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NEWS.md

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PAutilities 1.1.0

What's new:

  • Increased R dependency to 3.5.0
  • Added risk analysis for cardiovascular disease
  • Added Bland-Altman analysis function
  • Added functions for time series dataframes, to test for continuity, reduce to full days, and manage variable order
  • Added a function to determine epoch length
  • Continued to develop functionality related to resting energy expenditure and body mass index (the latter will eventually be moved to the anthropometry package -- see https://github.com/paulhibbing/anthropometry)
  • Added functionality for residual adjustment

PAutilities 1.0.1

What's new:

  • Some minor modifications have been made to clean up internal code.

  • The transition pairing method unit tests have been temporarily suspended.

PAutilities 1.0.0

What's new:

  • Added a function (weight_status) to classify body mass index for adults using CDC cutoffs. (This can also be used as a wrapper for the existing function that classifies youth BMI based on CDC percentiles.)

  • Added Rcpp functions related to rolling windows (get_indices to extract indices for rolling windows; rolling_groups to extract rolling subsequences of raw data).

  • Removed dependency on orphaned clues package (resulting in changes to unit test cache)

PAutilities 0.3.1

What's new:

  • Added a vignette for the Transition Pairing Method

PAutilities 0.3.0

What's new:

  • Added paired equivalence testing functionality, including plot method
  • Added a function to classify activity intensity from metabolic equivalents and (if available) posture
  • Added a wrapper for base::rle that gives a data frame with original rle information, plus start/stop indices for each run
  • Added various performance indicators to summary.transition
  • Converted summary.transition output to an S4 framework, and added addition/subtraction methods
  • Added spurious curve generation functions
  • Adjusted Transition Pairing Method to make it more robust (e.g. to deal with missing values)

PAutilities 0.2.0

What's new:

  • Removed unused dependency on package AGread
  • Added support for calculation of RMR via sliding window analysis
  • Added process management utility for easy messaging and timekeeping
  • Added tools to compare objects more specifically than via all.equal
  • Added na.rm = TRUE to the mean bias line on Bland-Altman plots
  • Added shape control as an option for Bland-Altman plots
  • Cleaned up TPM summary method
  • Added rejection of non-consecutive pairings to the TPM

PAutilities 0.1.2

Summary

This is a second resubmission of version 0.1.0. The following changes have been made:

  • Changed title to eliminate redundancy
  • Expanded the description field in DESCRIPTION to provide more detail about what the package does.
  • Swapped donttest{} in for dontrun{} in documentation where appropriate
  • Added detail to package documentation

PAutilities 0.1.1

Summary

This is a resubmission of version 0.1.0. The extraneous LICENSE file has been removed.

PAutilities 0.1.0

Summary

This is the initial release of PAutilities. Current features include:

  • Bland-Altman plots
  • Bouted moderate-to-vigorous physical activity analysis
  • Formatted descriptive statistics
  • Demographic calculations (age, BMI-for-age percentile)
  • Metabolic calculations (energy expenditure conversions, basal metabolic rate predictions)
  • Analysis of bout detection algorithm performance