diff --git a/properties.json b/properties.json index 238e430..cba0d77 100644 --- a/properties.json +++ b/properties.json @@ -1,5 +1,8 @@ { "features": { + "brain_region": { + "name": "Brain" + }, "cervical_region": { "name": "Cervical C1-C7" }, @@ -8,196 +11,172 @@ }, "marker_10001": { "colour": "orange", - "label": "Label 'right level of superior border of jugular foramen on the vagus nerve' for term 'UBERON:9991211' was not found during lookup.", - "models": "UBERON:9991211" + "label": "Label 'left level of superior border of jugular foramen on the vagus nerve' for term 'UBERON:9949509' was not found during lookup.", + "models": "UBERON:9949509" }, "marker_10002": { "colour": "orange", - "label": "Label 'right level of inferior border of jugular foramen on the vagus nerve' for term 'UBERON:9915416' was not found during lookup.", - "models": "UBERON:9915416" + "label": "Label 'left level of inferior border of jugular foramen on the vagus nerve' for term 'UBERON:9908705' was not found during lookup.", + "models": "UBERON:9908705" }, "marker_10003": { "colour": "orange", - "label": "Label 'right level of angle of the mandible on the vagus nerve' for term 'UBERON:9982303' was not found during lookup.", - "models": "UBERON:9982303" + "label": "Label 'left level of angle of the mandible on the vagus nerve' for term 'UBERON:9947991' was not found during lookup.", + "models": "UBERON:9947991" }, "marker_10004": { "colour": "orange", - "label": "Label 'right level of carotid bifurcation on the vagus nerve' for term 'UBERON:9952601' was not found during lookup.", - "models": "UBERON:9952601" + "label": "Label 'left level of carotid bifurcation on the vagus nerve' for term 'UBERON:9995422' was not found during lookup.", + "models": "UBERON:9995422" }, "marker_10005": { "colour": "orange", - "label": "Label 'right level of laryngeal prominence on the vagus nerve' for term 'UBERON:9908557' was not found during lookup.", - "models": "UBERON:9908557" + "label": "Label 'left level of laryngeal prominence on the vagus nerve' for term 'UBERON:9917823' was not found during lookup.", + "models": "UBERON:9917823" }, "marker_10006": { "colour": "orange", - "label": "Label 'right level of superior border of the clavicle on the vagus nerve' for term 'UBERON:9930332' was not found during lookup.", - "models": "UBERON:9930332" + "label": "Label 'left level of superior border of the clavicle on the vagus nerve' for term 'UBERON:9943310' was not found during lookup.", + "models": "UBERON:9943310" }, "marker_10007": { "colour": "orange", - "label": "Label 'right level of jugular notch on the vagus nerve' for term 'UBERON:9944241' was not found during lookup.", - "models": "UBERON:9944241" + "label": "Label 'left level of jugular notch on the vagus nerve' for term 'UBERON:9908627' was not found during lookup.", + "models": "UBERON:9908627" }, "marker_10008": { "colour": "orange", - "label": "Label 'right level of sternal angle on the vagus nerve' for term 'UBERON:9926355' was not found during lookup.", - "models": "UBERON:9926355" + "label": "Label 'left level of sternal angle on the vagus nerve' for term 'UBERON:9904736' was not found during lookup.", + "models": "UBERON:9904736" }, "nerve_feature_01": { - "label": "Label 'branch A between right thoracic vagus trunk and tracheo-esophageal plexus' for term 'http://uri.interlex.org/base/ilx_0796659' was not found during lookup." + "label": "Label 'anterior branch of left recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0795071' was not found during lookup." }, "nerve_feature_02": { - "label": "Label 'branch B between right thoracic vagus trunk and tracheo-esophageal plexus' for term 'http://uri.interlex.org/base/ilx_0796660' was not found during lookup." + "label": "Label 'branch of left vagus nerve to carotid body' for term 'http://uri.interlex.org/base/ilx_0791085' was not found during lookup." }, "nerve_feature_03": { - "label": "Label 'branch C between right thoracic vagus trunk and tracheo-esophageal plexus' for term 'http://uri.interlex.org/base/ilx_0796661' was not found during lookup." + "label": "Label 'cardiac branch of left vagus to deep cardiac plexus' for term 'http://uri.interlex.org/base/ilx_0795087' was not found during lookup." + }, + "nerve_feature_04": { + "label": "Label 'celiac branch of posterior vagal trunk' for term 'http://uri.interlex.org/base/ilx_0789580' was not found during lookup." }, "nerve_feature_05": { - "label": "Label 'cardiovascular and cardiopulmonary branch of right vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795935' was not found during lookup." + "label": "Label 'communicating branch of auricular branch of left vagus nerve with left facial nerve' for term 'http://uri.interlex.org/base/ilx_0787673' was not found during lookup." + }, + "nerve_feature_06": { + "label": "Label 'communicating branch of auricular branch of left vagus nerve with left posterior auricular nerve' for term 'http://uri.interlex.org/base/ilx_0786219' was not found during lookup." }, - "nerve_feature_09": { - "label": "Label 'right A branch between cervical vagus nerve and a 'branch between cervical vagus nerve and cervical vagus nerve'' for term 'http://uri.interlex.org/base/ilx_0794822' was not found during lookup." + "nerve_feature_07": { + "label": "Label 'communicating branch of left external laryngeal nerve with left superior cardiac nerve' for term 'http://uri.interlex.org/base/ilx_0787107' was not found during lookup." + }, + "nerve_feature_08": { + "label": "Label 'communicating branch of left internal laryngeal nerve with left recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0789900' was not found during lookup." }, "nerve_feature_10": { - "label": "Label 'right A branch of thoracic vagus nerve to esophagus' for term 'http://uri.interlex.org/base/ilx_0794300' was not found during lookup." + "label": "Label 'esophageal branch of left recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0791513' was not found during lookup." }, "nerve_feature_11": { - "label": "Label 'right A branch of vagus nerve to ipsilateral carotid bifurcation' for term 'http://uri.interlex.org/base/ilx_0794090' was not found during lookup." + "label": "Label 'external branch of left inferior laryngeal nerve' for term '' was not found during lookup." }, "nerve_feature_12": { - "label": "Label 'right A branch of vagus nerve to ipsilateral carotid sinus' for term 'http://uri.interlex.org/base/ilx_0794109' was not found during lookup." + "label": "Label 'extra laryngeal branch of left recurrent laryngeal nerve to larynx' for term 'http://uri.interlex.org/base/ilx_0795069' was not found during lookup." }, "nerve_feature_13": { - "label": "Label 'right A branch of vagus nerve to ipsilateral internal carotid artery' for term 'http://uri.interlex.org/base/ilx_0795806' was not found during lookup." + "label": "Label 'greater posterior gastric nerve' for term 'http://uri.interlex.org/base/ilx_0788809' was not found during lookup." }, "nerve_feature_14": { - "label": "Label 'right A branch of vagus nerve to ipsilateral internal jugular vein' for term 'http://uri.interlex.org/base/ilx_0794078' was not found during lookup." + "label": "Label 'inferior branch of left internal laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0785467' was not found during lookup." }, "nerve_feature_15": { - "label": "Label 'right A lateral pulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794278' was not found during lookup." + "label": "Label 'inferior cervical cardiac branch of left recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0794244' was not found during lookup." }, "nerve_feature_16": { - "label": "Label 'right A thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794181' was not found during lookup." + "label": "Label 'inferior cervical cardiac branch of left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0786047' was not found during lookup." }, "nerve_feature_17": { - "label": "Label 'right B branch between cervical vagus nerve and a 'branch between cervical vagus nerve and cervical vagus nerve'' for term 'http://uri.interlex.org/base/ilx_0794823' was not found during lookup." + "label": "Label 'left A cervical cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794160' was not found during lookup." }, "nerve_feature_18": { - "label": "Label 'right B branch of thoracic vagus nerve to esophagus' for term 'http://uri.interlex.org/base/ilx_0794301' was not found during lookup." + "label": "Label 'left B cervical cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794161' was not found during lookup." }, "nerve_feature_19": { - "label": "Label 'right B branch of vagus nerve to ipsilateral carotid bifurcation' for term 'http://uri.interlex.org/base/ilx_0794091' was not found during lookup." + "label": "Label 'left auricular branch of left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0789344' was not found during lookup." }, "nerve_feature_20": { - "label": "Label 'right B branch of vagus nerve to ipsilateral carotid sinus' for term 'http://uri.interlex.org/base/ilx_0794110' was not found during lookup." + "label": "Label 'left branch between vagus nerve and glossopharyngeal nerve' for term 'http://uri.interlex.org/base/ilx_0790685' was not found during lookup." }, "nerve_feature_21": { - "label": "Label 'right B branch of vagus nerve to ipsilateral internal carotid artery' for term 'http://uri.interlex.org/base/ilx_0795807' was not found during lookup." + "label": "Label 'left branch between vagus nerve and superior cervical ganglion' for term 'http://uri.interlex.org/base/ilx_0794061' was not found during lookup." }, "nerve_feature_22": { - "label": "Label 'right B branch of vagus nerve to ipsilateral internal jugular vein' for term 'http://uri.interlex.org/base/ilx_0794079' was not found during lookup." - }, - "nerve_feature_23": { - "label": "Label 'right B lateral pulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794279' was not found during lookup." + "label": "Label 'left branch of left vagus nerve to esophageal nerve plexus' for term 'http://uri.interlex.org/base/ilx_0794310' was not found during lookup." }, "nerve_feature_24": { - "label": "Label 'right B thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794182' was not found during lookup." + "label": "Label 'left cervical vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794142' was not found during lookup." }, "nerve_feature_25": { - "label": "Label 'right C branch of vagus nerve to ipsilateral carotid bifurcation' for term 'http://uri.interlex.org/base/ilx_0794092' was not found during lookup." + "label": "Label 'left external laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0789760' was not found during lookup." }, "nerve_feature_26": { - "label": "Label 'right C branch of vagus nerve to ipsilateral internal jugular vein' for term 'http://uri.interlex.org/base/ilx_0794080' was not found during lookup." + "label": "Label 'left internal laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0791167' was not found during lookup." }, "nerve_feature_27": { - "label": "Label 'right C lateral pulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794280' was not found during lookup." + "label": "Label 'left meningeal branch of left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0792358' was not found during lookup." }, "nerve_feature_28": { - "label": "Label 'right C thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794183' was not found during lookup." + "label": "Label 'left pharyngeal branch of left vagus nerve to pharyngeal nerve plexus' for term 'http://uri.interlex.org/base/ilx_0789210' was not found during lookup." }, "nerve_feature_29": { - "label": "Label 'right D lateral pulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794281' was not found during lookup." + "label": "Label 'left pharyngeal branch of left vagus nerve to superior cervical ganglion' for term 'http://uri.interlex.org/base/ilx_0795067' was not found during lookup." }, "nerve_feature_30": { - "label": "Label 'right D thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794184' was not found during lookup." + "label": "Label 'left pulmonary branch A of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795079' was not found during lookup." }, "nerve_feature_31": { - "label": "Label 'right E lateral pulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794282' was not found during lookup." + "label": "Label 'left pulmonary branch B of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795080' was not found during lookup." }, "nerve_feature_32": { - "label": "Label 'right E thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794185' was not found during lookup." + "label": "Label 'left pulmonary branch C of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795081' was not found during lookup." }, "nerve_feature_33": { - "label": "Label 'right F thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794186' was not found during lookup." - }, - "nerve_feature_34": { - "label": "Label 'right G thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794187' was not found during lookup." + "label": "Label 'left pulmonary branch D of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795082' was not found during lookup." }, "nerve_feature_35": { - "label": "Label 'right H thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794188' was not found during lookup." + "label": "Label 'left recurrent laryngeal nerve' for term 'http://purl.obolibrary.org/obo/UBERON_0011766' was not found during lookup." }, "nerve_feature_36": { - "label": "Label 'right I thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794189' was not found during lookup." + "label": "Label 'left superior laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0788780' was not found during lookup." }, "nerve_feature_37": { - "label": "Label 'right J thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794190' was not found during lookup." + "label": "Label 'left thoracic vagus nerve' for term 'http://uri.interlex.org/base/ilx_0787543' was not found during lookup." }, "nerve_feature_38": { - "label": "Label 'right K thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795967' was not found during lookup." + "label": "Label 'left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0785628' was not found during lookup." }, "nerve_feature_39": { - "label": "Label 'right L thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795968' was not found during lookup." - }, - "nerve_feature_40": { - "label": "Label 'right M thoracic cardiopulmonary branch of vagus nerve' for term 'http://uri.interlex.org/base/ilx_0795969' was not found during lookup." + "label": "Label 'lingual branch of left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0791548' was not found during lookup." }, "nerve_feature_41": { - "label": "Label 'right auricular branch of right vagus nerve' for term 'http://uri.interlex.org/base/ilx_0785879' was not found during lookup." + "label": "Label 'middle branch of left internal laryngeal nerve' for term '' was not found during lookup." }, "nerve_feature_43": { - "label": "Label 'right branch of cervical vagus nerve to sympathetic chain, cardiovascular, and pulmonary structures' for term 'http://uri.interlex.org/base/ilx_0796411' was not found during lookup." - }, - "nerve_feature_47": { - "label": "Label 'right branch of vagus nerve to ipsilateral common carotid artery' for term 'http://uri.interlex.org/base/ilx_0794068' was not found during lookup." - }, - "nerve_feature_50": { - "label": "Label 'right branch to thryoid gland from the cervical vagus' for term 'http://uri.interlex.org/base/ilx_0796538' was not found during lookup." + "label": "Label 'posterior branch of left recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0795073' was not found during lookup." }, - "nerve_feature_51": { - "label": "Label 'right cardiovascular branch of cervical vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794846' was not found during lookup." + "nerve_feature_44": { + "label": "Label 'pyloric branch of greater posterior gastric nerve' for term 'http://uri.interlex.org/base/ilx_0794460' was not found during lookup." }, - "nerve_feature_52": { - "label": "Label 'right cardiovascular branch of cranial nerve bundle' for term 'http://uri.interlex.org/base/ilx_0795539' was not found during lookup." + "nerve_feature_45": { + "label": "Label 'superior branch of left internal laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0785786' was not found during lookup." }, - "nerve_feature_53": { - "label": "Label 'right cervical vagus nerve' for term 'http://uri.interlex.org/base/ilx_0794141' was not found during lookup." + "nerve_feature_46": { + "label": "Label 'superior cervical cardiac branch of left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0791998' was not found during lookup." }, - "nerve_feature_54": { - "label": "Label 'right fusion with superior cervical ganglion' for term 'http://uri.interlex.org/base/ilx_0795754' was not found during lookup." - }, - "nerve_feature_55": { - "label": "Label 'right glossopharyngeal nerve' for term 'http://uri.interlex.org/base/ilx_0791729' was not found during lookup." - }, - "nerve_feature_56": { - "label": "Label 'right hypoglossal nerve' for term 'http://uri.interlex.org/base/ilx_0790245' was not found during lookup." - }, - "nerve_feature_58": { - "label": "Label 'right recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0794225' was not found during lookup." - }, - "nerve_feature_59": { - "label": "Label 'right spinal accessory nerve' for term 'http://uri.interlex.org/base/ilx_0785210' was not found during lookup." - }, - "nerve_feature_60": { - "label": "Label 'right superior laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0787738' was not found during lookup." - }, - "nerve_feature_62": { - "label": "Label 'right thoracic vagus nerve' for term 'http://uri.interlex.org/base/ilx_0786664' was not found during lookup." + "nerve_feature_47": { + "label": "Label 'thoracic cardiac branch of left vagus nerve' for term 'http://uri.interlex.org/base/ilx_0791489' was not found during lookup." }, - "nerve_feature_63": { - "label": "Label 'right vagus nerve' for term 'http://uri.interlex.org/base/ilx_0789705' was not found during lookup." + "nerve_feature_48": { + "label": "Label 'tracheal branch of left recurrent laryngeal nerve' for term 'http://uri.interlex.org/base/ilx_0785091' was not found during lookup." }, "thoracic_region": { "name": "Thoracic T1-T12" @@ -207,208 +186,174 @@ { "centrelines": [ { - "id": "nerve_feature_53", - "models": "http://uri.interlex.org/base/ilx_0794141" - }, - { - "id": "nerve_feature_63", - "models": "http://uri.interlex.org/base/ilx_0789705" + "id": "nerve_feature_24", + "models": "http://uri.interlex.org/base/ilx_0794142" }, { - "id": "nerve_feature_62", - "models": "http://uri.interlex.org/base/ilx_0786664" + "id": "nerve_feature_38", + "models": "http://uri.interlex.org/base/ilx_0785628" }, { - "id": "nerve_feature_01", - "models": "http://uri.interlex.org/base/ilx_0796659" + "id": "nerve_feature_37", + "models": "http://uri.interlex.org/base/ilx_0787543" }, { "id": "nerve_feature_02", - "models": "http://uri.interlex.org/base/ilx_0796660" - }, - { - "id": "nerve_feature_03", - "models": "http://uri.interlex.org/base/ilx_0796661" - }, - { - "id": "nerve_feature_05", - "models": "http://uri.interlex.org/base/ilx_0795935" + "models": "http://uri.interlex.org/base/ilx_0791085" }, { - "id": "nerve_feature_09", - "models": "http://uri.interlex.org/base/ilx_0794822" + "id": "nerve_feature_21", + "models": "http://uri.interlex.org/base/ilx_0794061" }, { - "id": "nerve_feature_10", - "models": "http://uri.interlex.org/base/ilx_0794300" + "id": "nerve_feature_03", + "models": "http://uri.interlex.org/base/ilx_0795087" }, { - "id": "nerve_feature_11", - "models": "http://uri.interlex.org/base/ilx_0794090" - }, - { - "id": "nerve_feature_12", - "models": "http://uri.interlex.org/base/ilx_0794109" + "id": "nerve_feature_04", + "models": "http://uri.interlex.org/base/ilx_0789580" }, { "id": "nerve_feature_13", - "models": "http://uri.interlex.org/base/ilx_0795806" + "models": "http://uri.interlex.org/base/ilx_0788809" }, { - "id": "nerve_feature_14", - "models": "http://uri.interlex.org/base/ilx_0794078" - }, - { - "id": "nerve_feature_15", - "models": "http://uri.interlex.org/base/ilx_0794278" + "id": "nerve_feature_44", + "models": "http://uri.interlex.org/base/ilx_0794460" }, { "id": "nerve_feature_16", - "models": "http://uri.interlex.org/base/ilx_0794181" + "models": "http://uri.interlex.org/base/ilx_0786047" }, { "id": "nerve_feature_17", - "models": "http://uri.interlex.org/base/ilx_0794823" + "models": "http://uri.interlex.org/base/ilx_0794160" }, { "id": "nerve_feature_18", - "models": "http://uri.interlex.org/base/ilx_0794301" + "models": "http://uri.interlex.org/base/ilx_0794161" }, { "id": "nerve_feature_19", - "models": "http://uri.interlex.org/base/ilx_0794091" - }, - { - "id": "nerve_feature_20", - "models": "http://uri.interlex.org/base/ilx_0794110" - }, - { - "id": "nerve_feature_21", - "models": "http://uri.interlex.org/base/ilx_0795807" - }, - { - "id": "nerve_feature_22", - "models": "http://uri.interlex.org/base/ilx_0794079" + "models": "http://uri.interlex.org/base/ilx_0789344" }, { - "id": "nerve_feature_23", - "models": "http://uri.interlex.org/base/ilx_0794279" + "id": "nerve_feature_05", + "models": "http://uri.interlex.org/base/ilx_0787673" }, { - "id": "nerve_feature_24", - "models": "http://uri.interlex.org/base/ilx_0794182" + "id": "nerve_feature_06", + "models": "http://uri.interlex.org/base/ilx_0786219" }, { - 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