Installation from pip fails with python 3.10 fails

[nbrucy]

Thank you for developing turbustat.

When trying to install turbustat within a python 3.10 environment from pip, I get the following error:

      Collecting cython==0.29.14
        Downloading Cython-0.29.14.tar.gz (2.1 MB)
           ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.1/2.1 MB 11.0 MB/s eta 0:00:00
        Preparing metadata (setup.py): started
        Preparing metadata (setup.py): finished with status 'error'
        error: subprocess-exited-with-error
      
        × python setup.py egg_info did not run successfully.
        │ exit code: 1
        ╰─> [>50 lines of output]
            AttributeError: module 'collections' has no attribute 'Iterable'
            [end of output]

If I follow https://stackoverflow.com/questions/72371859/attributeerror-module-collections-has-no-attribute-iterable and add from _collections_abc import Iterable in {python_env_dir}/lib/collections/__init__.py I run into another error:

Building wheels for collected packages: turbustat
  Building wheel for turbustat (pyproject.toml) ... error
  error: subprocess-exited-with-error
  
  × Building wheel for turbustat (pyproject.toml) did not run successfully.
  │ exit code: -11
  ╰─> [>131 lines of output]
 running build_ext
      cythoning ./turbustat/simulator/spectrum.pyx to ./turbustat/simulator/spectrum.c
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for turbustat
Failed to build turbustat
ERROR: Could not build wheels for turbustat, which is required to install pyproject.toml-based projects

The installation through the git repo or with python 3.7 works well.

Cheers,

Noé.

[e-koch]

thanks @nbrucy ! This is likely a weird interaction happening further upstream that I think I can track down.

Glad to hear 3.7 is working (I think 3.8 and 3.9 should be fine as well) and it's not an immediate blocker.

[CastleStar14654]

As for installing ver 1.2.1 on Python 3.10, simply removing ==0.29.14 from pyproject.toml works for me. But I do not know whether other bug would be introduced.