diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/TakeHomeProblems_Wk10_LK.qmd b/course/10_Downsampling/homeworks/lkisselbach-afk/TakeHomeProblems_Wk10_LK.qmd new file mode 100644 index 00000000..bfcdd377 --- /dev/null +++ b/course/10_Downsampling/homeworks/lkisselbach-afk/TakeHomeProblems_Wk10_LK.qmd @@ -0,0 +1,36 @@ +--- +title: "Week 10 - Homework Walkthrough" +format: pdf +--- + +# Problem 1 + +Load a dataset into R, gate it however you like, and then export out a population of interest as their own .fcs files. Open them in either Floreada.io or the commercial software of your choice, and take a screenshot of how they look by two markers of interest. + +# Answer 1 + +![Alt text](images/Screenshot01.png) + +# Problem 2 + +In the example for Downsampling() we only changed one keyword (GUID), after substituting in our desired addon right before the .fcs. Since keyword use might vary by manufacturer, create a couple additional arguments for Downsampling() that allow you to change out the values for some additional keywords. + +# Answer 2 + +![Alt text](images/Screenshot02.png) + +![Alt text](images/Screenshot03.png) + +![Alt text](images/Screenshot04.png) + +![Alt text](images/Screenshot05.png) + +# Problem 3 + +Trickier - After concatenating out an .fcs file for a cell subset of your choice, reload it back into R, extract out both the exprs matrix, and the description list. Using the keywords that got added, figure out a way using dplyr to revert the numeric keys (denoted by “_key”) in the exprs matrix back to their original character values as recorded in the keywords. + +# Answer 3 + +![Alt text](images/Screenshot06.png) + +![Alt text](images/Screenshot07.png) \ No newline at end of file diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot01.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot01.png new file mode 100644 index 00000000..254f5e98 Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot01.png differ diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot02.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot02.png new file mode 100644 index 00000000..72278639 Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot02.png differ diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot03.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot03.png new file mode 100644 index 00000000..e6013a64 Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot03.png differ diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot04.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot04.png new file mode 100644 index 00000000..cbf81cd4 Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot04.png differ diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot05.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot05.png new file mode 100644 index 00000000..78fb0cb9 Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot05.png differ diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot06.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot06.png new file mode 100644 index 00000000..38596872 Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot06.png differ diff --git a/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot07.png b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot07.png new file mode 100644 index 00000000..f95bf68c Binary files /dev/null and b/course/10_Downsampling/homeworks/lkisselbach-afk/images/Screenshot07.png differ