Paired-end and single-end statistics need `note` or `caution` -style admonishments across tools describing the behavior of single vs paired end data inputs where applicable: - [ ] Single end statistics (BAM Statistics) - [ ] Paired end statistics (BAM Statistics) - [ ] Tag Pileup (Read Analysis) - doesn't have to be admonishment, could be embedded in Read Encoding section - [ ] BAM to BED (BAM Format Converter) - [ ] BAM to GFF (BAM Format Converter) - [ ] BAM to bedGraph (BAM Format Converter) - [ ] BAM to scIDX (BAM Format Converter)