Expanding the map tool to show data related to a sample #5
Description
Contingency: this might require schema updates to align sample entities with data entities
At the hackathon, we discussed expanded data search that would be valuable to see on the map tool.
Proposal was that from a sample that's shared across programs, can we show data results?
We discovered some samples from MONet that are shared and have data at EMSL, JGI, and NMDC.
The MONet sample that was used as an example :
JGI: 60940_6_TOP : https://data.jgi.doe.gov/search?q=monet+AND+PROJECT%3A%6060940_6_TOP%60&t=advanced&expanded=IMG_AP-1474436
EMSL: 60940_6 : https://sc-data.emsl.pnnl.gov/sample?page=1&per_page=10&q=60940_6 (Find the data on https://sc-data.emsl.pnnl.gov/monet by searching for Project 60940)
NMDC: 60940_6_TOP : Metadata was captured in the submission portal, not yet on Data Portal
This sample can be shown on a map, and show something along the lines of "blah gene from the metaG data, and the O:C ratio from the FTICR data is blah". EMSL also has additional metadata like microbial biomass, pH, total C, etc (see 2nd SC link)
CC: @kfagnan @madettmann