL:0000003,P0018_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_C8,623,11,563.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_E3,391,7,435.4,BR_PXA_231212_1,SI-TT-C8_i7,SI-TT-C8_b(i5),SI-NA-E3,8815,3448,0.303911328315735,Callithrix jacchus,CS20250428_GROUP_0034,Interneuron,,SN|SEMA5A|GABA,45,,,,,#3604fb,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TAGCCTTGTAGCCTCC,P0018_1,240110,Princeton +CTCTGTTCATCACAGC-P0018_1,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-519,Marmoset-519,CL:0000003,P0018_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_C8,623,11,563.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_E3,391,7,435.4,BR_PXA_231212_1,SI-TT-C8_i7,SI-TT-C8_b(i5),SI-NA-E3,7486,3406,0.507539749145508,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,CTCTGTTCATCACAGC,P0018_1,240110,Princeton +GGCCTTCGTCAGGAAG-P0018_1,Subpallium GABA,F M GABA,SN PAX7 GABA,SN EBF2 GABA,Marmoset-1424,Marmoset-1424,CL:0000003,P0018_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_C8,623,11,563.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_E3,391,7,435.4,BR_PXA_231212_1,SI-TT-C8_i7,SI-TT-C8_b(i5),SI-NA-E3,6300,2939,0.0315993018448353,Callithrix jacchus,CS20250428_GROUP_0030,Interneuron,,SN|EBF2|GABA,44,,,,,#c8df45,,CS20250428_SUBCL_0026,,SN|PAX7|GABA,28,#720a7d,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GGCCTTCGTCAGGAAG,P0018_1,240110,Princeton +CCTCCTCTCTCACAAA-P0018_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1395,Marmoset-1395,CL:0000003,P0018_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_D8,543,13,878.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_F3,378,7,252.62,BR_PXA_231212_1,SI-TT-D8_i7,SI-TT-D8_b(i5),SI-NA-F3,43513,7295,1.44400491990382e-05,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CCTCCTCTCTCACAAA,P0018_2,240110,Princeton +GTTGTTGCACATAGCC-P0018_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1358,Marmoset-1358,CL:0000003,P0018_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_D8,543,13,878.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_F3,378,7,252.62,BR_PXA_231212_1,SI-TT-D8_i7,SI-TT-D8_b(i5),SI-NA-F3,26534,6349,0.0006268507568165,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTTGTTGCACATAGCC,P0018_2,240110,Princeton +ATTCGTTTCCTCCCTC-P0018_2,Nonneuron,Immune,Microglia,Microglia,Marmoset-711,Marmoset-711,CL:0000003,P0018_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231206,LPLCXR_231206_1,LPLCXR_231206_1_D8,543,13,878.5,BR_PXR_231212_1,231206,LPRNXA_231206_1,LPRNXA_231206_1_F3,378,7,252.62,BR_PXA_231212_1,SI-TT-D8_i7,SI-TT-D8_b(i5),SI-NA-F3,2851,1661,0.0005595162510871,Callithrix jacchus,CS20250428_GROUP_0019,Nonneuron,CL:0000129,Microglia,4,Yao et al. 2023,,,,#cbfc1e,,CS20250428_SUBCL_0019,CL:0000129,Microglia,3,#761646,,CS20250428_CLASS_0008,CL:0000842,Immune,2,#aa6dec,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ATTCGTTTCCTCCCTC,P0018_2,240110,Princeton +TGACTCCTCTTAGCCC-P0019_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1415,Marmoset-1415,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,31433,7036,0.466278940439224,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGACTCCTCTTAGCCC,P0019_2,240110,Princeton +ATGCGATTCCTCGATC-P0019_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1416,Marmoset-1416,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,30807,5927,0.0029586369637399,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATGCGATTCCTCGATC,P0019_2,240110,Princeton +CGAAATGAGGCTAGAA-P0019_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1401,Marmoset-1401,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,21805,5643,0.0008381267543882,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGAAATGAGGCTAGAA,P0019_2,240110,Princeton +TCTTGACGTGTCACGG-P0019_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1400,Marmoset-1400,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,17016,5339,0.00247488101013,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCTTGACGTGTCACGG,P0019_2,240110,Princeton +GTCCTCCCAATAAGCA-P0019_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRv D1 MSN,Marmoset-119,Marmoset-119,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,15771,4412,0.0001815459690988,Callithrix jacchus,CS20250428_GROUP_0056,LGE,CL:4030051,STRv|D1 MSN,51,He et al. 2021,D1-Shell/OT,,ARHGAP6,#339933,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GTCCTCCCAATAAGCA,P0019_2,240110,Princeton +TCGTAATCACATGCTA-P0019_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1517,Marmoset-1517,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,14035,4916,0.001521740341559,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCGTAATCACATGCTA,P0019_2,240110,Princeton +CACATAATCTAACCAA-P0019_2,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1518,Marmoset-1518,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,13040,4597,0.200483530759811,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CACATAATCTAACCAA,P0019_2,240110,Princeton +AACAGATAGTTACTTC-P0019_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-121,Marmoset-121,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,11308,3979,0.0001843201898736,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AACAGATAGTTACTTC,P0019_2,240110,Princeton +GGTCCATCAATAATCC-P0019_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-674,Marmoset-674,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,8417,3498,0.0005672248662449,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGTCCATCAATAATCC,P0019_2,240110,Princeton +GTTGCTGAGGTCGAGG-P0019_2,Nonneuron,Astro-Epen,Ependymal,Ependymal,Marmoset-665,Marmoset-665,CL:0000003,P0019_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_F8,453,14,88.31,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_H3,401,8,280.0,BR_PXA_231212_1,SI-TT-F8_i7,SI-TT-F8_b(i5),SI-NA-H3,7046,3891,0.366389691829681,Callithrix jacchus,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTGCTGAGGTCGAGG,P0019_2,240110,Princeton +ACCCAACCATGACTAT-P0019_4,Subpallium GABA,CN CGE GABA,CN VIP GABA,VIP GABA,Marmoset-338,Marmoset-338,CL:0000003,P0019_4,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_H8,379,14,83.69,BR_PXR_231212_1,231211,LPRNXR_231211_1,LPRNXA_231211_1_B4,412,8,476.0,BR_PXA_231212_1,SI-TT-H8_i7,SI-TT-H8_b(i5),SI-NA-B4,17454,4781,0.0007299250573851,Callithrix jacchus,CS20250428_GROUP_0047,Interneuron,Need to Create a PR,VIP|GABA,37,Krienen et al. 2020,VIP,,VIP,#fc2b80,,CS20250428_SUBCL_0009,,CN|VIP|GABA,24,#1bc06a,,CS20250428_CLASS_0001,,CN|CGE|GABA,8,#26e8bb,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAACCATGACTAT,P0019_4,240110,Princeton +CTTATGTTCCTAGTCC-P0020_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1505,Marmoset-1505,CL:0000003,P0020_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_A9,389,14,109.38,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_C4,396,8,342.0,BR_PXA_240220_1,SI-TT-A9_i7,SI-TT-A9_b(i5),SI-NA-C4,75370,9910,0.0007608250016346,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTTATGTTCCTAGTCC,P0020_1,240307,Princeton +TAACCTAAGGCAATAG-P0020_1,Glut Sero Dopa,F M Glut,F Glut,STH PVALB-PITX2 Glut,Marmoset-1481,Marmoset-1481,CL:0000003,P0020_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_A9,389,14,109.38,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_C4,396,8,342.0,BR_PXA_240220_1,SI-TT-A9_i7,SI-TT-A9_b(i5),SI-NA-C4,62334,9115,0.0011282563209533,Callithrix jacchus,CS20250428_GROUP_0038,Interneuron,,STH|PVALB|PITX2|Glut,18,Yao et al. 2023,,,,#f57e20,,CS20250428_SUBCL_0013,PR 2771,F|Glut,14,#39e1e2,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TAACCTAAGGCAATAG,P0020_1,240307,Princeton +ATTATGGTCACTCAAA-P0020_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1402,Marmoset-1402,CL:0000003,P0020_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_A9,389,14,109.38,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_C4,396,8,342.0,BR_PXA_240220_1,SI-TT-A9_i7,SI-TT-A9_b(i5),SI-NA-C4,48003,8344,0.0114432545378804,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATTATGGTCACTCAAA,P0020_1,240307,Princeton +TACGCTTGTTGGTTGA-P0020_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1519,Marmoset-1519,CL:0000003,P0020_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_A9,389,14,109.38,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_C4,396,8,342.0,BR_PXA_240220_1,SI-TT-A9_i7,SI-TT-A9_b(i5),SI-NA-C4,33902,7217,0.002562909387052,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TACGCTTGTTGGTTGA,P0020_1,240307,Princeton +AGAGAAGCATAATCCG-P0020_2,Subpallium GABA,F M GABA,CN ONECUT1 GABA,GPi Core,Marmoset-1493,Marmoset-1493,CL:0000003,P0020_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_B9,406,14,90.58,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_D4,399,8,410.0,BR_PXA_240220_1,SI-TT-B9_i7,SI-TT-B9_b(i5),SI-NA-D4,79321,10349,0.0297908335924149,Callithrix jacchus,CS20250428_GROUP_0015,Interneuron,,GPi Core,40,Wallace et al. 2017,GPi Core,,,#d3489a,,CS20250428_SUBCL_0007,,CN|ONECUT1|GABA,26,#967be5,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGAGAAGCATAATCCG,P0020_2,240307,Princeton +AAGTTAGCAAGTGTCC-P0020_2,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1405,Marmoset-1405,CL:0000003,P0020_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_B9,406,14,90.58,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_D4,399,8,410.0,BR_PXA_240220_1,SI-TT-B9_i7,SI-TT-B9_b(i5),SI-NA-D4,13128,5003,0.0106309782713652,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AAGTTAGCAAGTGTCC,P0020_2,240307,Princeton +GGCTTCAAGGCGCTTA-P0020_2,Nonneuron,Astro-Epen,Astrocyte,Astrocyte,Marmoset-513,Marmoset-513,CL:0000003,P0020_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,231211,LPRNXR_231211_1,LPRNXR_231211_1_B9,406,14,90.58,BR_PXR_240124_1,231211,LPRNXA_231211_1,LPRNXA_231211_1_D4,399,8,410.0,BR_PXA_240220_1,SI-TT-B9_i7,SI-TT-B9_b(i5),SI-NA-D4,5542,2643,0.0027849492616951,Callithrix jacchus,CS20250428_GROUP_0039,Nonneuron,CL:0000127,Astrocyte,1,Yao et al. 2023,,,,#e16c95,,CS20250428_SUBCL_0000,CL:0000127,Astrocyte,1,#604f15,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGCTTCAAGGCGCTTA,P0020_2,240307,Princeton +ACCTAAATCGTTACAA-P0021_4,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-1155,Marmoset-1155,CL:0000003,P0021_4,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240109,LPRNXR_240109_1,LPRNXR_240109_1_F9,368,15,659.4,BR_PXR_240124_1,240109,LPLCXA_240109_1,LPLCXA_240109_1_H4,386,7,386.0,BR_PXA_240220_1,SI-TT-F9_i7,SI-TT-F9_b(i5),SI-NA-H4,29609,7083,0.443229705095291,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACCTAAATCGTTACAA,P0021_4,240307,Princeton +GGCTAGTGTCCTTTAA-P0022_1,Nonneuron,Astro-Epen,Ependymal,Ependymal,Marmoset-671,Marmoset-671,CL:0000003,P0022_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240112,LPRNXR_240112_1,LPRNXR_240112_1_G9,823,13,416.85,BR_PXR_240124_1,240126,LPLCXA_240126_1,LPLCXA_240126_1_A6,434,7,140.2,BR_PXA_240220_1,SI-TT-G9_i7,SI-TT-G9_b(i5),SI-NA-A6,3862,2177,0.485080361366272,Callithrix jacchus,CS20250428_GROUP_0012,Nonneuron,CL:0000065,Ependymal,3,Yao et al. 2023,,,,#c96e0a,,CS20250428_SUBCL_0012,CL:0000065,Ependymal,2,#7f207a,,CS20250428_CLASS_0000,CL:0000125,Astro|Epen,1,#6ec0da,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GGCTAGTGTCCTTTAA,P0022_1,240307,Princeton +CTAGCGGGTTACCGGG-P0022_2,Subpallium GABA,CN LGE GABA,STR D1 MSN,STRd D1 Matrix MSN,Marmoset-84,Marmoset-84,CL:0000003,P0022_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240112,LPRNXR_240112_1,LPRNXR_240112_1_H9,767,13,854.7,BR_PXR_240124_1,240126,LPLCXA_240126_1,LPLCXA_240126_1_B6,440,7,278.0,BR_PXA_240220_1,SI-TT-H9_i7,SI-TT-H9_b(i5),SI-NA-B6,37267,6520,9.85021033557132e-05,Callithrix jacchus,CS20250428_GROUP_0049,LGE,CL:4030043,STRd|D1 Matrix MSN,50,He et al. 2021,D1-Matrix,,STXBP6,#1f77b4,,CS20250428_SUBCL_0028,CL:4023026,STR|D1 MSN,31,#1655f2,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTAGCGGGTTACCGGG,P0022_2,240307,Princeton +TGACTCCTCTTGCTAT-P0023_1,Subpallium GABA,CN LGE GABA,STR Hybrid MSN,STR D1D2 Hybrid MSN,Marmoset-234,Marmoset-234,CL:0000003,P0023_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_C10,606,14,389,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_A5,388,8,316.0,BR_PXA_240227_1,SI-TT-C10_i7,SI-TT-C10_b(i5),SI-NA-A5,74195,8636,0.832674384117126,Callithrix jacchus,CS20250428_GROUP_0051,LGE,CL:4030050,STR|D1D2 Hybrid MSN,58,He et al. 2021,D1/D2 Hybrid,,"CRHR2, GRIK1",#9467bd,,CS20250428_SUBCL_0030,CL:4030050,STR|Hybrid MSN,33,#79bdf4,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGACTCCTCTTGCTAT,P0023_1,240323,Princeton +TCATACTTCGGTTACG-P0023_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe SOX6-CTXND1 GABA,Marmoset-776,Marmoset-776,CL:0000003,P0023_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_C10,606,14,389,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_A5,388,8,316.0,BR_PXA_240227_1,SI-TT-C10_i7,SI-TT-C10_b(i5),SI-NA-A5,28424,7092,0.0093009350821375,Callithrix jacchus,CS20250428_GROUP_0014,Interneuron,,GPe|SOX6|CTXND1|GABA,38,,,,"SOX6, KCNA1",#e9dc4d,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TCATACTTCGGTTACG,P0023_1,240323,Princeton +CATCCCAGTTAGGACC-P0023_1,Subpallium GABA,CN LGE GABA,STR D2 MSN,STRv D2 MSN,Marmoset-995,Marmoset-995,CL:0000003,P0023_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_C10,606,14,389,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_A5,388,8,316.0,BR_PXA_240227_1,SI-TT-C10_i7,SI-TT-C10_b(i5),SI-NA-A5,24769,5788,0.0107297208160162,Callithrix jacchus,CS20250428_GROUP_0058,LGE,CL:4030052,STRv|D2 MSN,54,He et al. 2021,D2-Shell/OT,,ARHGAP6,#98df8a,,CS20250428_SUBCL_0029,CL:4023029,STR|D2 MSN,32,#253c8c,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CATCCCAGTTAGGACC,P0023_1,240323,Princeton +AGATGCTTCATCCTCA-P0023_3,Subpallium GABA,CN LGE GABA,CN MEIS2 GABA,GPe MEIS2-SOX6 GABA,Marmoset-543,Marmoset-543,CL:0000003,P0023_3,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_E10,652,14,861,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_C5,372,8,728.0,BR_PXA_240227_1,SI-TT-E10_i7,SI-TT-E10_b(i5),SI-NA-C5,12650,4780,0.0007240314735099,Callithrix jacchus,CS20250428_GROUP_0013,LGE,,GPe|MEIS2|SOX6|GABA,49,,,,,#937a2e,,CS20250428_SUBCL_0006,,CN|MEIS2|GABA,30,#d8f378,,CS20250428_CLASS_0003,,CN|LGE|GABA,10,#d0b83c,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGATGCTTCATCCTCA,P0023_3,240323,Princeton +GAGTGATCATCACAGC-P0023_3,Subpallium GABA,CN MGE GABA,STR RSPO2 GABA,STR SST-RSPO2 GABA,Marmoset-943,Marmoset-943,CL:0000003,P0023_3,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_E10,652,14,861,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_C5,372,8,728.0,BR_PXA_240227_1,SI-TT-E10_i7,SI-TT-E10_b(i5),SI-NA-C5,8513,3443,0.0017423350363969,Callithrix jacchus,CS20250428_GROUP_0044,Interneuron,,STR|SST|RSPO2|GABA,31,,,,,#7f7f7f,,CS20250428_SUBCL_0031,,STR|RSPO2|GABA,21,#5b0e63,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,GAGTGATCATCACAGC,P0023_3,240323,Princeton +CGATTTGCATAATGAG-P0024_2,Subpallium GABA,CN MGE GABA,CN ST18 GABA,STR FS PTHLH-PVALB GABA,Marmoset-150,Marmoset-150,CL:0000003,P0024_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_H10,582,14,2076,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_F5,389,8,1094.0,BR_PXA_240227_1,SI-TT-H10_i7,SI-TT-H10_b(i5),SI-NA-F5,11949,4920,0.162146091461182,Callithrix jacchus,CS20250428_GROUP_0040,Interneuron,CL:4042023,STR|FS|PTHLH|PVALB|GABA,28,Muñoz-Manchado et al. 2018,Pvalb Pthlh | FS,,"ST18, PTHLH, COL19A1",#800000,,CS20250428_SUBCL_0008,,CN|ST18|GABA,18,#5fd989,,CS20250428_CLASS_0005,,CN|MGE|GABA,7,#ce4c27,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CGATTTGCATAATGAG,P0024_2,240323,Princeton +GTTTAACCAGCAATAA-P0025_1,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-109,Marmoset-109,CL:0000003,P0025_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_A11,577,14,3286.5,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_G5,377,8,502.0,BR_PXA_240227_1,SI-TT-A11_i7,SI-TT-A11_b(i5),SI-NA-G5,85418,10137,0.0175348408520222,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,GTTTAACCAGCAATAA,P0025_1,240323,Princeton +CAGGAAGGTTGCTGGG-P0025_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1557,Marmoset-1557,CL:0000003,P0025_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_A11,577,14,3286.5,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_G5,377,8,502.0,BR_PXA_240227_1,SI-TT-A11_i7,SI-TT-A11_b(i5),SI-NA-G5,3303,2096,0.0008508177706971,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CAGGAAGGTTGCTGGG,P0025_1,240323,Princeton +ACCAAGTTCAGAAACG-P0025_2,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-110,Marmoset-110,CL:0000003,P0025_2,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240123,LPLCXR_240123_1,LPLCXR_240123_1_B11,575,14,2803.5,BR_PXR_240227_1,240123,LPLCXA_240123_1,LPLCXA_240123_1_H5,367,8,514.0,BR_PXA_240227_1,SI-TT-B11_i7,SI-TT-B11_b(i5),SI-NA-H5,72783,10319,0.0081345094367861,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,ACCAAGTTCAGAAACG,P0025_2,240323,Princeton +CTCATTTAGTCACCTC-P0028_1,Subpallium GABA,F M GABA,CN LHX8 GABA,GPe-NDB-SI LHX6-LHX8-GBX1 GABA,Marmoset-791,Marmoset-791,CL:0000003,P0028_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240215,LPRNXR_240215_1,LPRNXR_240215_1_B1,402,14,212,BR_PXR_240604_1,240216,LPRNXA_240216_1,LPRNXA_240216_1_A7,424,7,272.0,BR_PXA_240604_1,SI-TT-F11_i7,SI-TT-F11_b(i5),SI-NA-A7,43899,7747,0.0067592398263514,Callithrix jacchus,CS20250428_GROUP_0020,Interneuron,,GPe|NDB|SI|LHX6|LHX8|GBX1|GABA,39,,,,,#653614,,CS20250428_SUBCL_0005,,CN|LHX8|GABA,25,#caf28b,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,CTCATTTAGTCACCTC,P0028_1,240807,Princeton +GAAACCCGTATTACCC-P0030_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1346,Marmoset-1346,CL:0000003,P0030_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240214,LPLCXR_240214_1,LPLCXR_240214_1_A1,473,13,"1,113",BR_PXR_240604_1,240216,LPLCXA_240216_1,LPLCXA_240216_1_H6,400,7,312.0,BR_PXA_240604_1,SI-TT-A1_i7,SI-TT-A1_b(i5),SI-NA-H6,20440,6008,0.0002349184505874,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GAAACCCGTATTACCC,P0030_1,240807,Princeton +TCCCTCACAAACAACA-P0031_1,Nonneuron,OPC-Oligo,Oligodendrocyte,ImOligo,Marmoset-102,Marmoset-102,CL:0000003,P0031_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240403,LPRNXR_240403_1,LPRNXR_240403_1_D2,406,18,909.3,BR_PXR_240604_1,240404,LPRNXA_240404_1,LPRNXA_240404_1_H7,430,9,97.6,BR_PXA_240604_1,SI-TT-D2_i7,SI-TT-D2_b(i5),SI-NA-H7,24048,7136,0.440533727407455,Callithrix jacchus,CS20250428_GROUP_0018,Nonneuron,CL:4042031,ImOligo,11,Jäkel et al. 2019,,,,#711c24,,CS20250428_SUBCL_0022,CL:0000128,Oligodendrocyte,7,#def476,,CS20250428_CLASS_0010,CL:0000095,OPC|Oligo,3,#8605d4,,CS20250428_NEIGH_0001,CL:0000000,Nonneuron,1,#f2ca7d,,TCCCTCACAAACAACA,P0031_1,240807,Princeton +ACCCAGGGTTGAAGCC-P0032_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1352,Marmoset-1352,CL:0000003,P0032_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240325,LPLCXR_240325_1,LPLCXR_240325_1_H1,384,14,574,BR_PXR_240604_1,240321,LPLCXA_240325_1,LPLCXA_240325_1_C7,345,6,44.9,BR_PXA_240604_1,SI-TT-H1_i7,SI-TT-H1_b(i5),SI-NA-C7,16727,5420,0.0248151179403067,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ACCCAGGGTTGAAGCC,P0032_1,240807,Princeton +AGTAGCTTCTTAGTCT-P0034_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1406,Marmoset-1406,CL:0000003,P0034_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240401,LPRNXR_240401_1,LPRNXR_240401_1_B2,789,16,4550,BR_PXR_240604_1,240402,LPRNXA_240402_1,LPRNXA_240402_1_E7,407,9,149.8,BR_PXA_240604_1,SI_TT_B2_i7,SI_TT_B2_b(i5),SI-NA-E7,54615,8663,0.0077038258314132,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,AGTAGCTTCTTAGTCT,P0034_1,240807,Princeton +CTCCAACTCCTTGCAC-P0040_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1482,Marmoset-1482,CL:0000003,P0040_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240429,LPLCXR_240429_1,LPLCXR_240429_1_B3,569,16,1166,BR_PXR_240604_1,240424,LPLCXA_240424_1,LPLCXA_240424_1_E8,427,8,452.0,BR_PXA_240604_1,SI-TT-B3_i7,SI-TT-B3_b(i5),SI-NA-E8,49681,8410,0.0981632918119431,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTCCAACTCCTTGCAC,P0040_1,240807,Princeton +CCACAATAGTACTGGT-P0040_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1472,Marmoset-1472,CL:0000003,P0040_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240429,LPLCXR_240429_1,LPLCXR_240429_1_B3,569,16,1166,BR_PXR_240604_1,240424,LPLCXA_240424_1,LPLCXA_240424_1_E8,427,8,452.0,BR_PXA_240604_1,SI-TT-B3_i7,SI-TT-B3_b(i5),SI-NA-E8,48609,8157,0.0416872911155224,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CCACAATAGTACTGGT,P0040_1,240807,Princeton +TCTCAAGCACCATATG-P0043_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1532,Marmoset-1532,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,29285,6563,0.359262555837631,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,TCTCAAGCACCATATG,P0043_1,240807,Princeton +ATCGCCCGTTTGAGGC-P0043_1,Subpallium GABA,F M GABA,F GABA,ZI-HTH GABA,Marmoset-1510,Marmoset-1510,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,29202,6915,0.0012171412818133,Callithrix jacchus,CS20250428_GROUP_0063,Interneuron,,ZI|HTH|GABA,46,,,,,#c49c94,,CS20250428_SUBCL_0037,,F|GABA,29,#7ba2df,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,ATCGCCCGTTTGAGGC,P0043_1,240807,Princeton +TGGCCAATCTCACTCA-P0043_1,Subpallium GABA,F M GABA,F M GATA3 GABA,SN-VTR-HTH GATA3-TCF7L2 GABA,Marmoset-1412,Marmoset-1412,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,25063,5912,0.0002621588355395,Callithrix jacchus,CS20250428_GROUP_0037,Interneuron,,SN|VTR|HTH|GATA3|TCF7L2|GABA,43,,,,,#1dbfcf,,CS20250428_SUBCL_0016,,F|M|GATA3|GABA,27,#311a96,,CS20250428_CLASS_0006,,F|M|GABA,9,#cd0f13,,CS20250428_NEIGH_0002,,Subpallium|GABA,3,#19613b,,TGGCCAATCTCACTCA,P0043_1,240807,Princeton +GCTATAGGTCCCGAAG-P0043_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1559,Marmoset-1559,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,23509,5945,0.0003325360885355,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,GCTATAGGTCCCGAAG,P0043_1,240807,Princeton +CTCCAAACACTAAGAA-P0043_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1543,Marmoset-1543,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,21152,5885,0.0617481507360935,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTCCAAACACTAAGAA,P0043_1,240807,Princeton +CTATGATCAAACCTTG-P0043_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1560,Marmoset-1560,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,21048,5510,0.0001894081651698,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CTATGATCAAACCTTG,P0043_1,240807,Princeton +CAACTAGGTGCTCACC-P0043_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1558,Marmoset-1558,CL:0000003,P0043_1,cjNutmeg,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240508,LPLCXR_240508_1,LPLCXR_240508_1_H3,629,12,1449,BR_PXR_240604_1,240501,LPLCXA_240501_1,LPLCXA_240501_1_B9,436,8,504.0,BR_PXA_240604_1,SI-TT-H3_i7,SI-TT-H3_b(i5),SI-NA-B9,19941,5371,0.0001078425557352,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,CAACTAGGTGCTCACC,P0043_1,240807,Princeton +AAGCGAATCCCGTTTA-P0046_1,Glut Sero Dopa,M Dopa,M Dopa,SN-VTR CALB1 Dopa,Marmoset-1438,Marmoset-1438,CL:0000003,P0046_1,cjJellybean,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240611,LPLCXR_240611_1,LPLCXR_240611_1_F4,486,11,494,BR_PXR_240917_1,240607,LPLCXA_240607_1,LPLCXA_240607_1_G9,475,7,1408.0,BR_PXA_240917_1,SI-TT-F4_i7,SI-TT-F4_b(i5),SI-NA-G9,7958,3396,0.0002577549021225,Callithrix jacchus,CS20250428_GROUP_0029,Dopaminergic,CL:4042025,SN|VTR|CALB1|Dopa,22,Agarwal et al. 2020,,,"TH, CALB1, SLC6A3, NR4A2, BNC2",#854098,,CS20250428_SUBCL_0025,CL:4042025,M|Dopa,16,#77f0ca,,CS20250428_CLASS_0009,CL:2000097,M|Dopa,6,#0433b4,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AAGCGAATCCCGTTTA,P0046_1,241212,Princeton +AACATTGTCAAACCTA-P0062_1,Glut Sero Dopa,F M Glut,F M Glut,VTR-HTH Glut,Marmoset-1347,Marmoset-1347,CL:0000003,P0062_1,cjJellybean,10x multiome,EFO:0030059,Marmoset,NCBI:txid9483,Adult,Brain,Brain,unknown,unknown,unknown,unknown,unknown,unknown,normal,PATO:0000461,nucleus,True,240926,LPLCXR_240926_1,LPLCXR_240926_1_E10,529,13,431,BR_PXR_241204_1,240918,LPLCXA_240918_1,LPLCXA_240918_1_H02,391,7,290.0,BR_PXA_241204_1,SI-TT-E10_i7,SI-TT-E10_b(i5),SI-NA-H02,79294,9602,0.149991944432259,Callithrix jacchus,CS20250428_GROUP_0064,Interneuron,,VTR|HTH|Glut,21,,,,SLC17A6,#54621f,,CS20250428_SUBCL_0017,PR 2771,F|M|Glut,15,#66750b,,CS20250428_CLASS_0007,,F|M|Glut,5,#7d0f09,,CS20250428_NEIGH_0000,PR 2579,Glut|Sero|Dopa,2,#91f4bb,,AACATTGTCAAACCTA,P0062_1,250114,Princeton diff --git a/bkbit/data_translators/README.md b/bkbit/data_translators/README.md index 56db0e9..2c2dd47 100644 --- a/bkbit/data_translators/README.md +++ b/bkbit/data_translators/README.md @@ -202,4 +202,98 @@ gen-geneannotation 'https://ftp.ncbi.nlm.nih.gov/genomes/all/annotation_releases pip install bkbit gen-geneannotation -a 'GCF_003339765.1' 'https://ftp.ensembl.org/pub/release-104/gff3/macaca_mulatta/Macaca_mulatta.Mmul_10.104.gff3.gz' > output.jsonld +``` + +# ait_taxonomy_parser.py + +## Overview +`ait_taxonomy_parser` reads **Allen Institute Taxonomy (AIT)** files distributed in +`.h5ad` ([AnnData](https://anndata.readthedocs.io)) format — for example the BICAN / +HMBA basal-ganglia taxonomies produced with the +[`scrattch`](https://alleninstitute.github.io/scrattch/) toolkit — and extracts the +cell-type taxonomy into plain Python objects (pandas DataFrames) or a CSV. + +It reads **only** the small taxonomy/metadata groups and never loads the expression +matrix, so it works on multi-GB files and can read them directly from an +`https://` / `s3://` URL without downloading the whole file. + +## How the parser works + +An `.h5ad` file is really an **HDF5 container** — a tree of "groups" (folders): + +``` +X, layers, raw ← cell × gene expression matrices (this is ~all of the file size) +obs ← per-cell table (can be millions of rows) +var ← per-gene table +uns ← unstructured metadata ← the taxonomy lives here +obsm, obsp, ... ← embeddings, graphs +``` + +The taxonomy is a tiny fraction of the file, so the parser opens the container and +reaches into only the small groups — it never touches `X`. + +1. **Open the file (local or remote).** For a URL, `h5py` + `fsspec` read just the + HDF5 internal index and then fetch **only the specific byte ranges** for the + groups actually accessed, using HTTP range requests. That is why a 100+ GB file + can be "read" in seconds without downloading it — the bytes making up `X` are + never requested. Files are opened read-only; the parser never modifies them. + +2. **Read the taxonomy definition from `uns`.** + - `uns/hierarchy` is a small dict of level → position + (e.g. `Neighborhood:0, Class:1, Subclass:2, Group:3, cluster_id:4`), sorted to + give the level order from root to leaf. + - `uns/cluster_info` is the taxonomy table: one row per leaf cluster with its + full ancestor path plus per-level accessions, colors, and CL ontology IDs. + + Decoding is done with anndata's `read_elem`, which honors each group's + `encoding-type` attribute — e.g. reconstructing categorical columns (stored as + `categories` + integer `codes` in HDF5) back into real string values. + +3. **Read the rest of `uns`, plus `obs`/`var`.** `obs` is optional (`load_obs`) + because it is the one large metadata group; taxonomy work skips it by default. + +4. **Build in-memory views** (no further file access): ordered `levels`, the + `cluster_info` DataFrame, a `.edges()` view of parent→child tree edges, a + `.summary()` printout, and `.to_csv()` to persist the taxonomy table. + +## Dependencies +`anndata`, `h5py`, and (for remote URLs) `fsspec` + `aiohttp`. + +## Command Line +```python +python -m bkbit.data_translators.ait_taxonomy_parser PATH_OR_URL [OPTIONS] +``` + +#### Options +--no-obs
+ Skip the large per-cell `obs` table; read only the taxonomy definition +(`uns` + `cluster_info`). Recommended when reading remote files.
+ +--out CSV
+ Write the leaf-cluster taxonomy table (`cluster_info`) to this CSV path.
+ +## Examples +#### Example 1: Summarize a taxonomy from a remote URL (no download) +```python +python -m bkbit.data_translators.ait_taxonomy_parser \ + 'https://.../Marmoset_HMBA_basalganglia_AIT_pre-print.h5ad' --no-obs +``` + +#### Example 2: Export the taxonomy table to CSV +```python +python -m bkbit.data_translators.ait_taxonomy_parser \ + 'https://.../Human_HMBA_basalganglia_AIT_pre-print.h5ad' \ + --no-obs --out Human_taxonomy.csv +``` + +#### Example 3: Use as a library +```python +from bkbit.data_translators.ait_taxonomy_parser import AITTaxonomy + +tax = AITTaxonomy.from_file(path_or_url, load_obs=False) +print(tax.summary()) +tax.levels # ['Neighborhood', 'Class', 'Subclass', 'Group', 'cluster_id'] +tax.cluster_info # pandas DataFrame, one row per leaf cluster +tax.edges() # list of (parent_level, parent, child_level, child) tree edges +tax.to_csv('taxonomy.csv') ``` \ No newline at end of file diff --git a/bkbit/data_translators/ait_taxonomy_parser.py b/bkbit/data_translators/ait_taxonomy_parser.py new file mode 100644 index 0000000..f7839e4 --- /dev/null +++ b/bkbit/data_translators/ait_taxonomy_parser.py @@ -0,0 +1,223 @@ +"""Parser for Allen Institute Taxonomy (AIT) files in ``.h5ad`` (AnnData) format. + +AIT taxonomies (e.g. those produced by the ``scrattch`` toolkit and released for +the BICAN / HMBA project) are stored as `AnnData `_ +objects. The cell-by-gene expression matrix (``X``, ``layers``, ``raw``) makes up +essentially all of the file size (tens to >100 GB), while the *taxonomy* itself +lives in a handful of tiny groups: + +* ``uns/hierarchy`` - the ordered taxonomy levels (top -> leaf). +* ``uns/cluster_info``- one row per leaf cluster, with the full ancestor path plus + per-level accession, color, CL ontology id, tokens and + display order. +* ``uns/*`` scalars - taxonomy-level metadata (title, schema_version, ...). +* ``obs`` - per-cell assignments to each taxonomy level (categorical). + +This module reads **only** those metadata groups and never materializes ``X``, so +it works against multi-GB files - including reading them directly from an +``https://`` or ``s3://`` URL via HDF5 range requests (no full download). + +Example +------- +>>> from bkbit.data_translators.ait_taxonomy_parser import AITTaxonomy +>>> tax = AITTaxonomy.from_file( +... "https://.../Marmoset_HMBA_basalganglia_AIT_pre-print.h5ad") +>>> tax.title +'Marmoset_HMBA_basalganglia_consensus_AIT' +>>> tax.levels +['Neighborhood', 'Class', 'Subclass', 'Group', 'cluster_id'] +>>> tax.cluster_info.shape +(594, 80) +""" + +from __future__ import annotations + +import contextlib +from dataclasses import dataclass, field +from typing import Any, Iterator + +import h5py +import pandas as pd +from anndata.io import read_elem + +# Groups that hold the expression data - never read these when parsing taxonomy. +_MATRIX_GROUPS = ("X", "layers", "raw", "obsp", "varp", "varm") + + +def _open_h5(path: str) -> tuple[h5py.File, contextlib.ExitStack]: + """Open a local path or a remote (http/https/s3/gcs) URL as an ``h5py.File``. + + Remote files are opened lazily with :mod:`fsspec` so that only the byte + ranges actually accessed are fetched over the network. + """ + stack = contextlib.ExitStack() + if "://" in path and not path.startswith("file://"): + import fsspec + + protocol = path.split("://", 1)[0] + # A generous block size keeps the number of range requests low. + fileobj = fsspec.open(path, block_size=8 * 1024 * 1024).open() + stack.callback(fileobj.close) + _ = protocol # (kept for clarity / future protocol-specific handling) + h5 = h5py.File(fileobj, "r") + else: + h5 = h5py.File(path.replace("file://", ""), "r") + stack.callback(h5.close) + return h5, stack + + +def _scalar(value: Any) -> Any: + """Normalize an h5py-decoded scalar/array to a plain Python value.""" + if isinstance(value, bytes): + return value.decode() + if hasattr(value, "tolist"): + out = value.tolist() + if isinstance(out, list): + return [v.decode() if isinstance(v, bytes) else v for v in out] + return out + return value + + +@dataclass +class AITTaxonomy: + """Parsed contents of an AIT ``.h5ad`` taxonomy file (metadata only).""" + + title: str | None + levels: list[str] + """Taxonomy levels ordered from broadest (root) to finest (leaf).""" + cluster_info: pd.DataFrame + """One row per leaf cluster with the full ancestor path and per-level metadata.""" + obs: pd.DataFrame | None + """Per-cell annotations (taxonomy assignments + sample metadata).""" + var: pd.DataFrame | None + """Gene metadata.""" + uns: dict[str, Any] = field(default_factory=dict) + """Scalar / small unstructured metadata (title, schema_version, ...).""" + + # ---- constructors ------------------------------------------------------- + @classmethod + def from_file( + cls, + path: str, + *, + load_obs: bool = True, + load_var: bool = True, + ) -> "AITTaxonomy": + """Parse an AIT ``.h5ad`` file at a local path or remote URL. + + Parameters + ---------- + path: + Local filesystem path, or an ``https://`` / ``s3://`` / ``gs://`` URL. + load_obs: + Read the per-cell ``obs`` table. For files with millions of cells this + is the largest metadata group; set ``False`` to skip it and read only + the taxonomy definition (``uns`` + ``cluster_info``). + load_var: + Read the gene (``var``) table. + """ + h5, stack = _open_h5(path) + with stack: + uns_group = h5["uns"] + + # Ordered taxonomy levels from uns/hierarchy: {level_name: position}. + hierarchy = read_elem(uns_group["hierarchy"]) + levels = [name for name, _ in sorted(hierarchy.items(), key=lambda kv: int(kv[1]))] + + # cluster_info: the leaf-cluster taxonomy table. + cluster_info = read_elem(uns_group["cluster_info"]) + + # Remaining uns entries as scalars/small values (skip the two above). + uns: dict[str, Any] = {} + for key in uns_group.keys(): + if key in ("hierarchy", "cluster_info"): + continue + with contextlib.suppress(Exception): + uns[key] = _scalar(read_elem(uns_group[key])) + + obs = read_elem(h5["obs"]) if load_obs else None + var = read_elem(h5["var"]) if load_var else None + + title = _scalar(uns.get("title")) + + return cls( + title=title, + levels=levels, + cluster_info=cluster_info, + obs=obs, + var=var, + uns=uns, + ) + + # ---- taxonomy views ----------------------------------------------------- + def level_categories(self, level: str) -> list[str]: + """Unique node names at a taxonomy ``level`` (in cluster_info order).""" + col = "Cluster" if level == "cluster_id" and "Cluster" in self.cluster_info else level + return list(pd.unique(self.cluster_info[col].astype(str))) + + def iter_leaves(self) -> Iterator[dict[str, Any]]: + """Yield each leaf cluster row of ``cluster_info`` as a plain dict.""" + for _, row in self.cluster_info.iterrows(): + yield row.to_dict() + + def edges(self) -> list[tuple[str, str, str, str]]: + """Parent/child edges of the taxonomy tree. + + Returns tuples ``(parent_level, parent_name, child_level, child_name)`` + derived from the per-cluster ancestor path in ``cluster_info``. + """ + seen: set[tuple[str, str, str, str]] = set() + edges: list[tuple[str, str, str, str]] = [] + cols = [("Cluster" if lvl == "cluster_id" else lvl) for lvl in self.levels] + cols = [c for c in cols if c in self.cluster_info.columns] + for _, row in self.cluster_info.iterrows(): + for (pl, pc), (cl, cc) in zip(zip(self.levels, cols), zip(self.levels[1:], cols[1:])): + edge = (pl, str(row[pc]), cl, str(row[cc])) + if edge not in seen: + seen.add(edge) + edges.append(edge) + return edges + + def to_csv(self, path: str) -> str: + """Write the leaf-cluster taxonomy table (``cluster_info``) to ``path``.""" + self.cluster_info.to_csv(path, index=True, index_label="cell_label") + return path + + def summary(self) -> str: + """Human-readable one-block summary of the taxonomy.""" + lines = [ + f"title: {self.title}", + f"schema_version: {self.uns.get('schema_version')}", + f"reference_genome:{self.uns.get('reference_genome')}", + f"levels: {' > '.join(self.levels)}", + f"leaf clusters: {len(self.cluster_info)}", + ] + for lvl in self.levels: + with contextlib.suppress(Exception): + lines.append(f" {lvl:<14} {len(self.level_categories(lvl))} nodes") + if self.obs is not None: + lines.append(f"cells (obs): {len(self.obs):,}") + if self.var is not None: + lines.append(f"genes (var): {len(self.var):,}") + return "\n".join(lines) + + +def parse_ait(path: str, **kwargs: Any) -> AITTaxonomy: + """Convenience wrapper around :meth:`AITTaxonomy.from_file`.""" + return AITTaxonomy.from_file(path, **kwargs) + + +if __name__ == "__main__": + import argparse + + ap = argparse.ArgumentParser(description="Parse an AIT .h5ad taxonomy file.") + ap.add_argument("path", help="Local path or http(s)/s3 URL to the .h5ad file") + ap.add_argument("--no-obs", action="store_true", help="Skip the per-cell obs table") + ap.add_argument("--out", metavar="CSV", help="Write the cluster_info taxonomy table to this CSV path") + args = ap.parse_args() + + tax = AITTaxonomy.from_file(args.path, load_obs=not args.no_obs) + print(tax.summary()) + if args.out: + tax.to_csv(args.out) + print(f"\nwrote {len(tax.cluster_info)} clusters x {tax.cluster_info.shape[1]} cols -> {args.out}") diff --git a/bkbit/data_translators/parse_ait_taxonomy.ipynb b/bkbit/data_translators/parse_ait_taxonomy.ipynb new file mode 100644 index 0000000..2ba1c7b --- /dev/null +++ b/bkbit/data_translators/parse_ait_taxonomy.ipynb @@ -0,0 +1,886 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "# Parsing Allen Institute Taxonomy (AIT) `.h5ad` files\n", + "\n", + "This notebook walks through parsing AIT taxonomy files (BICAN / HMBA basal-ganglia,\n", + "produced with the [`scrattch`](https://alleninstitute.github.io/scrattch/) toolkit)\n", + "step by step. It mirrors `bkbit/data_translators/ait_taxonomy_parser.py`.\n", + "\n", + "**Key idea:** an `.h5ad` file is an HDF5 container. The taxonomy lives in the tiny\n", + "`uns` group; the expression matrix `X` is what makes the files huge (30–105 GB).\n", + "We read **only** the taxonomy groups — over HTTP range requests — so nothing is\n", + "downloaded in full and `X` is never loaded." + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## 1. Install dependencies\n", + "`anndata` + `h5py` to read HDF5, `fsspec` + `aiohttp` for lazy remote reads." + ] + }, + { + "cell_type": "code", + "execution_count": 1, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "Requirement already satisfied: anndata in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (0.13.2)\n", + "Requirement already satisfied: h5py in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (3.16.0)\n", + "Requirement already satisfied: fsspec in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (2026.6.0)\n", + "Requirement already satisfied: aiohttp in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (3.14.1)\n", + "Requirement already satisfied: pandas in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (3.0.3)\n", + "Requirement already satisfied: array-api-compat>=1.7.1 in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from anndata) (1.15.0)\n", + "Requirement already satisfied: legacy-api-wrap in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from anndata) (1.5)\n", + "Requirement already satisfied: natsort in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from anndata) (8.4.0)\n", + "Requirement already satisfied: numpy>=2.1 in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from anndata) (2.2.4)\n", + "Requirement already satisfied: packaging>=24.2 in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from anndata) (24.2)\n", + "Requirement already satisfied: scipy!=1.17.0,>=1.14 in 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/Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from pydantic-settings->scverse-misc[settings]>=0.1.0->anndata) (2.11.3)\n", + "Requirement already satisfied: typing-inspection>=0.4.0 in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from pydantic-settings->scverse-misc[settings]>=0.1.0->anndata) (0.4.0)\n", + "Requirement already satisfied: annotated-types>=0.6.0 in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from pydantic>=2.7.0->pydantic-settings->scverse-misc[settings]>=0.1.0->anndata) (0.7.0)\n", + "Requirement already satisfied: pydantic-core==2.33.1 in /Users/pujatrivedi/Desktop/MIT/test_bkbit_20241127/bkbit/.venv/lib/python3.12/site-packages (from pydantic>=2.7.0->pydantic-settings->scverse-misc[settings]>=0.1.0->anndata) (2.33.1)\n", + "\n", + "\u001b[1m[\u001b[0m\u001b[34;49mnotice\u001b[0m\u001b[1;39;49m]\u001b[0m\u001b[39;49m A new release of pip is available: \u001b[0m\u001b[31;49m24.0\u001b[0m\u001b[39;49m -> \u001b[0m\u001b[32;49m26.1.2\u001b[0m\n", + "\u001b[1m[\u001b[0m\u001b[34;49mnotice\u001b[0m\u001b[1;39;49m]\u001b[0m\u001b[39;49m To update, run: \u001b[0m\u001b[32;49mpip install --upgrade pip\u001b[0m\n", + "Note: you may need to restart the kernel to use updated packages.\n" + ] + } + ], + "source": [ + "%pip install anndata h5py fsspec aiohttp pandas" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## 2. Imports and file URLs" + ] + }, + { + "cell_type": "code", + "execution_count": 45, + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + "'https://released-taxonomies-802451596237-us-west-2.s3.us-west-2.amazonaws.com/HMBA/BasalGanglia/BICAN_05072025_pre-print_release/Human_HMBA_basalganglia_AIT_pre-print.h5ad'" + ] + }, + "execution_count": 45, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "import fsspec\n", + "import h5py\n", + "import pandas as pd\n", + "from anndata.io import read_elem\n", + "\n", + "BASE = (\n", + " \"https://released-taxonomies-802451596237-us-west-2.s3.us-west-2.amazonaws.com\"\n", + " \"/HMBA/BasalGanglia/BICAN_05072025_pre-print_release\"\n", + ")\n", + "URLS = {\n", + " \"Human\": f\"{BASE}/Human_HMBA_basalganglia_AIT_pre-print.h5ad\",\n", + " \"Macaque\": f\"{BASE}/Macaque_HMBA_basalganglia_AIT_pre-print.h5ad\",\n", + " \"Marmoset\": f\"{BASE}/Marmoset_HMBA_basalganglia_AIT_pre-print.h5ad\",\n", + "}\n", + "\n", + "# Pick one to explore. Marmoset is the smallest (~30 GB); we still never download it.\n", + "SPECIES = \"Human\"\n", + "url = URLS[SPECIES]\n", + "url" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## 3. Open the remote file lazily (no download)\n", + "`fsspec` opens the URL as a file-like object backed by HTTP range requests. `h5py`\n", + "reads only the HDF5 index; group data is fetched on demand when accessed." + ] + }, + { + "cell_type": "code", + "execution_count": 46, + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + "['X', 'layers', 'obs', 'obsm', 'obsp', 'raw', 'uns', 'var', 'varm', 'varp']" + ] + }, + "execution_count": 46, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "fileobj = fsspec.open(url, block_size=8 * 1024 * 1024).open()\n", + "h5 = h5py.File(fileobj, \"r\")\n", + "\n", + "# Top-level groups. X / layers / raw are the big expression matrices — we ignore them.\n", + "list(h5.keys())" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## 4. Explore the `uns` group (where the taxonomy lives)" + ] + }, + { + "cell_type": "code", + "execution_count": 47, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "AIT117_MapMyCells_Flat_Subclass_label_colors: shape=(28,) dtype=object\n", + "AIT117_MapMyCells_Group_label_colors: shape=(48,) dtype=object\n", + "AIT117_MapMyCells_Subclass_label_colors: shape=(28,) dtype=object\n", + "AIT193_MapMyCells_Flat_Subclass_label_colors: shape=(33,) dtype=object\n", + "AIT193_MapMyCells_Neighborhood_label_colors: shape=(4,) dtype=object\n", + "AIT193_MapMyCells_Subclass_label_colors: shape=(33,) dtype=object\n", + "batch_condition: shape=(1,) dtype=object\n", + "cluster_algorithm: shape=() dtype=object\n", + "cluster_info/ (group) -> ['CL:ID_class', 'CL:ID_group', 'CL:ID_neighborhood', 'CL:ID_subclass', 'Class', 'Cluster', 'Group', 'Neighborhood']\n", + "dataset_purl: shape=() dtype=object\n", + "default_embedding: shape=() dtype=object\n", + "filter/ (group) -> ['standard']\n", + "gene_annotation_version: shape=() dtype=object\n", + "hierarchy/ (group) -> ['Class', 'Group', 'Neighborhood', 'Subclass', 'cluster_id']\n", + "hvg/ (group) -> ['flavor']\n", + "leiden_scVI/ (group) -> ['params']\n", + "log1p/ (group) -> []\n", + "mode: shape=() dtype=object\n", + "neighbors/ (group) -> ['connectivities_key', 'distances_key', 'params']\n", + "qc_constraints/ (group) -> ['doublet_score', 'pct_counts_mt']\n", + "qc_filtered/ (group) -> ['doublet_score', 'pct_counts_mt']\n", + "reference_genome: shape=() dtype=object\n", + "schema_version: shape=() dtype=object\n", + "title: shape=() dtype=object\n", + "umap/ (group) -> ['params']\n" + ] + } + ], + "source": [ + "for k in h5[\"uns\"].keys():\n", + " obj = h5[\"uns\"][k]\n", + " if isinstance(obj, h5py.Group):\n", + " print(f\"{k}/ (group) -> {list(obj.keys())[:8]}\")\n", + " else:\n", + " print(f\"{k}: shape={obj.shape} dtype={obj.dtype}\")" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### 4a. Taxonomy levels from `uns/hierarchy`\n", + "A dict of `level -> position`; sorting by position gives root → leaf order." + ] + }, + { + "cell_type": "code", + "execution_count": 48, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "hierarchy: {'Class': 1, 'Group': 3, 'Neighborhood': 0, 'Subclass': 2, 'cluster_id': 4}\n", + "levels (root -> leaf): ['Neighborhood', 'Class', 'Subclass', 'Group', 'cluster_id']\n" + ] + } + ], + "source": [ + "hierarchy = read_elem(h5[\"uns\"][\"hierarchy\"])\n", + "levels = [name for name, _ in sorted(hierarchy.items(), key=lambda kv: int(kv[1]))]\n", + "print(\"hierarchy:\", hierarchy)\n", + "print(\"levels (root -> leaf):\", levels)" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### 4b. The taxonomy table from `uns/cluster_info`\n", + "One row per leaf cluster, with the full ancestor path plus per-level accessions,\n", + "CL ontology IDs, and colors. `read_elem` decodes categoricals back to strings and\n", + "sets the file's `_index` (`cell_label`) as the DataFrame index." + ] + }, + { + "cell_type": "code", + "execution_count": 49, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "shape: (453, 103) | index name: None\n" + ] + }, + { + "data": { + "text/html": [ + "
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NeighborhoodClassSubclassGroupClustercluster_idaccession_groupCL:ID_groupcolor_hex_group
AAACAGCCAAATGCCC-2362_A05NonneuronVascularVLMCVLMCHuman-451Human-451CS20250428_GROUP_0062CL:4023051#c3ec86
AAACAGCCAATTGAGA-2362_A05NonneuronOPC-OligoOligodendrocyteOligo OPALINHuman-1Human-1CS20250428_GROUP_0025CL:0000128#488edc
AAACAGCCAGCATGTC-2362_A05NonneuronImmuneMicrogliaMicrogliaHuman-153Human-153CS20250428_GROUP_0019CL:0000129#cbfc1e
AAACAGCCATTGTGGC-2362_A05NonneuronAstro-EpenAstrocyteAstrocyteHuman-14Human-14CS20250428_GROUP_0039CL:0000127#e16c95
AAACATGCAGTAGGAT-2362_A05NonneuronAstro-EpenAstrocyteAstrocyteHuman-159Human-159CS20250428_GROUP_0039CL:0000127#e16c95
\n", + "
" + ], + "text/plain": [ + " Neighborhood Class Subclass \\\n", + "AAACAGCCAAATGCCC-2362_A05 Nonneuron Vascular VLMC \n", + "AAACAGCCAATTGAGA-2362_A05 Nonneuron OPC-Oligo Oligodendrocyte \n", + "AAACAGCCAGCATGTC-2362_A05 Nonneuron Immune Microglia \n", + "AAACAGCCATTGTGGC-2362_A05 Nonneuron Astro-Epen Astrocyte \n", + "AAACATGCAGTAGGAT-2362_A05 Nonneuron Astro-Epen Astrocyte \n", + "\n", + " Group Cluster cluster_id \\\n", + "AAACAGCCAAATGCCC-2362_A05 VLMC Human-451 Human-451 \n", + "AAACAGCCAATTGAGA-2362_A05 Oligo OPALIN Human-1 Human-1 \n", + "AAACAGCCAGCATGTC-2362_A05 Microglia Human-153 Human-153 \n", + "AAACAGCCATTGTGGC-2362_A05 Astrocyte Human-14 Human-14 \n", + "AAACATGCAGTAGGAT-2362_A05 Astrocyte Human-159 Human-159 \n", + "\n", + " accession_group CL:ID_group color_hex_group \n", + "AAACAGCCAAATGCCC-2362_A05 CS20250428_GROUP_0062 CL:4023051 #c3ec86 \n", + "AAACAGCCAATTGAGA-2362_A05 CS20250428_GROUP_0025 CL:0000128 #488edc \n", + "AAACAGCCAGCATGTC-2362_A05 CS20250428_GROUP_0019 CL:0000129 #cbfc1e \n", + "AAACAGCCATTGTGGC-2362_A05 CS20250428_GROUP_0039 CL:0000127 #e16c95 \n", + "AAACATGCAGTAGGAT-2362_A05 CS20250428_GROUP_0039 CL:0000127 #e16c95 " + ] + }, + "execution_count": 49, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "cluster_info = read_elem(h5[\"uns\"][\"cluster_info\"])\n", + "print(\"shape:\", cluster_info.shape, \"| index name:\", cluster_info.index.name)\n", + "cluster_info[[\"Neighborhood\", \"Class\", \"Subclass\", \"Group\", \"Cluster\",\n", + " \"cluster_id\", \"accession_group\", \"CL:ID_group\", \"color_hex_group\"]].head()" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "> **Note:** `cell_label` (the index) is a *representative cell barcode* per cluster,\n", + "> not the cluster ID. Use `cluster_id` / `Cluster` to identify a cluster." + ] + }, + { + "cell_type": "code", + "execution_count": 50, + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + "453" + ] + }, + "execution_count": 50, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "cluster_info[\"Cluster\"].nunique()" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### 4b-i. Checking what `_index` is set to\n", + "`_index` is an HDF5 attribute on a dataframe group that records which stored\n", + "column becomes the pandas index on read. You can inspect it directly on the raw\n", + "group, or read it off the loaded DataFrame's `index.name`. This works on any\n", + "dataframe group (`obs`, `var`, `uns/cluster_info`, ...)." + ] + }, + { + "cell_type": "code", + "execution_count": 51, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "_index attribute: _index\n", + "all attrs: {'_index': '_index', 'column-order': array(['Neighborhood', 'Class', 'Subclass', 'Group', 'Cluster',\n", + " 'cluster_id', 'cell_type_ontology_term', 'load_id', 'donor_id',\n", + " 'assay', 'assay_ontology_term_id', 'organism',\n", + " 'organism_ontology_term_id', 'development_stage',\n", + " 'anatomical_region', 'anatomical_region_merged',\n", + " 'anatomical_region_ontology_term_id',\n", + " 'brain_region_ontology_term_id', 'self_reported_sex',\n", + " 'self_reported_sex_ontology_term_id', 'self_reported_ethnicity',\n", + " 'self_reported_ethnicity_ontology_term_id', 'disease',\n", + " 'disease_ontology_term_id', 'suspension_type', 'is_primary_data',\n", + " 'atac_confidently_mapped_read_pairs',\n", + " 'atac_fraction_of_genome_in_peaks',\n", + " 'atac_fraction_of_high_quality_fragments_in_cells',\n", + " 'atac_fraction_of_high_quality_fragments_overlapping_tss',\n", + " 'atac_fraction_of_high_quality_fragments_overlapping_peaks',\n", + " 'atac_fraction_of_transposition_events_in_peaks_in_cells',\n", + " 'atac_mean_raw_read_pairs_per_cell',\n", + " 'atac_median_high_quality_fragments_per_cell',\n", + " 'atac_non_nuclear_read_pairs', 'atac_number_of_peaks',\n", + " 'atac_percent_duplicates', 'atac_q30_bases_in_barcode',\n", + " 'atac_q30_bases_in_read_1', 'atac_q30_bases_in_read_2',\n", + " 'atac_q30_bases_in_sample_index_i1', 'atac_sequenced_read_pairs',\n", + " 'atac_tss_enrichment_score', 'atac_unmapped_read_pairs',\n", + " 'atac_valid_barcodes',\n", + " 'gex_fraction_of_transcriptomic_reads_in_cells',\n", + " 'gex_mean_raw_reads_per_cell', 'gex_median_umi_counts_per_cell',\n", + " 'gex_median_genes_per_cell', 'gex_percent_duplicates',\n", + " 'gex_q30_bases_in_umi', 'gex_q30_bases_in_barcode',\n", + " 'gex_q30_bases_in_read_2', 'gex_q30_bases_in_sample_index_i1',\n", + " 'gex_q30_bases_in_sample_index_i2',\n", + " 'gex_reads_mapped_antisense_to_gene',\n", + " 'gex_reads_mapped_confidently_to_exonic_regions',\n", + " 'gex_reads_mapped_confidently_to_genome',\n", + " 'gex_reads_mapped_confidently_to_intergenic_regions',\n", + " 'gex_reads_mapped_confidently_to_intronic_regions',\n", + " 'gex_reads_mapped_confidently_to_transcriptome',\n", + " 'gex_reads_mapped_to_genome', 'gex_reads_with_tso',\n", + " 'gex_sequenced_read_pairs', 'gex_total_genes_detected',\n", + " 'gex_valid_umis', 'gex_valid_barcodes', 'total_counts',\n", + " 'total_genes', 'doublet_score', 'organism_sci', 'accession_group',\n", + " 'embedding_set', 'CL:ID_group', 'tokens_group',\n", + " 'display_order_group', 'literature_support',\n", + " 'literature_name_short', 'literature_name_long', 'curated_markers',\n", + " 'color_hex_group', 'color_group', 'accession_subclass',\n", + " 'CL:ID_subclass', 'tokens_subclass', 'display_order_subclass',\n", + " 'color_hex_subclass', 'color_subclass', 'accession_class',\n", + " 'CL:ID_class', 'tokens_class', 'display_order_class',\n", + " 'color_hex_class', 'color_class', 'accession_neighborhood',\n", + " 'CL:ID_neighborhood', 'tokens_neighborhood',\n", + " 'display_order_neighborhood', 'color_hex_neighborhood',\n", + " 'color_neighborhood', 'cell_barcode', 'barcoded_cell_sample_label',\n", + " 'alignment_job_database'], dtype=object), 'encoding-type': 'dataframe', 'encoding-version': '0.2.0'}\n", + "cluster_info.index.name: None\n" + ] + } + ], + "source": [ + "grp = h5[\"uns\"][\"cluster_info\"] # any dataframe group: h5[\"obs\"], h5[\"var\"], ...\n", + "\n", + "# Method 1: read the raw HDF5 attribute (often bytes -> decode).\n", + "idx = grp.attrs[\"_index\"]\n", + "idx = idx.decode() if isinstance(idx, bytes) else idx\n", + "print(\"_index attribute:\", idx)\n", + "\n", + "# See it alongside the data columns and encoding type:\n", + "print(\"all attrs:\", dict(grp.attrs))\n", + "\n", + "# Method 2: on the already-loaded DataFrame, it's the index name.\n", + "print(\"cluster_info.index.name:\", cluster_info.index.name)" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### 4c. Node counts per level" + ] + }, + { + "cell_type": "code", + "execution_count": 52, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "Neighborhood 4 nodes\n", + "Class 12 nodes\n", + "Subclass 36 nodes\n", + "Group 60 nodes\n", + "cluster_id 453 nodes\n" + ] + } + ], + "source": [ + "for lvl in levels:\n", + " col = \"Cluster\" if lvl == \"cluster_id\" else lvl\n", + " print(f\"{lvl:<14} {cluster_info[col].nunique()} nodes\")" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## 5. Same thing via the `AITTaxonomy` helper\n", + "The steps above are packaged in `bkbit/data_translators/ait_taxonomy_parser.py`.\n", + "Run this from the repo root so the import resolves." + ] + }, + { + "cell_type": "code", + "execution_count": 53, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "title: Human_HMBA_basalganglia_consensus_AIT\n", + "schema_version: v1.0\n", + "reference_genome:GRCh38\n", + "levels: Neighborhood > Class > Subclass > Group > cluster_id\n", + "leaf clusters: 453\n", + " Neighborhood 4 nodes\n", + " Class 12 nodes\n", + " Subclass 36 nodes\n", + " Group 60 nodes\n", + " cluster_id 453 nodes\n", + "genes (var): 36,601\n" + ] + } + ], + "source": [ + "from bkbit.data_translators.ait_taxonomy_parser import AITTaxonomy\n", + "\n", + "# load_obs=False skips the large per-cell table — recommended for remote files.\n", + "tax = AITTaxonomy.from_file(url, load_obs=False)\n", + "print(tax.summary())" + ] + }, + { + "cell_type": "code", + "execution_count": 54, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "561 edges; first 6:\n", + " Neighborhood Nonneuron -> Class Vascular\n", + " Class Vascular -> Subclass VLMC\n", + " Subclass VLMC -> Group VLMC\n", + " Group VLMC -> cluster_id Human-451\n", + " Neighborhood Nonneuron -> Class OPC-Oligo\n", + " Class OPC-Oligo -> Subclass Oligodendrocyte\n" + ] + } + ], + "source": [ + "# Parent -> child tree edges derived from each cluster's ancestor path.\n", + "edges = tax.edges()\n", + "print(f\"{len(edges)} edges; first 6:\")\n", + "for e in edges[:6]:\n", + " print(\" \", e[0], e[1], \"->\", e[2], e[3])" + ] + }, + { + "cell_type": "code", + "execution_count": 55, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "wrote: bkbit/data/ait_output/Human_taxonomy.csv and bkbit/data/ait_output/Human_cluster_info.pkl\n" + ] + } + ], + "source": [ + "import os\n", + "\n", + "OUT_DIR = \"bkbit/data/ait_output\" # relative to the repo root\n", + "os.makedirs(OUT_DIR, exist_ok=True)\n", + "csv_path = f\"{OUT_DIR}/{SPECIES}_taxonomy.csv\"\n", + "pkl_path = f\"{OUT_DIR}/{SPECIES}_cluster_info.pkl\"\n", + "\n", + "tax.to_csv(csv_path)\n", + "tax.cluster_info.to_pickle(pkl_path)\n", + "print(\"wrote:\", csv_path, \"and\", pkl_path)" + ] + }, + { + "cell_type": "code", + "execution_count": 56, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "wrote: ait_output/Human_taxonomy.csv and ait_output/Human_cluster_info.pkl\n" + ] + } + ], + "source": [ + "import os\n", + "\n", + "os.makedirs(\"ait_output\", exist_ok=True)\n", + "csv_path = f\"ait_output/{SPECIES}_taxonomy.csv\"\n", + "pkl_path = f\"ait_output/{SPECIES}_cluster_info.pkl\"\n", + "\n", + "tax.to_csv(csv_path)\n", + "tax.cluster_info.to_pickle(pkl_path)\n", + "print(\"wrote:\", csv_path, \"and\", pkl_path)" + ] + }, + { + "cell_type": "code", + "execution_count": 57, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "Human: 453 clusters -> saved\n", + "Macaque: 388 clusters -> saved\n", + "Marmoset: 594 clusters -> saved\n" + ] + } + ], + "source": [ + "os.makedirs(\"bkbit/data/ait_output\", exist_ok=True)\n", + "for sp, u in URLS.items():\n", + " t = AITTaxonomy.from_file(u, load_obs=False)\n", + " t.to_csv(f\"bkbit/data/ait_output/{sp}_taxonomy.csv\")\n", + " t.cluster_info.to_pickle(f\"bkbit/data/ait_output/{sp}_cluster_info.pkl\")\n", + " print(f\"{sp}: {t.cluster_info.shape[0]} clusters -> saved\")" + ] + }, + { + "cell_type": "code", + "execution_count": 59, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "CL:ID_class/ (group) -> ['categories', 'codes']\n", + "CL:ID_group/ (group) -> ['categories', 'codes']\n", + "CL:ID_neighborhood/ (group) -> ['categories', 'codes']\n", + "CL:ID_subclass/ (group) -> ['categories', 'codes']\n", + "Class/ (group) -> ['categories', 'codes']\n", + "Cluster/ (group) -> ['categories', 'codes']\n", + "Group/ (group) -> ['categories', 'codes']\n", + "Neighborhood/ (group) -> ['categories', 'codes']\n", + "Subclass/ (group) -> ['categories', 'codes']\n", + "_index: shape=(1034819,) dtype=object\n", + "accession_class/ (group) -> ['categories', 'codes']\n", + "accession_group/ (group) -> ['categories', 'codes']\n", + "accession_neighborhood/ (group) -> ['categories', 'codes']\n", + "accession_subclass/ (group) -> ['categories', 'codes']\n", + "alignment_job_database/ (group) -> ['categories', 'codes']\n", + "anatomical_region/ (group) -> ['categories', 'codes']\n", + "anatomical_region_merged/ (group) -> ['categories', 'codes']\n", + "anatomical_region_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "assay/ (group) -> ['categories', 'codes']\n", + "assay_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "atac_confidently_mapped_read_pairs: shape=(1034819,) dtype=float64\n", + "atac_fraction_of_genome_in_peaks: shape=(1034819,) dtype=float64\n", + "atac_fraction_of_high_quality_fragments_in_cells: shape=(1034819,) dtype=float64\n", + "atac_fraction_of_high_quality_fragments_overlapping_peaks: shape=(1034819,) dtype=float64\n", + "atac_fraction_of_high_quality_fragments_overlapping_tss: shape=(1034819,) dtype=float64\n", + "atac_fraction_of_transposition_events_in_peaks_in_cells: shape=(1034819,) dtype=float64\n", + "atac_mean_raw_read_pairs_per_cell: shape=(1034819,) dtype=float64\n", + "atac_median_high_quality_fragments_per_cell: shape=(1034819,) dtype=float64\n", + "atac_non_nuclear_read_pairs: shape=(1034819,) dtype=float64\n", + "atac_number_of_peaks: shape=(1034819,) dtype=int32\n", + "atac_percent_duplicates: shape=(1034819,) dtype=float64\n", + "atac_q30_bases_in_barcode: shape=(1034819,) dtype=float64\n", + "atac_q30_bases_in_read_1: shape=(1034819,) dtype=float64\n", + "atac_q30_bases_in_read_2: shape=(1034819,) dtype=float64\n", + "atac_q30_bases_in_sample_index_i1: shape=(1034819,) dtype=float64\n", + "atac_sequenced_read_pairs: shape=(1034819,) dtype=int32\n", + "atac_tss_enrichment_score: shape=(1034819,) dtype=float64\n", + "atac_unmapped_read_pairs: shape=(1034819,) dtype=float64\n", + "atac_valid_barcodes: shape=(1034819,) dtype=float64\n", + "barcoded_cell_sample_label/ (group) -> ['categories', 'codes']\n", + "brain_region_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "cell_barcode/ (group) -> ['categories', 'codes']\n", + "cell_type_ontology_term/ (group) -> ['categories', 'codes']\n", + "cluster_id/ (group) -> ['categories', 'codes']\n", + "color_class: shape=(1034819,) dtype=float64\n", + "color_group: shape=(1034819,) dtype=float64\n", + "color_hex_class/ (group) -> ['categories', 'codes']\n", + "color_hex_group/ (group) -> ['categories', 'codes']\n", + "color_hex_neighborhood/ (group) -> ['categories', 'codes']\n", + "color_hex_subclass/ (group) -> ['categories', 'codes']\n", + "color_neighborhood: shape=(1034819,) dtype=float64\n", + "color_subclass: shape=(1034819,) dtype=float64\n", + "curated_markers/ (group) -> ['categories', 'codes']\n", + "development_stage/ (group) -> ['categories', 'codes']\n", + "disease/ (group) -> ['categories', 'codes']\n", + "disease_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "display_order_class: shape=(1034819,) dtype=int64\n", + "display_order_group: shape=(1034819,) dtype=int64\n", + "display_order_neighborhood: shape=(1034819,) dtype=int64\n", + "display_order_subclass: shape=(1034819,) dtype=int64\n", + "donor_id/ (group) -> ['categories', 'codes']\n", + "doublet_score: shape=(1034819,) dtype=float64\n", + "embedding_set/ (group) -> ['categories', 'codes']\n", + "gex_fraction_of_transcriptomic_reads_in_cells: shape=(1034819,) dtype=float64\n", + "gex_mean_raw_reads_per_cell: shape=(1034819,) dtype=float64\n", + "gex_median_genes_per_cell: shape=(1034819,) dtype=float64\n", + "gex_median_umi_counts_per_cell: shape=(1034819,) dtype=float64\n", + "gex_percent_duplicates: shape=(1034819,) dtype=float64\n", + "gex_q30_bases_in_barcode: shape=(1034819,) dtype=float64\n", + "gex_q30_bases_in_read_2: shape=(1034819,) dtype=float64\n", + "gex_q30_bases_in_sample_index_i1: shape=(1034819,) dtype=float64\n", + "gex_q30_bases_in_sample_index_i2: shape=(1034819,) dtype=float64\n", + "gex_q30_bases_in_umi: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_antisense_to_gene: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_confidently_to_exonic_regions: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_confidently_to_genome: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_confidently_to_intergenic_regions: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_confidently_to_intronic_regions: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_confidently_to_transcriptome: shape=(1034819,) dtype=float64\n", + "gex_reads_mapped_to_genome: shape=(1034819,) dtype=float64\n", + "gex_reads_with_tso: shape=(1034819,) dtype=float64\n", + "gex_sequenced_read_pairs: shape=(1034819,) dtype=int32\n", + "gex_total_genes_detected: shape=(1034819,) dtype=int32\n", + "gex_valid_barcodes: shape=(1034819,) dtype=float64\n", + "gex_valid_umis: shape=(1034819,) dtype=float64\n", + "is_primary_data/ (group) -> ['categories', 'codes']\n", + "literature_name_long/ (group) -> ['categories', 'codes']\n", + "literature_name_short/ (group) -> ['categories', 'codes']\n", + "literature_support/ (group) -> ['categories', 'codes']\n", + "load_id/ (group) -> ['categories', 'codes']\n", + "organism/ (group) -> ['categories', 'codes']\n", + "organism_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "organism_sci/ (group) -> ['categories', 'codes']\n", + "self_reported_ethnicity/ (group) -> ['categories', 'codes']\n", + "self_reported_ethnicity_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "self_reported_sex/ (group) -> ['categories', 'codes']\n", + "self_reported_sex_ontology_term_id/ (group) -> ['categories', 'codes']\n", + "suspension_type/ (group) -> ['categories', 'codes']\n", + "tokens_class/ (group) -> ['categories', 'codes']\n", + "tokens_group/ (group) -> ['categories', 'codes']\n", + "tokens_neighborhood/ (group) -> ['categories', 'codes']\n", + "tokens_subclass/ (group) -> ['categories', 'codes']\n", + "total_counts: shape=(1034819,) dtype=int64\n", + "total_genes: shape=(1034819,) dtype=int64\n" + ] + } + ], + "source": [ + "for k in h5[\"obs\"].keys():\n", + " obj = h5[\"obs\"][k]\n", + " if isinstance(obj, h5py.Group):\n", + " print(f\"{k}/ (group) -> {list(obj.keys())[:8]}\")\n", + " else:\n", + " print(f\"{k}: shape={obj.shape} dtype={obj.dtype}\")" + ] + }, + { + "cell_type": "code", + "execution_count": 60, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "unique donor_ids: ['H18.30.001', 'H19.30.004', 'H20.30.001', 'H20.30.002', 'H21.30.004', 'H23.30.001', 'H24.30.001', 'H24.30.003', 'H24.30.004', 'H24.30.007']\n", + "n cells: 1034819\n", + "counts per donor:\n", + "H24.30.004 169312\n", + "H24.30.001 151553\n", + "H23.30.001 146672\n", + "H24.30.003 126324\n", + "H24.30.007 115833\n", + "H21.30.004 108830\n", + "H20.30.001 77759\n", + "H20.30.002 74595\n", + "H18.30.001 56363\n", + "H19.30.004 7578\n", + "Name: count, dtype: int64\n" + ] + } + ], + "source": [ + "# Extract donor_ids from obs. donor_id is a categorical, so:\n", + "# - unique donors = the `categories` array (cheap; no per-cell read)\n", + "# - per-cell donor_id = decode categories, then index by `codes`\n", + "donor_grp = h5[\"obs\"][\"donor_id\"]\n", + "\n", + "categories = [c.decode() if isinstance(c, bytes) else c\n", + " for c in donor_grp[\"categories\"][:]]\n", + "print(\"unique donor_ids:\", categories)\n", + "\n", + "# Per-cell donor_id for all cells (maps each code back to its category):\n", + "codes = donor_grp[\"codes\"][:]\n", + "donor_per_cell = pd.Categorical.from_codes(codes, categories=categories)\n", + "print(\"n cells:\", len(donor_per_cell))\n", + "print(\"counts per donor:\")\n", + "print(pd.Series(donor_per_cell).value_counts())" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": ".venv (3.12.4)", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.12.4" + } + }, + "nbformat": 4, + "nbformat_minor": 4 +}