-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathtest.py
More file actions
214 lines (177 loc) · 7.06 KB
/
test.py
File metadata and controls
214 lines (177 loc) · 7.06 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
import argparse
import json
import logging
import os
import torch
from torch.utils.data import DataLoader, SequentialSampler
from tqdm import tqdm
# Local imports
from models.flexible_model import RACEModel, FlexibleBaselineModel
from utils.flexible_dataset import FlexibleGraphDataset
from utils.metrics import compute_classification_metrics
def get_args_parser():
"""
Parses command-line arguments for the testing script.
"""
parser = argparse.ArgumentParser("RACE Testing Script", add_help=False)
parser.add_argument(
"--config",
type=str,
required=True,
help="Path to the JSON configuration file for testing.",
)
parser.add_argument(
"--checkpoint_path",
type=str,
required=True,
help="Full path to the trained model checkpoint.",
)
# Optional override for the number of workers, can also be in the config.
parser.add_argument("--num_workers", default=None, type=int)
return parser
def main(config):
"""
Main function to run the evaluation.
"""
logging.basicConfig(level=logging.INFO)
logger = logging.getLogger(__name__)
# --- Setup ---
if not os.path.exists(config.checkpoint_path):
logger.error(f"Checkpoint not found at {config.checkpoint_path}. Aborting.")
return
device = torch.device(config.device if torch.cuda.is_available() else "cpu")
logger.info(f"Using device: {device}")
# --- Load Configuration from Checkpoint ---
checkpoint = torch.load(config.checkpoint_path, map_location="cpu")
train_args = checkpoint.get("args") # This is a dict of the original training args
train_graph_config = checkpoint.get("config") # This is the graph_config dict
if not train_args or not train_graph_config:
logger.error(
"Training arguments ('args') or graph config ('config') not found in checkpoint."
)
return
logger.info("Loading model and data configuration from checkpoint...")
# The test config file can provide a 'graph' object for overrides
graph_config_from_test = config.graph if hasattr(config, "graph") else {}
# Merge, with test-time config taking precedence
final_graph_config = {**train_graph_config, **graph_config_from_test}
logger.info(
f"Final Graph Configuration: {json.dumps(final_graph_config, indent=2)}"
)
# --- Data Loading ---
if not hasattr(config, "test_data_path"):
logger.error("`test_data_path` not specified in the test config file.")
return
test_data_path = config.test_data_path
dataset_test = FlexibleGraphDataset(
file_path=test_data_path, config=final_graph_config
)
sampler_test = SequentialSampler(dataset_test)
dataloader_test = DataLoader(
dataset_test,
batch_size=getattr(config, "batch_size", 16),
sampler=sampler_test,
collate_fn=FlexibleGraphDataset.collate_fn,
num_workers=getattr(config, "num_workers", 0),
)
logger.info(f"Test data loaded from: {test_data_path}")
# --- Model Preparation ---
# Load metadata from the checkpoint to ensure consistency
metadata = checkpoint.get("metadata")
if not metadata:
logger.error("Metadata not found in checkpoint. Aborting.")
return
logger.info("Metadata loaded from checkpoint.")
model_type = train_args.get("model_type", "gnn")
if model_type == "baseline":
logger.info("Initializing FlexibleBaselineModel.")
model = FlexibleBaselineModel(
feature_dim=train_args["feature_dim"],
gnn_hidden_dim=train_args["gnn_hidden_dim"],
num_heads=train_args["num_heads"],
num_classes=train_args["num_classes"],
config=final_graph_config,
metadata=metadata,
output_features=True,
)
else:
logger.info(
f"Initializing RACEModel for model_type='{model_type}'."
)
model = RACEModel(
feature_dim=train_args["feature_dim"],
gnn_hidden_dim=train_args["gnn_hidden_dim"],
num_heads=train_args["num_heads"],
num_classes=train_args["num_classes"],
config=final_graph_config,
metadata=metadata,
output_features=True,
)
model.load_state_dict(checkpoint["model_state_dict"])
model.to(device)
model.eval()
logger.info(f"Model loaded successfully from {config.checkpoint_path}")
# --- Evaluation Loop ---
all_logits = []
all_labels = []
all_features = []
all_ids = []
with torch.no_grad():
for batch_idx, batch in enumerate(tqdm(dataloader_test, desc="Evaluating")):
outputs = model(batch, batch_idx=batch_idx)
if isinstance(outputs, dict):
logits = outputs["logits"]
if "features" in outputs:
all_features.append(outputs["features"].cpu())
else:
logits = outputs
all_logits.append(logits.cpu())
all_labels.append(batch["labels"].cpu())
all_ids.extend(batch["id"])
all_logits = torch.cat(all_logits)
all_labels = torch.cat(all_labels)
final_features = torch.cat(all_features) if all_features else None
# --- Results ---
test_metrics = compute_classification_metrics(all_logits, all_labels)
formatted_metrics = {
k: f"{v:.4f}" for k, v in test_metrics.items() if k != "classification_report"
}
logger.info(
f"--- Test Results --- \n{test_metrics.get('classification_report', '')}"
)
logger.info(f"Summary Metrics: {json.dumps(formatted_metrics, indent=2)}")
# --- Save Predictions & Metrics ---
output_dir = os.path.dirname(config.checkpoint_path)
predictions = []
for i, group_id in enumerate(all_ids):
pred_entry = {
"id": group_id,
"logits": all_logits[i].tolist(),
"prediction": torch.argmax(all_logits[i]).item(),
}
if final_features is not None:
pred_entry["features"] = final_features[i].tolist()
predictions.append(pred_entry)
predictions_path = os.path.join(output_dir, "test_predictions.json")
metrics_path = os.path.join(output_dir, "test_metrics.json")
with open(predictions_path, "w") as f:
json.dump(predictions, f, indent=2)
with open(metrics_path, "w") as f:
json.dump(test_metrics, f, indent=2)
logger.info(f"Saved test predictions to {predictions_path}")
logger.info(f"Saved test metrics to {metrics_path}")
if __name__ == "__main__":
parser = get_args_parser()
cli_args = parser.parse_args()
# Load config from the specified JSON file
with open(cli_args.config, "r") as f:
config_dict = json.load(f)
# Create a namespace object for easy access
config = argparse.Namespace(**config_dict)
# Add/override config with CLI arguments
config.checkpoint_path = cli_args.checkpoint_path
if cli_args.num_workers is not None:
config.num_workers = cli_args.num_workers
if not hasattr(config, "device"):
config.device = "cuda"
main(config)