NCLscan/ChangeLog at master · TreesLab/NCLscan · GitHub

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2022-02-08
  - remove "readthrough filter".

2021-11-03
  - supporting for novoalign V4.

2019-05-21
  - fix a bug in "get_gene_name.py".

2019-02-19
  - fix a bug that missed by g++ of version <= 6.

2019-01-18
  - fix the "array overflow" problem in "JSFilter".

2018-11-19
  - fix default value bug in "get_gene_name.py".

2018-07-10
  - fix the re pattern to fit the newer bedtools.

2018-07-06
  - fix duplicate sequence name issue.

2016-03-22
  - Update version to 'v1.6'
  - release new version of NCLscan with a new interface.
  - new 'mp_blat.py' to make blat "multi-processing".

2016-03-11
  - retain only the common gene name for the intragenic case.

2016-03-08
  - release c++ source code

2016-01-14
  - Fix some bugs

2015-10-22
  - Update version to 'v1.4'
  - The number of support reads (total/junc/span) are appended to the final result file.