`sp = SP(u, select, verbose=True)
sp.run(start=1, stop=25000, residues="SOL")
tau_timeseries = sp.tau_timeseries
sp_timeseries = sp.sp_timeseries
for tau, sp in zip(tau_timeseries, sp_timeseries):
print("{time} {sp}".format(time=tau, sp=sp))`
If i use sp.run() and define the start and final frames, then it prints out for 20 taus, is it calculating over the whole trajectory or for the first 20 taus as I understand from the formula of Survival probability. and say I have 25000 frames should I use the "steps" and "tau_max" option in the sp.run option to calculate over the whole trajectory.
`sp = SP(u, select, verbose=True)
sp.run(start=1, stop=25000, residues="SOL")
tau_timeseries = sp.tau_timeseries
sp_timeseries = sp.sp_timeseries
for tau, sp in zip(tau_timeseries, sp_timeseries):
print("{time} {sp}".format(time=tau, sp=sp))`
If i use sp.run() and define the start and final frames, then it prints out for 20 taus, is it calculating over the whole trajectory or for the first 20 taus as I understand from the formula of Survival probability. and say I have 25000 frames should I use the "steps" and "tau_max" option in the sp.run option to calculate over the whole trajectory.