Apis_cerana,GCF_001442555.1
Fails, but datasets will download the correct files.
datasets download genome accession "$ACC"
--include genome,gff3
--filename "$ZIPFILE" >/dev/null 2>&1; then
zip_ok=1
Can test this in: https://github.com/chriswyatt1/genome_test
So, we could make a new module to use datasets instead or after trying ncbi-genome-download. As a fall back.
Apis_cerana,GCF_001442555.1
Fails, but datasets will download the correct files.
datasets download genome accession "$ACC"
--include genome,gff3
--filename "$ZIPFILE" >/dev/null 2>&1; then
zip_ok=1
Can test this in: https://github.com/chriswyatt1/genome_test
So, we could make a new module to use datasets instead or after trying ncbi-genome-download. As a fall back.