diff --git a/package-lock.json b/package-lock.json
index 6e0e4cb8..ec3fbbb3 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -18,7 +18,7 @@
         "async-mutex": "^0.5.0",
         "chokidar": "^5.0.0",
         "cli-spinner": "^0.2.10",
-        "d3": "^7.9.0",
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         "github-slugger": "^2.0.0",
@@ -34,7 +34,7 @@
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-        "minimatch": "^11.0.3",
+        "minimatch": "^11.0.5",
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@@ -45,7 +45,7 @@
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         "rehype-mathjax": "^7.1.0",
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@@ -59,9 +59,9 @@
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-        "serve-handler": "^6.1.7",
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@@ -69,7 +69,7 @@
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@@ -1163,9 +1163,9 @@
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+      "resolved": "https://registry.npmjs.org/@isaacs/nonrecursive-glob-match/-/nonrecursive-glob-match-1.1.0.tgz",
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       "license": "BlueOak-1.0.0"
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@@ -1999,29 +1999,29 @@
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+      "resolved": "https://registry.npmjs.org/@shikijs/core/-/core-4.6.0.tgz",
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-        "@shikijs/types": "4.5.0",
-        "@shikijs/vscode-textmate": "^10.0.2",
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+        "@shikijs/vscode-textmate": "^10.1.0",
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-      "resolved": "https://registry.npmjs.org/@shikijs/engine-javascript/-/engine-javascript-4.5.0.tgz",
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+      "version": "4.6.0",
+      "resolved": "https://registry.npmjs.org/@shikijs/engine-javascript/-/engine-javascript-4.6.0.tgz",
+      "integrity": "sha512-K0oqxFoL+kEMdz89mHLFO15Tsbv3kFZ6WR1cXZKMvLSc+oqaM00A6pyga1qSeXB22dP0tTiSApRcGBaKWsEccg==",
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-        "@shikijs/vscode-textmate": "^10.0.2",
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@@ -2029,38 +2029,38 @@
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+      "resolved": "https://registry.npmjs.org/@shikijs/engine-oniguruma/-/engine-oniguruma-4.6.0.tgz",
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-        "@shikijs/vscode-textmate": "^10.0.2"
+        "@shikijs/types": "4.6.0",
+        "@shikijs/vscode-textmate": "^10.1.0"
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+      "resolved": "https://registry.npmjs.org/@shikijs/langs/-/langs-4.6.0.tgz",
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       "license": "MIT",
       "dependencies": {
-        "@shikijs/types": "4.5.0"
+        "@shikijs/types": "4.6.0"
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     "node_modules/@shikijs/primitive": {
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-      "resolved": "https://registry.npmjs.org/@shikijs/primitive/-/primitive-4.5.0.tgz",
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+      "version": "4.6.0",
+      "resolved": "https://registry.npmjs.org/@shikijs/primitive/-/primitive-4.6.0.tgz",
+      "integrity": "sha512-c54+TQEo9ToqgfL/AU8FpjnV09+GA9Oa7M5ROkkXteZfp5XzpAJGXjjvZQFQioJOwm/w/6Z3lIzQstAkl8coag==",
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-        "@shikijs/vscode-textmate": "^10.0.2",
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@@ -2068,24 +2068,24 @@
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+      "resolved": "https://registry.npmjs.org/@shikijs/themes/-/themes-4.6.0.tgz",
+      "integrity": "sha512-qHAVAs80RiGD+IRuH9G+JPDOEc9A/kHsng4EzCUCwB9bLzW6Z0y9WETh2YyCcADJBmfrIaJ1Jp7KBNP6FHkgtQ==",
       "license": "MIT",
       "dependencies": {
-        "@shikijs/types": "4.5.0"
+        "@shikijs/types": "4.6.0"
       },
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+      "version": "4.6.0",
+      "resolved": "https://registry.npmjs.org/@shikijs/types/-/types-4.6.0.tgz",
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       "dependencies": {
-        "@shikijs/vscode-textmate": "^10.0.2",
+        "@shikijs/vscode-textmate": "^10.1.0",
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@@ -2093,9 +2093,9 @@
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+      "version": "10.1.0",
+      "resolved": "https://registry.npmjs.org/@shikijs/vscode-textmate/-/vscode-textmate-10.1.0.tgz",
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@@ -2833,6 +2833,7 @@
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+      "license": "MIT",
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@@ -2902,49 +2903,51 @@
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-        "d3-axis": "3",
-        "d3-brush": "3",
-        "d3-chord": "3",
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-        "d3-contour": "4",
-        "d3-delaunay": "6",
-        "d3-dispatch": "3",
-        "d3-drag": "3",
-        "d3-dsv": "3",
-        "d3-ease": "3",
-        "d3-fetch": "3",
-        "d3-force": "3",
-        "d3-format": "3",
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-        "d3-hierarchy": "3",
-        "d3-interpolate": "3",
-        "d3-path": "3",
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-        "d3-random": "3",
-        "d3-scale": "4",
-        "d3-scale-chromatic": "3",
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-        "d3-time": "3",
-        "d3-time-format": "4",
-        "d3-timer": "3",
-        "d3-transition": "3",
-        "d3-zoom": "3"
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+      "license": "ISC",
+      "dependencies": {
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+        "d3-axis": "^3.0.1",
+        "d3-brush": "^3.0.1",
+        "d3-chord": "^3.0.2",
+        "d3-color": "^3.1.1",
+        "d3-contour": "^4.0.3",
+        "d3-delaunay": "^6.0.6",
+        "d3-dispatch": "^3.0.2",
+        "d3-drag": "^3.0.1",
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+        "d3-ease": "^3.0.2",
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+        "d3-time": "^3.1.1",
+        "d3-time-format": "^4.1.1",
+        "d3-timer": "^3.0.2",
+        "d3-transition": "^3.0.2",
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+      "resolved": "https://registry.npmjs.org/d3-array/-/d3-array-3.2.5.tgz",
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+      "license": "ISC",
       "dependencies": {
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@@ -2953,17 +2956,19 @@
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+      "license": "ISC",
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-      "resolved": "https://registry.npmjs.org/d3-brush/-/d3-brush-3.0.0.tgz",
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@@ -2976,9 +2981,10 @@
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@@ -2987,28 +2993,31 @@
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@@ -3017,17 +3026,19 @@
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+      "resolved": "https://registry.npmjs.org/minimatch/-/minimatch-11.0.5.tgz",
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-        "@isaacs/nonrecursive-glob-match": "^1.0.3",
+        "@isaacs/nonrecursive-glob-match": "^1.1.0",
         "brace-expansion": "^5.0.12"
       },
       "engines": {
-        "node": "18 || 20 || >=22"
+        "node": "20 || >=22"
       },
       "funding": {
         "url": "https://github.com/sponsors/isaacs"
@@ -6221,9 +6257,9 @@
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-      "resolved": "https://registry.npmjs.org/rehype-pretty-code/-/rehype-pretty-code-0.14.5.tgz",
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+      "version": "0.14.6",
+      "resolved": "https://registry.npmjs.org/rehype-pretty-code/-/rehype-pretty-code-0.14.6.tgz",
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@@ -6515,9 +6551,10 @@
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-      "version": "3.0.2",
-      "resolved": "https://registry.npmjs.org/robust-predicates/-/robust-predicates-3.0.2.tgz",
-      "integrity": "sha512-IXgzBWvWQwE6PrDI05OvmXUIruQTcoMDzRsOd5CDvHCVLcLHMTSYvOK5Cm46kWqlV3yAbuSpBZdJ5oP5OUoStg=="
+      "version": "3.0.3",
+      "resolved": "https://registry.npmjs.org/robust-predicates/-/robust-predicates-3.0.3.tgz",
+      "integrity": "sha512-NS3levdsRIUOmiJ8FZWCP7LG3QpJyrs/TE0Zpf1yvZu8cAJJ6QMW92H1c7kWpdIHo8RvmLxN/o2JXTKHp74lUA==",
+      "license": "Unlicense"
     },
     "node_modules/run-parallel": {
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@@ -6545,7 +6582,8 @@
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+      "integrity": "sha512-PdhdWy89SiZogBLaw42zdeqtRJ//zFd2PgQavcICDUgJT5oW10QCRKbJ6bg4r0/UY2M6BWd5tkxuGFRvCkgfHQ==",
+      "license": "BSD-3-Clause"
     },
     "node_modules/rxjs": {
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@@ -6560,7 +6598,8 @@
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       "resolved": "https://registry.npmjs.org/safer-buffer/-/safer-buffer-2.1.2.tgz",
-      "integrity": "sha512-YZo3K82SD7Riyi0E1EQPojLz7kpepnSQI9IyPbHHg1XXXevb5dJI7tpyN2ADxGcQbHG7vcyRHk0cbwqcQriUtg=="
+      "integrity": "sha512-YZo3K82SD7Riyi0E1EQPojLz7kpepnSQI9IyPbHHg1XXXevb5dJI7tpyN2ADxGcQbHG7vcyRHk0cbwqcQriUtg==",
+      "license": "MIT"
     },
     "node_modules/sass": {
       "version": "1.99.0",
@@ -7021,9 +7060,9 @@
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     "node_modules/serve-handler": {
-      "version": "6.1.7",
-      "resolved": "https://registry.npmjs.org/serve-handler/-/serve-handler-6.1.7.tgz",
-      "integrity": "sha512-CinAq1xWb0vR3twAv9evEU8cNWkXCb9kd5ePAHUKJBkOsUpR1wt/CvGdeca7vqumL1U5cSaeVQ6zZMxiJ3yWsg==",
+      "version": "6.1.8",
+      "resolved": "https://registry.npmjs.org/serve-handler/-/serve-handler-6.1.8.tgz",
+      "integrity": "sha512-CYwNp8vJjDHTSQq52gHRVNkNOl89b5Q4HOHuQzbvodSyN+Y7ZgXy1pJI1PUKbSKK7NYgoPvI33EjkIxNa7kDmA==",
       "license": "MIT",
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@@ -7107,18 +7146,18 @@
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-      "version": "4.5.0",
-      "resolved": "https://registry.npmjs.org/shiki/-/shiki-4.5.0.tgz",
-      "integrity": "sha512-OcRW72ngQvc+MSVWBRIovC/BTW589iUE/Vxav7VeM4RcY9MUjqB+IR6ILG1k9nuW6LiG/nct9uma4/MBtnZbmQ==",
-      "license": "MIT",
-      "dependencies": {
-        "@shikijs/core": "4.5.0",
-        "@shikijs/engine-javascript": "4.5.0",
-        "@shikijs/engine-oniguruma": "4.5.0",
-        "@shikijs/langs": "4.5.0",
-        "@shikijs/themes": "4.5.0",
-        "@shikijs/types": "4.5.0",
-        "@shikijs/vscode-textmate": "^10.0.2",
+      "version": "4.6.0",
+      "resolved": "https://registry.npmjs.org/shiki/-/shiki-4.6.0.tgz",
+      "integrity": "sha512-imjLsVHgPuWhvpU3P+zOekvMYqnel7QmKsFC4Sn0fCuAvaaalBsxwKEsrU8Ko5BdFnZA6Go/8a0RzahS634UgA==",
+      "license": "MIT",
+      "dependencies": {
+        "@shikijs/core": "4.6.0",
+        "@shikijs/engine-javascript": "4.6.0",
+        "@shikijs/engine-oniguruma": "4.6.0",
+        "@shikijs/langs": "4.6.0",
+        "@shikijs/themes": "4.6.0",
+        "@shikijs/types": "4.6.0",
+        "@shikijs/vscode-textmate": "^10.1.0",
         "@types/hast": "^3.0.5"
       },
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@@ -7766,9 +7805,9 @@
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-      "resolved": "https://registry.npmjs.org/ws/-/ws-8.22.0.tgz",
-      "integrity": "sha512-Ydggc987+RO0AnWtZ/7Wq9FtNvcrL1b/RO0ud9mWjUPgDrsAAwQSF51sm2hm1XofbU/4jkpGEsLFsZZxU+1DOg==",
+      "version": "8.22.1",
+      "resolved": "https://registry.npmjs.org/ws/-/ws-8.22.1.tgz",
+      "integrity": "sha512-oyL6OPYme/CmiFvNuGzeoxCJ4nOrZE2O1FwM9MWM1AsGri6nLXB2pg+lNA8aLeXMSav0J6eIVS1j6vUPzUtK9g==",
       "license": "MIT",
       "engines": {
         "node": ">=10.0.0"
diff --git a/package.json b/package.json
index c8e8cf01..f41c34fb 100644
--- a/package.json
+++ b/package.json
@@ -44,7 +44,7 @@
     "async-mutex": "^0.5.0",
     "chokidar": "^5.0.0",
     "cli-spinner": "^0.2.10",
-    "d3": "^7.9.0",
+    "d3": "^7.9.2",
     "esbuild-sass-plugin": "^3.7.0",
     "flexsearch": "^0.8.212",
     "github-slugger": "^2.0.0",
@@ -60,7 +60,7 @@
     "mdast-util-to-hast": "^13.2.1",
     "mdast-util-to-string": "^4.0.0",
     "micromorph": "^0.4.5",
-    "minimatch": "^11.0.3",
+    "minimatch": "^11.0.5",
     "pixi.js": "^8.22.0",
     "preact": "^10.29.8",
     "preact-render-to-string": "^6.8.2",
@@ -71,7 +71,7 @@
     "rehype-citation": "^2.3.2",
     "rehype-katex": "^7.0.1",
     "rehype-mathjax": "^7.1.0",
-    "rehype-pretty-code": "^0.14.5",
+    "rehype-pretty-code": "^0.14.6",
     "rehype-raw": "^7.0.0",
     "rehype-sanitize": "^6.0.0",
     "rehype-slug": "^6.0.0",
@@ -85,9 +85,9 @@
     "remark-smartypants": "^3.0.3",
     "rfdc": "^1.4.1",
     "satori": "^0.63.2",
-    "serve-handler": "^6.1.7",
+    "serve-handler": "^6.1.8",
     "sharp": "^0.35.5",
-    "shiki": "^4.5.0",
+    "shiki": "^4.6.0",
     "source-map-support": "^0.5.21",
     "to-vfile": "^8.0.0",
     "toml": "^5.0.1",
@@ -95,7 +95,7 @@
     "unist-util-visit": "^5.2.0",
     "vfile": "^6.0.3",
     "workerpool": "^10.0.3",
-    "ws": "^8.22.0",
+    "ws": "^8.22.1",
     "yargs": "^18.2.0"
   },
   "devDependencies": {