diff --git a/.github/workflows/build-and-publish.yml b/.github/workflows/build-and-publish.yml index 92f5386..140fa0f 100644 --- a/.github/workflows/build-and-publish.yml +++ b/.github/workflows/build-and-publish.yml @@ -13,6 +13,10 @@ on: permissions: contents: write +concurrency: + group: ${{ github.workflow }} + cancel-in-progress: false + jobs: check: runs-on: ubuntu-latest @@ -20,7 +24,7 @@ jobs: has_new_commit: ${{ steps.check.outputs.has_new_commit }} remote_sha: ${{ steps.check.outputs.remote_sha }} steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v7 - name: Check for new breseq commit id: check env: @@ -44,9 +48,9 @@ jobs: subdir: osx-64 runs-on: ${{ matrix.os }} steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v7 - - uses: conda-incubator/setup-miniconda@v3 + - uses: conda-incubator/setup-miniconda@v4 with: miniforge-version: latest channels: conda-forge,bioconda @@ -67,7 +71,7 @@ jobs: --output-folder ./built-pkgs - name: Upload built package - uses: actions/upload-artifact@v4 + uses: actions/upload-artifact@v7 with: name: pkg-${{ matrix.subdir }} path: built-pkgs/${{ matrix.subdir }}/*.conda @@ -78,16 +82,16 @@ jobs: if: needs.check.outputs.has_new_commit == 'true' runs-on: ubuntu-latest steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v7 with: fetch-depth: 0 - - uses: actions/download-artifact@v4 + - uses: actions/download-artifact@v7 with: pattern: pkg-* path: downloaded-pkgs - - uses: conda-incubator/setup-miniconda@v3 + - uses: conda-incubator/setup-miniconda@v4 with: miniforge-version: latest channels: conda-forge @@ -128,6 +132,8 @@ jobs: - name: Update state file on main run: | + git fetch origin main + git reset --hard origin/main cat > state/last-published-commit.json <