Ubuntu_setup.bash

#install the basics
echo 'basic upgrades'
sudo apt-get -y update
sudo apt-get -y dist-upgrade
sudo apt-get -y install wget graphviz


##to install with pip
#echo 'python3 upgrade'
sudo apt-get -y install python3 python3-dev build-essential cd-hit
#echo 'pip3 install'
sudo apt-get -y install python3-pip 

#install python packages
echo 'python package install'
sudo pip3 install graphviz pydot tqdm biopython pandas scipy matplotlib scikit-learn
sudo apt-get -y install python-numpy

##installing tensorflow
echo 'tensorflow install'
sudo pip3 install tensorflow tensorflow-model-optimization